Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002791-TA|BGIBMGA002791-PA|undefined
         (921 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    30   0.075
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    27   0.70 
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    25   3.7  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    24   4.9  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    24   4.9  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 30.3 bits (65), Expect = 0.075
 Identities = 18/51 (35%), Positives = 31/51 (60%), Gaps = 2/51 (3%)

Query: 64  YTESVIEIEYFPVNLNDPDHQLMVADSPIVVILRSVSGKGAKDVDPLLNSD 114
           +TE+V+E    P+ LN   H  ++A+SP ++IL   S   A  V+ L+++D
Sbjct: 2   FTENVVEELLSPLTLNRITH--ILANSPAIIILGQDSKAKAIVVNTLISND 50


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 27.1 bits (57), Expect = 0.70
 Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 2/49 (4%)

Query: 66  ESVIEIEYFPVNLNDPDHQLMVADSPIVVILRSVSGKGAKDVDPLLNSD 114
           E+V+E    P+ LN   H  ++A+SP ++IL   S   A  V+ L+++D
Sbjct: 42  ENVVEELLSPLTLNRITH--ILANSPAIIILGQDSKAKAIVVNTLISND 88


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 9/29 (31%), Positives = 17/29 (58%)

Query: 635 KKMRKSFELAKEWDKFLRRWIDASGEEEI 663
           K   +++EL KEW  F+  + + +  +EI
Sbjct: 266 KDQPETYELVKEWRDFVDNYAEENKRDEI 294


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 24.2 bits (50), Expect = 4.9
 Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 4/54 (7%)

Query: 540  LLTKVLRLLEEGNN----MEAKNFLLRALNVHSKNRYLLWIYGALNFDQGTEGK 589
            L T+V+   EE N+    + AKN    A ++     Y  W+ G+    +G   K
Sbjct: 1249 LYTRVVDGREELNHGKRTLPAKNTYFEATDLQQHVEYQFWVTGSTRVGEGQSSK 1302


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 24.2 bits (50), Expect = 4.9
 Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 4/54 (7%)

Query: 540  LLTKVLRLLEEGNN----MEAKNFLLRALNVHSKNRYLLWIYGALNFDQGTEGK 589
            L T+V+   EE N+    + AKN    A ++     Y  W+ G+    +G   K
Sbjct: 1245 LYTRVVDGREELNHGKRTLPAKNTYFEATDLQQHVEYQFWVTGSTRVGEGQSSK 1298


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.320    0.135    0.404 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 261,670
Number of Sequences: 429
Number of extensions: 11166
Number of successful extensions: 17
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 16
Number of HSP's gapped (non-prelim): 5
length of query: 921
length of database: 140,377
effective HSP length: 64
effective length of query: 857
effective length of database: 112,921
effective search space: 96773297
effective search space used: 96773297
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 48 (23.4 bits)