BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002791-TA|BGIBMGA002791-PA|undefined
(921 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q3ASJ4 Cluster: Exodeoxyribonuclease V, RecC subunit; n... 42 0.076
UniRef50_A7IHP8 Cluster: Tetratricopeptide TPR_2 repeat protein;... 40 0.41
UniRef50_Q2FSV7 Cluster: Tetratricopeptide TPR_2; n=1; Methanosp... 39 0.71
UniRef50_A7SXY9 Cluster: Predicted protein; n=1; Nematostella ve... 38 0.94
UniRef50_Q983G4 Cluster: Mll8338 protein; n=1; Mesorhizobium lot... 38 1.2
UniRef50_Q0ACC6 Cluster: Tetratricopeptide TPR_2 repeat protein ... 38 1.6
UniRef50_A0LL25 Cluster: Tetratricopeptide TPR_2 repeat protein;... 38 1.6
UniRef50_Q23QY5 Cluster: Leucine Rich Repeat family protein; n=1... 37 2.9
UniRef50_Q98L23 Cluster: Sarcosine dehydrogenase; n=3; Alphaprot... 36 3.8
UniRef50_Q67L83 Cluster: Putative uncharacterized protein; n=1; ... 36 3.8
UniRef50_Q2SEX0 Cluster: FOG: TPR repeat; n=1; Hahella chejuensi... 36 3.8
UniRef50_Q0EZD5 Cluster: TPR repeat; n=1; Mariprofundus ferrooxy... 36 3.8
UniRef50_Q1DGB9 Cluster: Putative uncharacterized protein; n=1; ... 36 5.0
UniRef50_Q23HD4 Cluster: TPR Domain containing protein; n=2; Tet... 36 5.0
UniRef50_UPI0000D5555B Cluster: PREDICTED: similar to CG17531-PA... 36 6.6
UniRef50_Q5UEX3 Cluster: Putative uncharacterized protein; n=1; ... 36 6.6
UniRef50_Q09CD1 Cluster: Tetratricopeptide repeat domain protein... 36 6.6
UniRef50_A7HI06 Cluster: Serine/threonine protein kinase; n=1; A... 36 6.6
UniRef50_A4MID7 Cluster: Glycosyl transferase, family 2; n=1; Ge... 36 6.6
UniRef50_Q9K7X8 Cluster: Penicillin-binding protein 1A; n=1; Bac... 35 8.7
UniRef50_Q01Z72 Cluster: Tetratricopeptide TPR_2 repeat protein ... 35 8.7
UniRef50_A6LGB8 Cluster: Putative uncharacterized protein; n=1; ... 35 8.7
>UniRef50_Q3ASJ4 Cluster: Exodeoxyribonuclease V, RecC subunit; n=4;
Chlorobium|Rep: Exodeoxyribonuclease V, RecC subunit -
Chlorobium chlorochromatii (strain CaD3)
Length = 1127
Score = 41.9 bits (94), Expect = 0.076
Identities = 31/123 (25%), Positives = 57/123 (46%), Gaps = 4/123 (3%)
Query: 539 VLLTKVLRLLEEGNNMEAKNFLLRALNVHSKNRYLLWIYGALNFDQGTEGKDLAAAAFRI 598
VL +L LLE ++ ++ ++ ++ S + Y+ ++G + G EGK + A F I
Sbjct: 378 VLYDAILGLLEAHPHISLRDIIVMTPDIESYSPYIATVFGTAR-EAGKEGKGVVALPFSI 436
Query: 599 AVRGDYSDG--TGIAIGWAALHSFYHYHQNSYAAFVAAKKMRKSFELAKEWDKFLRRWID 656
A R +G + ALH + F+A+ + ++F E + +R WI+
Sbjct: 437 ADRRMMHEGEIASALLKLLALHGS-RLTASMLFDFLASPPVSRAFGFDAEALRLIRGWIE 495
Query: 657 ASG 659
SG
Sbjct: 496 GSG 498
>UniRef50_A7IHP8 Cluster: Tetratricopeptide TPR_2 repeat protein;
n=1; Xanthobacter autotrophicus Py2|Rep:
Tetratricopeptide TPR_2 repeat protein - Xanthobacter
sp. (strain Py2)
Length = 616
Score = 39.5 bits (88), Expect = 0.41
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Query: 807 LQRAARAHKMVP-SGYSAFVLARIYNILGEKELAERWAAAAVKSEPLLSDGWAFLALLAL 865
L A RA ++ P S Y+A LA + GE + A A A+K PL D A +A + +
Sbjct: 426 LDEAERAAELAPASAYAARTLALVQLFAGEPDDAITTAEKALKLNPLDFDVAATVASVFI 485
Query: 866 HERKIDNAKAMMRTANQVGTVSNDINEALESLKA 899
+++ + M+ A + G V ++ +A + A
Sbjct: 486 GAGRVEEGEGMLMRARREGAVRTNLQDAFLGMAA 519
>UniRef50_Q2FSV7 Cluster: Tetratricopeptide TPR_2; n=1;
Methanospirillum hungatei JF-1|Rep: Tetratricopeptide
TPR_2 - Methanospirillum hungatei (strain JF-1 / DSM
864)
Length = 643
Score = 38.7 bits (86), Expect = 0.71
Identities = 23/76 (30%), Positives = 36/76 (47%)
Query: 827 ARIYNILGEKELAERWAAAAVKSEPLLSDGWAFLALLALHERKIDNAKAMMRTANQVGTV 886
AR LG+++ A+R A A K P D W L +A ++ D AK TA Q+ +
Sbjct: 387 ARAELALGKRDDAQRSATRATKLAPYSYDAWYLLGDVAAVNKQYDVAKEAFETALQINPM 446
Query: 887 SNDINEALESLKAEIN 902
D + L + ++N
Sbjct: 447 KEDAFKYLVEVMRQLN 462
>UniRef50_A7SXY9 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 367
Score = 38.3 bits (85), Expect = 0.94
Identities = 24/76 (31%), Positives = 36/76 (47%)
Query: 780 DKAGAQPCPAILLRAALGGMQSEPAVSLQRAARAHKMVPSGYSAFVLARIYNILGEKELA 839
D + ++ CP ILL+ GM P V+L A + + PS + V A++ E
Sbjct: 21 DTSWSRDCPEILLKTPCIGMLDIPLVNLGLADHTYCLPPSAITLEVFAKLQAKAMENGEL 80
Query: 840 ERWAAAAVKSEPLLSD 855
RW A++ EP SD
Sbjct: 81 LRWEDASIAFEPPNSD 96
>UniRef50_Q983G4 Cluster: Mll8338 protein; n=1; Mesorhizobium
loti|Rep: Mll8338 protein - Rhizobium loti
(Mesorhizobium loti)
Length = 559
Score = 37.9 bits (84), Expect = 1.2
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 772 CESALEEADKAGAQPCPAIL-LRAALGGMQSEPAVSLQRAARAHKMVP-SGYSAFVLARI 829
CE ++ A++AGA PAIL L L M + P L+ A R +M P +G+ + I
Sbjct: 188 CERSIRLANEAGAAQHPAILHLHIHLLEMSTMPERGLRSADRLGEMCPDAGHMNHMPGHI 247
Query: 830 YNILGEKELAERWAAAAVKSEPL 852
Y + G+ E A+ + AV++ L
Sbjct: 248 YVLCGDYEKAKIASEKAVRANDL 270
>UniRef50_Q0ACC6 Cluster: Tetratricopeptide TPR_2 repeat protein
precursor; n=1; Alkalilimnicola ehrlichei MLHE-1|Rep:
Tetratricopeptide TPR_2 repeat protein precursor -
Alkalilimnicola ehrlichei (strain MLHE-1)
Length = 955
Score = 37.5 bits (83), Expect = 1.6
Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 4/86 (4%)
Query: 776 LEEADKAGAQPCPAILLRAALGGMQSEPAVSLQRAARAHKMVPSGYSAFVLARIYNILGE 835
L+ A A A+ AA+G ++EPA S A H+ + SA A + G+
Sbjct: 152 LDRASNARLHALRAVAF-AAIG--RTEPAQSELTAVDGHESA-AALSALAEAHLALAAGD 207
Query: 836 KELAERWAAAAVKSEPLLSDGWAFLA 861
E AE W A+ ++P L W+ LA
Sbjct: 208 HEQAEHWLDQALDADPELGQAWSLLA 233
>UniRef50_A0LL25 Cluster: Tetratricopeptide TPR_2 repeat protein;
n=1; Syntrophobacter fumaroxidans MPOB|Rep:
Tetratricopeptide TPR_2 repeat protein - Syntrophobacter
fumaroxidans (strain DSM 10017 / MPOB)
Length = 318
Score = 37.5 bits (83), Expect = 1.6
Identities = 47/182 (25%), Positives = 76/182 (41%), Gaps = 7/182 (3%)
Query: 718 PDYY--YLQAASLLLRQ-EYNNAMKITHEGIKRF-GPSAILSQINASCLTCSRGWDGQCE 773
PDY ++ AS+ + ++ A ++ G++ SA LSQ L R +
Sbjct: 122 PDYAAAWVNLASIREQAGDHEEAERLFRRGVEATRDDSAPLSQYGFFLLRRDR--PAEAA 179
Query: 774 SALEEADKAGAQPCPAILLRAALGGMQSEPAVSLQRAARAHKMVPSGYSAFV-LARIYNI 832
EA K A A + E A +L+R RA + P+ + A + ARI
Sbjct: 180 EVFREALKRDASCANACFGLGEIAEKSGERAEALRRYERAARYNPTDFEARLRAARIAAS 239
Query: 833 LGEKELAERWAAAAVKSEPLLSDGWAFLALLALHERKIDNAKAMMRTANQVGTVSNDINE 892
LGE+ A AAV +P D + FL L + ++ +A+ + A + G + N
Sbjct: 240 LGERPGAIAHMQAAVALKPDRGDAFLFLGQLLREDGQMKDAERAVEEAARHGAPVAECNR 299
Query: 893 AL 894
L
Sbjct: 300 EL 301
>UniRef50_Q23QY5 Cluster: Leucine Rich Repeat family protein; n=1;
Tetrahymena thermophila SB210|Rep: Leucine Rich Repeat
family protein - Tetrahymena thermophila SB210
Length = 1526
Score = 36.7 bits (81), Expect = 2.9
Identities = 17/51 (33%), Positives = 30/51 (58%)
Query: 523 EKHLENNLTVAEQSPAVLLTKVLRLLEEGNNMEAKNFLLRALNVHSKNRYL 573
++ +E L + E+S A+ K+L L EE NN++ +N +L+ N +N L
Sbjct: 1188 KQKIEECLKLIEESSAIYENKLLELKEEKNNLDTENIVLKEKNHRQENEIL 1238
>UniRef50_Q98L23 Cluster: Sarcosine dehydrogenase; n=3;
Alphaproteobacteria|Rep: Sarcosine dehydrogenase -
Rhizobium loti (Mesorhizobium loti)
Length = 856
Score = 36.3 bits (80), Expect = 3.8
Identities = 23/54 (42%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 577 YGALNFD-QGTEGKDLAAAAFRIAVRGDYSDGTGIAIGWAALHSFYHYHQNSYA 629
YGA FD +G E + AA AVRG +DG +GW F HY Q S A
Sbjct: 759 YGAPRFDDKGKEVRGSKAAEGASAVRG-IADGEWRVVGWVTSGGFAHYVQKSMA 811
>UniRef50_Q67L83 Cluster: Putative uncharacterized protein; n=1;
Symbiobacterium thermophilum|Rep: Putative
uncharacterized protein - Symbiobacterium thermophilum
Length = 286
Score = 36.3 bits (80), Expect = 3.8
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 812 RAHKMVPSGYSAFVLARIYNILGEKELAERWAAAAVKSEPLLSDGWAFLALLALHER 868
RAH +V + A LAR Y L E A W + A + L GW F+ +L L+ER
Sbjct: 203 RAHDLVDAAEVALFLARAYWRLREHGAASAWISRAAEFAAL--QGWRFVDVLHLNER 257
>UniRef50_Q2SEX0 Cluster: FOG: TPR repeat; n=1; Hahella chejuensis
KCTC 2396|Rep: FOG: TPR repeat - Hahella chejuensis
(strain KCTC 2396)
Length = 378
Score = 36.3 bits (80), Expect = 3.8
Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 820 GYSAFVLARIYNILGEKELAERWAAAAVKSEPLLSDGWAFLALLALHERKIDNAKAMMRT 879
GY A +LAR Y +G+ ER+A A+ +P S+ A LA+ D A +R
Sbjct: 127 GY-ALILARAYYAMGDLPEVERFANLAISLQPNFSEAKAVLAMCLQDNEDFDKA---IRV 182
Query: 880 ANQVGTVSNDINEALESLKAEINL 903
A +V D EAL +KA +L
Sbjct: 183 AEEVLAQEPDNAEAL-GVKAYCSL 205
>UniRef50_Q0EZD5 Cluster: TPR repeat; n=1; Mariprofundus
ferrooxydans PV-1|Rep: TPR repeat - Mariprofundus
ferrooxydans PV-1
Length = 264
Score = 36.3 bits (80), Expect = 3.8
Identities = 21/48 (43%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
Query: 517 GYRKLAEKHLENNLTVAEQSPAVL-LTKVLRLLEEGNNMEAKNFLLRA 563
G +K A K E NL +A P+V+ LT +LR +EGN ++AK +L +A
Sbjct: 71 GQKKEAAKLYEENLAIAWHLPSVINLTAILR--QEGNTVQAKRWLKKA 116
>UniRef50_Q1DGB9 Cluster: Putative uncharacterized protein; n=1;
Myxococcus xanthus DK 1622|Rep: Putative uncharacterized
protein - Myxococcus xanthus (strain DK 1622)
Length = 521
Score = 35.9 bits (79), Expect = 5.0
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Query: 741 THEG--IKRFGPSAILSQINASCLTCSRGWDGQCESALEEADKAGAQPCPAILLRAALGG 798
THE K P +L Q + + + G Q AL A K Q PA+L++A L
Sbjct: 99 THEAPKAKSQAPMEVLVQTDRAARAAATGQRAQAHEALAAALKLAPQHAPALLVKACLAL 158
Query: 799 MQSEPAVSLQRAARAHKMVPSGYSAFVLARI 829
+ + + R P A +LAR+
Sbjct: 159 EEGQDTEASDALRRLEAAAPGAPEAKLLARL 189
>UniRef50_Q23HD4 Cluster: TPR Domain containing protein; n=2;
Tetrahymena thermophila SB210|Rep: TPR Domain containing
protein - Tetrahymena thermophila SB210
Length = 993
Score = 35.9 bits (79), Expect = 5.0
Identities = 17/61 (27%), Positives = 33/61 (54%)
Query: 834 GEKELAERWAAAAVKSEPLLSDGWAFLALLALHERKIDNAKAMMRTANQVGTVSNDINEA 893
G E+A+++ A++ EPL DG+ +L ++ L++ + A+ + A Q+ S N
Sbjct: 548 GNDEIAKKYFQKALEIEPLSEDGFIYLGIIYLNQNMLKEAEFYLTKAYQINPNSFKCNSQ 607
Query: 894 L 894
L
Sbjct: 608 L 608
>UniRef50_UPI0000D5555B Cluster: PREDICTED: similar to CG17531-PA;
n=2; Tribolium castaneum|Rep: PREDICTED: similar to
CG17531-PA - Tribolium castaneum
Length = 215
Score = 35.5 bits (78), Expect = 6.6
Identities = 16/59 (27%), Positives = 32/59 (54%)
Query: 182 AKDGTVYLGAIGLDSLTQNVMNFGNSLSFPEAKKIVWADVSNAAQAANTEFEIPNEDIY 240
AKD ++Y + ++ M+F N ++FPE KI++ + + + E EI +++Y
Sbjct: 79 AKDDSLYPNDLKQRAIVNQRMHFENGVAFPELLKILYPIIHDGKKTITQEDEIAADEVY 137
>UniRef50_Q5UEX3 Cluster: Putative uncharacterized protein; n=1;
uncultured alpha proteobacterium EBAC2C11|Rep: Putative
uncharacterized protein - uncultured alpha
proteobacterium EBAC2C11
Length = 321
Score = 35.5 bits (78), Expect = 6.6
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 9/82 (10%)
Query: 762 LTCSRGWDGQCESALEEADKAG---AQPCPAILLRAALGGMQSEPAVSLQ--RAARAHKM 816
LT +GW G + LE++ K+G AQ C + + R G++ +P + Q AA HK
Sbjct: 45 LTLQKGWAGLASNNLEQSAKSGSGLAQSCLSHMYREGF-GVEKDPVKAFQWCSAAAEHKD 103
Query: 817 VPSGYSAFVLARIY-NILGEKE 837
P + F LA +Y + LG K+
Sbjct: 104 KPE--ATFELAMMYWHGLGVKQ 123
>UniRef50_Q09CD1 Cluster: Tetratricopeptide repeat domain protein;
n=2; Cystobacterineae|Rep: Tetratricopeptide repeat
domain protein - Stigmatella aurantiaca DW4/3-1
Length = 1258
Score = 35.5 bits (78), Expect = 6.6
Identities = 37/128 (28%), Positives = 56/128 (43%), Gaps = 5/128 (3%)
Query: 770 GQCESALEEADKAGAQPCPAILLRAALGGMQSEPAVSLQRAARAHKMV-PSGYSAFVL-A 827
G+ LE A + A++LRA L +PAV+L+ A + P+ + +L A
Sbjct: 433 GRATRELETALAKDPKDVTALMLRAELSLGDEQPAVALEVLQTALEAAGPAAFPVHLLRA 492
Query: 828 RIYNILGEKELAERWAAAAVKSEPLLSDGWAFLALLALHERKIDNAKAMMRTANQVGTVS 887
R LG + AE AAA+ + P L D LA R+ D M R ++ S
Sbjct: 493 RAALALGVEAQAEDSLAAALTAWPKLCDALGLRYTLA---RRRDAVDLMDRLVSESAGCS 549
Query: 888 NDINEALE 895
++ A E
Sbjct: 550 GALSRAAE 557
>UniRef50_A7HI06 Cluster: Serine/threonine protein kinase; n=1;
Anaeromyxobacter sp. Fw109-5|Rep: Serine/threonine
protein kinase - Anaeromyxobacter sp. Fw109-5
Length = 990
Score = 35.5 bits (78), Expect = 6.6
Identities = 31/95 (32%), Positives = 43/95 (45%), Gaps = 1/95 (1%)
Query: 807 LQRAARAHKMVPSGYSAFVLARIYNILGEKELAERWAAAAVKSEPLLSDGWAFLALLALH 866
L RA R + VP G S LA + G E AER A A++ + + A L L
Sbjct: 677 LARARRWVERVPGGASYRSLAHAELLAGRIEDAERDARRALELDGNIFSRTALAEALMLG 736
Query: 867 ERKIDNAKAMMRTANQVGTVSNDINEALESLKAEI 901
ER A+A++R A + G D +A L A +
Sbjct: 737 ER-YGEAEALLRPATEPGAAPTDRMKASAQLAAAL 770
>UniRef50_A4MID7 Cluster: Glycosyl transferase, family 2; n=1;
Geobacter bemidjiensis Bem|Rep: Glycosyl transferase,
family 2 - Geobacter bemidjiensis Bem
Length = 1523
Score = 35.5 bits (78), Expect = 6.6
Identities = 34/131 (25%), Positives = 59/131 (45%), Gaps = 5/131 (3%)
Query: 723 LQAASLLLRQEYNNAMKI-THEGIKRFGPSAILSQINASCLTCSRGWDGQCESALEEADK 781
L+ A L R + N+A+++ EGI RF P++ + + + C G + LE+
Sbjct: 882 LRGAKLARRGKLNDAVELMLQEGI-RFSPASPAPYLALAGILCEAGNWREALEVLEQV-P 939
Query: 782 AGAQPCPAILLRAALGGMQSEPAVSLQRAARAHKMVPSGYSAFVLARIYNI-LGEKELAE 840
AG + A L+R EPA +++ A +A + P L + + GE E E
Sbjct: 940 AGCE-LDAALMRGRAFKESGEPAQAVEAAKQAEGIDPEAPGTLHLNGVLALSQGEAEKGE 998
Query: 841 RWAAAAVKSEP 851
A+ ++P
Sbjct: 999 ELLRRAITADP 1009
>UniRef50_Q9K7X8 Cluster: Penicillin-binding protein 1A; n=1;
Bacillus halodurans|Rep: Penicillin-binding protein 1A -
Bacillus halodurans
Length = 966
Score = 35.1 bits (77), Expect = 8.7
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 187 VYLGA-IGLDSLTQNVMNFGNSLSFPEAKKIVWADVSNAAQAANTEFEIPNEDIYFPENV 245
V LG IG D+ + + + N L + + +WA ++NAA N E PN+ PE +
Sbjct: 651 VTLGVWIGYDT-PKTIQSPWNGLRYGPRTQQIWARIANAAYDENPELMAPNQSFEMPEGI 709
Query: 246 I 246
+
Sbjct: 710 V 710
>UniRef50_Q01Z72 Cluster: Tetratricopeptide TPR_2 repeat protein
precursor; n=1; Solibacter usitatus Ellin6076|Rep:
Tetratricopeptide TPR_2 repeat protein precursor -
Solibacter usitatus (strain Ellin6076)
Length = 786
Score = 35.1 bits (77), Expect = 8.7
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 830 YNILGEKELAERWAAAAVKSEPLLSDGWAFLALLALHERKIDNAKAMMRTA 880
YN LGE + AE A++ +P S + L LL +R+I +A+A +R A
Sbjct: 617 YNRLGENDRAEEALHQALRLDPRNSSAYLNLGLLMAEKRRIPDAEAALRGA 667
>UniRef50_A6LGB8 Cluster: Putative uncharacterized protein; n=1;
Parabacteroides distasonis ATCC 8503|Rep: Putative
uncharacterized protein - Parabacteroides distasonis
(strain ATCC 8503 / DSM 20701 / NCTC11152)
Length = 442
Score = 35.1 bits (77), Expect = 8.7
Identities = 26/97 (26%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
Query: 820 GYSAFVLARIYNILGEKELAERWAAAAVK-SEPLLSDGWAFLALLALHERKIDNAKAMMR 878
GY + + +Y++LG ELA+++ ++ SE + ++ LA + + E NA+ +
Sbjct: 222 GYISNGIGNVYSVLGNIELAKQYLWKSINVSELDNAPDYSALAGVYIEEGDFKNARLCLE 281
Query: 879 TANQVGTVSNDINEAL-----ESLKAEINLERTPDYL 910
AN + T++ + + ++ E KAE N+E YL
Sbjct: 282 QANIIPTLNENTHISIIYNYYELEKAEGNIENALTYL 318
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.320 0.135 0.404
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,016,303,902
Number of Sequences: 1657284
Number of extensions: 42624899
Number of successful extensions: 97262
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 97246
Number of HSP's gapped (non-prelim): 32
length of query: 921
length of database: 575,637,011
effective HSP length: 108
effective length of query: 813
effective length of database: 396,650,339
effective search space: 322476725607
effective search space used: 322476725607
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 77 (35.1 bits)
- SilkBase 1999-2023 -