Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002792-TA|BGIBMGA002792-PA|IPR008952|Tetraspanin,
IPR000301|CD9/CD37/CD63 antigen
(215 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81128-2|CAB03397.2| 232|Caenorhabditis elegans Hypothetical pr... 47 9e-06
Z78415-6|CAH60758.1| 291|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z73908-1|CAA98130.2| 230|Caenorhabditis elegans Hypothetical pr... 36 0.029
AL021487-1|CAA16352.4| 241|Caenorhabditis elegans Hypothetical ... 36 0.029
U42832-3|AAA83573.2| 361|Caenorhabditis elegans Tetraspanin fam... 34 0.068
Z47809-8|CAH10845.1| 968|Caenorhabditis elegans Hypothetical pr... 32 0.27
Z47809-6|CAD57700.1| 1124|Caenorhabditis elegans Hypothetical pr... 32 0.27
Z47809-5|CAD57699.1| 1019|Caenorhabditis elegans Hypothetical pr... 32 0.27
Z47809-4|CAA87782.1| 1016|Caenorhabditis elegans Hypothetical pr... 32 0.27
Z36719-9|CAH04695.1| 968|Caenorhabditis elegans Hypothetical pr... 32 0.27
Z36719-8|CAD57686.1| 1124|Caenorhabditis elegans Hypothetical pr... 32 0.27
Z36719-7|CAD57685.1| 1019|Caenorhabditis elegans Hypothetical pr... 32 0.27
Z36719-6|CAA85318.1| 1016|Caenorhabditis elegans Hypothetical pr... 32 0.27
U86640-1|AAB47273.1| 1016|Caenorhabditis elegans MEL-11 protein. 32 0.27
AF078784-1|AAK18967.1| 458|Caenorhabditis elegans Hypothetical ... 31 0.83
Z75531-4|CAA99805.1| 408|Caenorhabditis elegans Hypothetical pr... 29 1.9
U53332-2|AAK31532.1| 473|Caenorhabditis elegans Tetraspanin fam... 29 1.9
DQ178635-1|ABD75714.1| 361|Caenorhabditis elegans tetraspanin f... 29 1.9
AL132948-6|CAC51071.1| 321|Caenorhabditis elegans Hypothetical ... 29 2.5
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z81086-1|CAB03120.2| 258|Caenorhabditis elegans Hypothetical pr... 28 4.4
U41545-5|AAK39137.2| 243|Caenorhabditis elegans Tetraspanin fam... 27 7.8
>Z81128-2|CAB03397.2| 232|Caenorhabditis elegans Hypothetical
protein T23D8.2 protein.
Length = 232
Score = 47.2 bits (107), Expect = 9e-06
Identities = 39/167 (23%), Positives = 74/167 (44%), Gaps = 17/167 (10%)
Query: 33 ILLLMMAIITCSIAWIGWRTAVSXXXXXXXXXXXXXXXXXXXEFTCFVWAMVVWDNVEID 92
ILLL++ + + ++G A+ E + + D+ +
Sbjct: 54 ILLLVIGSLCTLLGFLGCCGAIRENYCLTVSFAVLLALLITCEIAAVIIGYALHDSFRLG 113
Query: 93 V----KTTMTQFFEDTRGADANSAESLKWDRLHVKFECCGVTGPNDYATSGHVPFSCCGQ 148
+ +T M ++ E +RG ++ WD+ H FECCGVT +D+ T +P SCC
Sbjct: 114 IGNQLQTGMVRYHE-SRGVES------AWDKTHQLFECCGVTNSSDWLTFTTIPDSCC-- 164
Query: 149 GPLDSLHKPYASECAALYLRGCGKQLHEYT-RQQLMLVSMTALCASI 194
++ + + A E A L+ GC + ++ + M+ + A+ A+I
Sbjct: 165 --IEEI-EGCARENAPLFEPGCIHSVEQWVLKNGAMVGGICAVLAAI 208
>Z78415-6|CAH60758.1| 291|Caenorhabditis elegans Hypothetical
protein C17G1.8 protein.
Length = 291
Score = 37.5 bits (83), Expect = 0.007
Identities = 24/94 (25%), Positives = 40/94 (42%), Gaps = 11/94 (11%)
Query: 114 SLKWDRLHVKFECCGVTGPNDYATSGH------VPFSCCGQGPLDSLH-----KPYASEC 162
SL WD L + +CCGV D+ S H P SCC D+ + E
Sbjct: 134 SLTWDHLQRELQCCGVDNYTDWHYSVHWPNNLYTPDSCCDPQHFDAENGTENCGKLPDEQ 193
Query: 163 AALYLRGCGKQLHEYTRQQLMLVSMTALCASIIQ 196
+ LY +GC + ++ ++LV+ +++
Sbjct: 194 SLLYQKGCFPKFSDWLYHHIILVNWVTSILFVVE 227
>Z73908-1|CAA98130.2| 230|Caenorhabditis elegans Hypothetical
protein F53B2.2 protein.
Length = 230
Score = 35.5 bits (78), Expect = 0.029
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 110 NSAESLKWDRLHVKFECCGVTGPNDYATSGHVPFSC-CG 147
NS D +H +CCG G D+ +G+ P SC CG
Sbjct: 130 NSRTKNTLDWVHTSLKCCGANGCEDFLPAGNFPTSCECG 168
>AL021487-1|CAA16352.4| 241|Caenorhabditis elegans Hypothetical
protein Y45F10B.1 protein.
Length = 241
Score = 35.5 bits (78), Expect = 0.029
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 110 NSAESLKWDRLHVKFECCGVTGPNDYATSGHVPFSC-CG 147
NS D +H +CCG G D+ +G+ P SC CG
Sbjct: 141 NSRTKNTLDWVHTSLKCCGANGCEDFLPAGNFPTSCECG 179
>U42832-3|AAA83573.2| 361|Caenorhabditis elegans Tetraspanin family
protein 16 protein.
Length = 361
Score = 34.3 bits (75), Expect = 0.068
Identities = 19/76 (25%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
Query: 116 KWDRLHVKFECCGVTGPNDYATSGHVPFSCCGQGPLDSLHKPYASECAALYLRGCGKQLH 175
+W++ H +F+CCGV D+ S + + P + + CA ++ R C
Sbjct: 222 EWNKAHRQFKCCGVRNLTDFVESKW--YIMQKKHPRQRIPDSCCASCATMHERFCVAFFK 279
Query: 176 EYTRQQLMLVSMTALC 191
E Q LV +C
Sbjct: 280 EPGNQPHQLVKNQTIC 295
>Z47809-8|CAH10845.1| 968|Caenorhabditis elegans Hypothetical
protein C06C3.1d protein.
Length = 968
Score = 32.3 bits (70), Expect = 0.27
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Query: 77 TCFVWAMVVWDNVEIDVKTTMTQFFEDTRGADANSAESLKWDRLHVKFECCG 128
TC V + ID K M +F + +GAD N+ ++ W LH CCG
Sbjct: 83 TCTVDGLTALHQSVIDSKPEMVRFLCE-KGADVNAQDNEGWTPLHAA-ACCG 132
>Z47809-6|CAD57700.1| 1124|Caenorhabditis elegans Hypothetical
protein C06C3.1c protein.
Length = 1124
Score = 32.3 bits (70), Expect = 0.27
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Query: 77 TCFVWAMVVWDNVEIDVKTTMTQFFEDTRGADANSAESLKWDRLHVKFECCG 128
TC V + ID K M +F + +GAD N+ ++ W LH CCG
Sbjct: 83 TCTVDGLTALHQSVIDSKPEMVRFLCE-KGADVNAQDNEGWTPLHAA-ACCG 132
>Z47809-5|CAD57699.1| 1019|Caenorhabditis elegans Hypothetical
protein C06C3.1b protein.
Length = 1019
Score = 32.3 bits (70), Expect = 0.27
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Query: 77 TCFVWAMVVWDNVEIDVKTTMTQFFEDTRGADANSAESLKWDRLHVKFECCG 128
TC V + ID K M +F + +GAD N+ ++ W LH CCG
Sbjct: 83 TCTVDGLTALHQSVIDSKPEMVRFLCE-KGADVNAQDNEGWTPLHAA-ACCG 132
>Z47809-4|CAA87782.1| 1016|Caenorhabditis elegans Hypothetical
protein C06C3.1a protein.
Length = 1016
Score = 32.3 bits (70), Expect = 0.27
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Query: 77 TCFVWAMVVWDNVEIDVKTTMTQFFEDTRGADANSAESLKWDRLHVKFECCG 128
TC V + ID K M +F + +GAD N+ ++ W LH CCG
Sbjct: 83 TCTVDGLTALHQSVIDSKPEMVRFLCE-KGADVNAQDNEGWTPLHAA-ACCG 132
>Z36719-9|CAH04695.1| 968|Caenorhabditis elegans Hypothetical
protein C06C3.1d protein.
Length = 968
Score = 32.3 bits (70), Expect = 0.27
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Query: 77 TCFVWAMVVWDNVEIDVKTTMTQFFEDTRGADANSAESLKWDRLHVKFECCG 128
TC V + ID K M +F + +GAD N+ ++ W LH CCG
Sbjct: 83 TCTVDGLTALHQSVIDSKPEMVRFLCE-KGADVNAQDNEGWTPLHAA-ACCG 132
>Z36719-8|CAD57686.1| 1124|Caenorhabditis elegans Hypothetical
protein C06C3.1c protein.
Length = 1124
Score = 32.3 bits (70), Expect = 0.27
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Query: 77 TCFVWAMVVWDNVEIDVKTTMTQFFEDTRGADANSAESLKWDRLHVKFECCG 128
TC V + ID K M +F + +GAD N+ ++ W LH CCG
Sbjct: 83 TCTVDGLTALHQSVIDSKPEMVRFLCE-KGADVNAQDNEGWTPLHAA-ACCG 132
>Z36719-7|CAD57685.1| 1019|Caenorhabditis elegans Hypothetical
protein C06C3.1b protein.
Length = 1019
Score = 32.3 bits (70), Expect = 0.27
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Query: 77 TCFVWAMVVWDNVEIDVKTTMTQFFEDTRGADANSAESLKWDRLHVKFECCG 128
TC V + ID K M +F + +GAD N+ ++ W LH CCG
Sbjct: 83 TCTVDGLTALHQSVIDSKPEMVRFLCE-KGADVNAQDNEGWTPLHAA-ACCG 132
>Z36719-6|CAA85318.1| 1016|Caenorhabditis elegans Hypothetical
protein C06C3.1a protein.
Length = 1016
Score = 32.3 bits (70), Expect = 0.27
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Query: 77 TCFVWAMVVWDNVEIDVKTTMTQFFEDTRGADANSAESLKWDRLHVKFECCG 128
TC V + ID K M +F + +GAD N+ ++ W LH CCG
Sbjct: 83 TCTVDGLTALHQSVIDSKPEMVRFLCE-KGADVNAQDNEGWTPLHAA-ACCG 132
>U86640-1|AAB47273.1| 1016|Caenorhabditis elegans MEL-11 protein.
Length = 1016
Score = 32.3 bits (70), Expect = 0.27
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Query: 77 TCFVWAMVVWDNVEIDVKTTMTQFFEDTRGADANSAESLKWDRLHVKFECCG 128
TC V + ID K M +F + +GAD N+ ++ W LH CCG
Sbjct: 83 TCTVDGLTALHQSVIDSKPEMVRFLCE-KGADVNAQDNEGWTPLHAA-ACCG 132
>AF078784-1|AAK18967.1| 458|Caenorhabditis elegans Hypothetical
protein H34I24.2 protein.
Length = 458
Score = 30.7 bits (66), Expect = 0.83
Identities = 12/22 (54%), Positives = 16/22 (72%), Gaps = 2/22 (9%)
Query: 143 FSCCGQGP--LDSLHKPYASEC 162
F+C G GP LDSL++PY + C
Sbjct: 272 FNCTGSGPCQLDSLNRPYCTNC 293
>Z75531-4|CAA99805.1| 408|Caenorhabditis elegans Hypothetical
protein C54D10.4 protein.
Length = 408
Score = 29.5 bits (63), Expect = 1.9
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 11/66 (16%)
Query: 118 DRLHVKFECCGVTGPNDY-------ATSGHVPF-SCCGQG-PLDSLHKPYASECAALYLR 168
DR+ ++ CCG G DY A+ +PF S G P +SL K S C + R
Sbjct: 278 DRVQRRYCCCGYNGAIDYGFFNKTTASEDKIPFTSTLNIGCPHNSLFK--NSTCGKTHSR 335
Query: 169 GCGKQL 174
GC ++L
Sbjct: 336 GCEERL 341
>U53332-2|AAK31532.1| 473|Caenorhabditis elegans Tetraspanin family
protein 18 protein.
Length = 473
Score = 29.5 bits (63), Expect = 1.9
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 118 DRLHVKFECCGVTGPNDYATSGHV 141
DR+H+++ CCGV D+ V
Sbjct: 155 DRIHIEYSCCGVNSIEDFVDLSEV 178
>DQ178635-1|ABD75714.1| 361|Caenorhabditis elegans tetraspanin
family protein protein.
Length = 361
Score = 29.5 bits (63), Expect = 1.9
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 118 DRLHVKFECCGVTGPNDYATSGHV 141
DR+H+++ CCGV D+ V
Sbjct: 43 DRIHIEYSCCGVNSIEDFVDLSEV 66
>AL132948-6|CAC51071.1| 321|Caenorhabditis elegans Hypothetical
protein Y39B6A.6 protein.
Length = 321
Score = 29.1 bits (62), Expect = 2.5
Identities = 16/70 (22%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
Query: 77 TCFVWAMVVWDNVEIDVKTTMTQFFEDTRGADANSAESLKWDRLHVKFECCGVTGPNDYA 136
+C ++ + D +++++ + + ESL D L F CCG G +D+
Sbjct: 159 SCGIYLLYKKDGLDVELSDALNYMVQHYYQGPGVVQESL--DHLQTAFRCCGNAGCSDFR 216
Query: 137 T-SGHVPFSC 145
+P SC
Sbjct: 217 VFRQDIPRSC 226
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 28.3 bits (60), Expect = 4.4
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 126 CCGVTGPNDYATSGHVPFSCCG 147
CCG GP + ++ F+CCG
Sbjct: 51 CCGNDGPQPFNPVFNIHFNCCG 72
>Z81086-1|CAB03120.2| 258|Caenorhabditis elegans Hypothetical
protein F53B6.1 protein.
Length = 258
Score = 28.3 bits (60), Expect = 4.4
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 117 WDRLHVKFECCGVTGPND 134
WD L F+CCGV G ++
Sbjct: 148 WDALQSNFKCCGVNGTDN 165
>U41545-5|AAK39137.2| 243|Caenorhabditis elegans Tetraspanin family
protein 17 protein.
Length = 243
Score = 27.5 bits (58), Expect = 7.8
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 118 DRLHVKFECCGVTGPNDYATS 138
D+L +CCG GP DY +S
Sbjct: 116 DKLQFYEKCCGSLGPTDYISS 136
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.327 0.138 0.455
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,697,626
Number of Sequences: 27539
Number of extensions: 167788
Number of successful extensions: 522
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 510
Number of HSP's gapped (non-prelim): 24
length of query: 215
length of database: 12,573,161
effective HSP length: 78
effective length of query: 137
effective length of database: 10,425,119
effective search space: 1428241303
effective search space used: 1428241303
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 58 (27.5 bits)
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