Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002790-TA|BGIBMGA002790-PA|IPR000555|Mov34/MPN/PAD-1,
IPR003639|Mov34-1
(348 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR541678-1|CAG46479.1| 334|Homo sapiens COPS5 protein. 555 e-158
BC007272-1|AAH07272.1| 334|Homo sapiens COP9 constitutive photo... 555 e-158
BC001859-1|AAH01859.1| 334|Homo sapiens COP9 constitutive photo... 555 e-158
BC001187-1|AAH01187.1| 334|Homo sapiens COP9 constitutive photo... 555 e-158
U65928-1|AAB16847.1| 334|Homo sapiens Jun activation domain bin... 553 e-157
U70734-1|AAD03468.1| 334|Homo sapiens 38 kDa Mov34 homolog prot... 544 e-154
AB209134-1|BAD92371.1| 276|Homo sapiens COP9 signalosome subuni... 448 e-125
AY078082-1|AAL82571.1| 179|Homo sapiens Jun activation domain b... 292 1e-78
U86782-1|AAC51866.1| 310|Homo sapiens 26S proteasome-associated... 138 3e-32
BC066336-1|AAH66336.1| 310|Homo sapiens proteasome (prosome, ma... 138 3e-32
AC009299-2|AAX88940.1| 154|Homo sapiens unknown protein. 125 2e-28
U54559-1|AAD03465.1| 352|Homo sapiens translation initiation fa... 58 5e-08
CR456906-1|CAG33187.1| 352|Homo sapiens EIF3S3 protein. 58 5e-08
BT019594-1|AAV38401.1| 352|Homo sapiens eukaryotic translation ... 58 5e-08
BC000386-1|AAH00386.1| 352|Homo sapiens eukaryotic translation ... 58 5e-08
AK222620-1|BAD96340.1| 352|Homo sapiens eukaryotic translation ... 58 5e-08
AK222520-1|BAD96240.1| 352|Homo sapiens eukaryotic translation ... 58 5e-08
AF092576-1|AAC84044.1| 352|Homo sapiens translation initiation ... 58 5e-08
BC090880-1|AAH90880.1| 349|Homo sapiens Unknown (protein for MG... 52 3e-06
X64643-1|CAA45917.1| 291|Homo sapiens C6.1A protein. 49 2e-05
S72931-1|AAB30469.2| 363|Homo sapiens T-cell receptor alpha cha... 49 2e-05
S68015-1|AAB29005.2| 321|Homo sapiens c6.1A protein. 49 2e-05
BX470111-2|CAI41654.1| 291|Homo sapiens novel protein (C6.1A) p... 49 2e-05
BX470111-1|CAI41655.1| 316|Homo sapiens novel protein (C6.1A) p... 49 2e-05
BX293995-2|CAH70537.1| 316|Homo sapiens novel protein (C6.1A) p... 49 2e-05
BX293995-1|CAH70538.1| 291|Homo sapiens novel protein (C6.1A) p... 49 2e-05
BC006540-1|AAH06540.1| 316|Homo sapiens BRCA1/BRCA2-containing ... 49 2e-05
BC002999-1|AAH02999.1| 316|Homo sapiens BRCA1/BRCA2-containing ... 49 2e-05
AY438030-1|AAR30498.1| 316|Homo sapiens BRCA1/BRCA2-containing ... 49 2e-05
D50063-1|BAA08780.1| 324|Homo sapiens proteasome subunit p40 / ... 46 2e-04
BC012606-1|AAH12606.1| 324|Homo sapiens proteasome (prosome, ma... 46 2e-04
BC000338-1|AAH00338.1| 326|Homo sapiens PSMD7 protein protein. 46 2e-04
AL450024-1|CAH70737.1| 828|Homo sapiens myb-like, SWIRM and MPN... 44 6e-04
AL035411-1|CAI21908.1| 828|Homo sapiens myb-like, SWIRM and MPN... 44 6e-04
AB067502-1|BAB67808.1| 726|Homo sapiens KIAA1915 protein protein. 44 6e-04
U94855-1|AAD03467.1| 357|Homo sapiens translation initiation fa... 39 0.023
CR456959-1|CAG33240.1| 357|Homo sapiens EIF3S5 protein. 39 0.023
BT006894-1|AAP35540.1| 357|Homo sapiens eukaryotic translation ... 39 0.023
BC000490-1|AAH00490.1| 357|Homo sapiens eukaryotic translation ... 39 0.023
AK095574-1|BAC04577.1| 350|Homo sapiens protein ( Homo sapiens ... 39 0.023
U70735-1|AAD03469.1| 297|Homo sapiens 34 kDa Mov34 homolog prot... 38 0.069
BC002520-1|AAH02520.2| 327|Homo sapiens COP9 constitutive photo... 38 0.069
BX537912-1|CAD97896.1| 234|Homo sapiens hypothetical protein pr... 36 0.16
BC010846-1|AAH10846.2| 436|Homo sapiens STAM binding protein-li... 36 0.16
AL157394-5|CAI13863.1| 270|Homo sapiens novel Mov34/MPN/PAD-1 f... 36 0.16
AL157394-4|CAI13862.1| 461|Homo sapiens novel Mov34/MPN/PAD-1 f... 36 0.16
AL157394-3|CAI13861.1| 436|Homo sapiens novel Mov34/MPN/PAD-1 f... 36 0.16
AB037794-1|BAA92611.1| 463|Homo sapiens KIAA1373 protein protein. 36 0.16
AB010120-1|BAC77766.1| 436|Homo sapiens AMSH-LP protein. 36 0.16
U73522-1|AAD05037.1| 424|Homo sapiens AMSH protein. 34 0.85
BC101469-1|AAI01470.1| 424|Homo sapiens STAM binding protein pr... 34 0.85
BC101467-1|AAI01468.1| 424|Homo sapiens STAM binding protein pr... 34 0.85
BC065574-1|AAH65574.1| 424|Homo sapiens STAM binding protein pr... 34 0.85
BC007682-1|AAH07682.1| 424|Homo sapiens STAM binding protein pr... 34 0.85
AC073046-1|AAX88908.1| 424|Homo sapiens unknown protein. 34 0.85
AC007292-1|AAD24592.1| 498|Homo sapiens R31167_1, partial prote... 34 0.85
BC032652-1|AAH32652.1| 471|Homo sapiens MPN domain containing p... 32 2.6
>CR541678-1|CAG46479.1| 334|Homo sapiens COPS5 protein.
Length = 334
Score = 555 bits (1370), Expect = e-158
Identities = 255/331 (77%), Positives = 289/331 (87%), Gaps = 1/331 (0%)
Query: 6 ADAQASIAQKTWVMANNIETVSNVDDIYRYDKKQQQDILAAKPWEKDPHFFKDIKISALA 65
A + + +AQKTW +ANN++ ++D+IY+YDKKQQQ+ILAAKPW KD H+FK KISALA
Sbjct: 2 AASGSGMAQKTWELANNMQEAQSIDEIYKYDKKQQQEILAAKPWTKDHHYFKYCKISALA 61
Query: 66 LLKMVMHARSGGTLEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQAQAYEYMTAYI 125
LLKMVMHARSGG LEVMGL+LGKVD TMI+MDSFALPVEGTETRVNAQA AYEYM AYI
Sbjct: 62 LLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYI 121
Query: 126 EAAKQVGRHENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVIDPVRTISAGKV 185
E AKQVGR ENAIGWYHSHPGYGCWLSGIDVSTQMLNQ FQEPFVA+VIDP RTISAGKV
Sbjct: 122 ENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKV 181
Query: 186 CLGAFRTYPKGYKPANEEPSEYQTIPLNKIEDFGVHCKQYYSLEVSYFKXXXXXXXXXXX 245
LGAFRTYPKGYKP +E PSEYQTIPLNKIEDFGVHCKQYY+LEVSYFK
Sbjct: 182 NLGAFRTYPKGYKPPDEGPSEYQTIPLNKIEDFGVHCKQYYALEVSYFKSSLDRKLLELL 241
Query: 246 WNKYWVNTLSSSSLITNADYTTGQIFDLSDKLEQSEVCLGRGAFVVAGADPHEKRTEDKL 305
WNKYWVNTLSSSSL+TNADYTTGQ+FDLS+KLEQSE LGRG+F++ G + H++++EDKL
Sbjct: 242 WNKYWVNTLSSSSLLTNADYTTGQVFDLSEKLEQSEAQLGRGSFML-GLETHDRKSEDKL 300
Query: 306 GKATKDACKTTIEVIHGLMAQMIKDRLFNSV 336
KAT+D+CKTTIE IHGLM+Q+IKD+LFN +
Sbjct: 301 AKATRDSCKTTIEAIHGLMSQVIKDKLFNQI 331
>BC007272-1|AAH07272.1| 334|Homo sapiens COP9 constitutive
photomorphogenic homolog subunit 5 (Arabidopsis)
protein.
Length = 334
Score = 555 bits (1370), Expect = e-158
Identities = 255/331 (77%), Positives = 289/331 (87%), Gaps = 1/331 (0%)
Query: 6 ADAQASIAQKTWVMANNIETVSNVDDIYRYDKKQQQDILAAKPWEKDPHFFKDIKISALA 65
A + + +AQKTW +ANN++ ++D+IY+YDKKQQQ+ILAAKPW KD H+FK KISALA
Sbjct: 2 AASGSGMAQKTWELANNMQEAQSIDEIYKYDKKQQQEILAAKPWTKDHHYFKYCKISALA 61
Query: 66 LLKMVMHARSGGTLEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQAQAYEYMTAYI 125
LLKMVMHARSGG LEVMGL+LGKVD TMI+MDSFALPVEGTETRVNAQA AYEYM AYI
Sbjct: 62 LLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYI 121
Query: 126 EAAKQVGRHENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVIDPVRTISAGKV 185
E AKQVGR ENAIGWYHSHPGYGCWLSGIDVSTQMLNQ FQEPFVA+VIDP RTISAGKV
Sbjct: 122 ENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKV 181
Query: 186 CLGAFRTYPKGYKPANEEPSEYQTIPLNKIEDFGVHCKQYYSLEVSYFKXXXXXXXXXXX 245
LGAFRTYPKGYKP +E PSEYQTIPLNKIEDFGVHCKQYY+LEVSYFK
Sbjct: 182 NLGAFRTYPKGYKPPDEGPSEYQTIPLNKIEDFGVHCKQYYALEVSYFKSSLDRKLLELL 241
Query: 246 WNKYWVNTLSSSSLITNADYTTGQIFDLSDKLEQSEVCLGRGAFVVAGADPHEKRTEDKL 305
WNKYWVNTLSSSSL+TNADYTTGQ+FDLS+KLEQSE LGRG+F++ G + H++++EDKL
Sbjct: 242 WNKYWVNTLSSSSLLTNADYTTGQVFDLSEKLEQSEAQLGRGSFML-GLETHDRKSEDKL 300
Query: 306 GKATKDACKTTIEVIHGLMAQMIKDRLFNSV 336
KAT+D+CKTTIE IHGLM+Q+IKD+LFN +
Sbjct: 301 AKATRDSCKTTIEAIHGLMSQVIKDKLFNQI 331
>BC001859-1|AAH01859.1| 334|Homo sapiens COP9 constitutive
photomorphogenic homolog subunit 5 (Arabidopsis)
protein.
Length = 334
Score = 555 bits (1370), Expect = e-158
Identities = 255/331 (77%), Positives = 289/331 (87%), Gaps = 1/331 (0%)
Query: 6 ADAQASIAQKTWVMANNIETVSNVDDIYRYDKKQQQDILAAKPWEKDPHFFKDIKISALA 65
A + + +AQKTW +ANN++ ++D+IY+YDKKQQQ+ILAAKPW KD H+FK KISALA
Sbjct: 2 AASGSGMAQKTWELANNMQEAQSIDEIYKYDKKQQQEILAAKPWTKDHHYFKYCKISALA 61
Query: 66 LLKMVMHARSGGTLEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQAQAYEYMTAYI 125
LLKMVMHARSGG LEVMGL+LGKVD TMI+MDSFALPVEGTETRVNAQA AYEYM AYI
Sbjct: 62 LLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYI 121
Query: 126 EAAKQVGRHENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVIDPVRTISAGKV 185
E AKQVGR ENAIGWYHSHPGYGCWLSGIDVSTQMLNQ FQEPFVA+VIDP RTISAGKV
Sbjct: 122 ENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKV 181
Query: 186 CLGAFRTYPKGYKPANEEPSEYQTIPLNKIEDFGVHCKQYYSLEVSYFKXXXXXXXXXXX 245
LGAFRTYPKGYKP +E PSEYQTIPLNKIEDFGVHCKQYY+LEVSYFK
Sbjct: 182 NLGAFRTYPKGYKPPDEGPSEYQTIPLNKIEDFGVHCKQYYALEVSYFKSSLDRKLLELL 241
Query: 246 WNKYWVNTLSSSSLITNADYTTGQIFDLSDKLEQSEVCLGRGAFVVAGADPHEKRTEDKL 305
WNKYWVNTLSSSSL+TNADYTTGQ+FDLS+KLEQSE LGRG+F++ G + H++++EDKL
Sbjct: 242 WNKYWVNTLSSSSLLTNADYTTGQVFDLSEKLEQSEAQLGRGSFML-GLETHDRKSEDKL 300
Query: 306 GKATKDACKTTIEVIHGLMAQMIKDRLFNSV 336
KAT+D+CKTTIE IHGLM+Q+IKD+LFN +
Sbjct: 301 AKATRDSCKTTIEAIHGLMSQVIKDKLFNQI 331
>BC001187-1|AAH01187.1| 334|Homo sapiens COP9 constitutive
photomorphogenic homolog subunit 5 (Arabidopsis)
protein.
Length = 334
Score = 555 bits (1370), Expect = e-158
Identities = 255/331 (77%), Positives = 289/331 (87%), Gaps = 1/331 (0%)
Query: 6 ADAQASIAQKTWVMANNIETVSNVDDIYRYDKKQQQDILAAKPWEKDPHFFKDIKISALA 65
A + + +AQKTW +ANN++ ++D+IY+YDKKQQQ+ILAAKPW KD H+FK KISALA
Sbjct: 2 AASGSGMAQKTWELANNMQEAQSIDEIYKYDKKQQQEILAAKPWTKDHHYFKYCKISALA 61
Query: 66 LLKMVMHARSGGTLEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQAQAYEYMTAYI 125
LLKMVMHARSGG LEVMGL+LGKVD TMI+MDSFALPVEGTETRVNAQA AYEYM AYI
Sbjct: 62 LLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYI 121
Query: 126 EAAKQVGRHENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVIDPVRTISAGKV 185
E AKQVGR ENAIGWYHSHPGYGCWLSGIDVSTQMLNQ FQEPFVA+VIDP RTISAGKV
Sbjct: 122 ENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKV 181
Query: 186 CLGAFRTYPKGYKPANEEPSEYQTIPLNKIEDFGVHCKQYYSLEVSYFKXXXXXXXXXXX 245
LGAFRTYPKGYKP +E PSEYQTIPLNKIEDFGVHCKQYY+LEVSYFK
Sbjct: 182 NLGAFRTYPKGYKPPDEGPSEYQTIPLNKIEDFGVHCKQYYALEVSYFKSSLDRKLLELL 241
Query: 246 WNKYWVNTLSSSSLITNADYTTGQIFDLSDKLEQSEVCLGRGAFVVAGADPHEKRTEDKL 305
WNKYWVNTLSSSSL+TNADYTTGQ+FDLS+KLEQSE LGRG+F++ G + H++++EDKL
Sbjct: 242 WNKYWVNTLSSSSLLTNADYTTGQVFDLSEKLEQSEAQLGRGSFML-GLETHDRKSEDKL 300
Query: 306 GKATKDACKTTIEVIHGLMAQMIKDRLFNSV 336
KAT+D+CKTTIE IHGLM+Q+IKD+LFN +
Sbjct: 301 AKATRDSCKTTIEAIHGLMSQVIKDKLFNQI 331
>U65928-1|AAB16847.1| 334|Homo sapiens Jun activation domain
binding protein protein.
Length = 334
Score = 553 bits (1365), Expect = e-157
Identities = 254/331 (76%), Positives = 288/331 (87%), Gaps = 1/331 (0%)
Query: 6 ADAQASIAQKTWVMANNIETVSNVDDIYRYDKKQQQDILAAKPWEKDPHFFKDIKISALA 65
A + + +AQKTW +ANN++ ++D+IY+YDKKQQQ+ILAAKPW KD H+FK KISALA
Sbjct: 2 AASGSGMAQKTWELANNMQEAQSIDEIYKYDKKQQQEILAAKPWTKDHHYFKYCKISALA 61
Query: 66 LLKMVMHARSGGTLEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQAQAYEYMTAYI 125
LLKMVMHARSGG LEVMGL+LGKVD TMI+MDSFALPVEGTETRVNAQA AYEYM AYI
Sbjct: 62 LLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYI 121
Query: 126 EAAKQVGRHENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVIDPVRTISAGKV 185
E AKQVG ENAIGWYHSHPGYGCWLSGIDVSTQMLNQ FQEPFVA+VIDP RTISAGKV
Sbjct: 122 ENAKQVGHLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKV 181
Query: 186 CLGAFRTYPKGYKPANEEPSEYQTIPLNKIEDFGVHCKQYYSLEVSYFKXXXXXXXXXXX 245
LGAFRTYPKGYKP +E PSEYQTIPLNKIEDFGVHCKQYY+LEVSYFK
Sbjct: 182 NLGAFRTYPKGYKPPDEGPSEYQTIPLNKIEDFGVHCKQYYALEVSYFKSSLDRKLLELL 241
Query: 246 WNKYWVNTLSSSSLITNADYTTGQIFDLSDKLEQSEVCLGRGAFVVAGADPHEKRTEDKL 305
WNKYWVNTLSSSSL+TNADYTTGQ+FDLS+KLEQSE LGRG+F++ G + H++++EDKL
Sbjct: 242 WNKYWVNTLSSSSLLTNADYTTGQVFDLSEKLEQSEAQLGRGSFML-GLETHDRKSEDKL 300
Query: 306 GKATKDACKTTIEVIHGLMAQMIKDRLFNSV 336
KAT+D+CKTTIE IHGLM+Q+IKD+LFN +
Sbjct: 301 AKATRDSCKTTIEAIHGLMSQVIKDKLFNQI 331
>U70734-1|AAD03468.1| 334|Homo sapiens 38 kDa Mov34 homolog
protein.
Length = 334
Score = 544 bits (1342), Expect = e-154
Identities = 252/331 (76%), Positives = 286/331 (86%), Gaps = 1/331 (0%)
Query: 6 ADAQASIAQKTWVMANNIETVSNVDDIYRYDKKQQQDILAAKPWEKDPHFFKDIKISALA 65
A + + +AQKTW +ANN++ ++D+IY+YDKKQQQ+ILAA KD H+FK KISALA
Sbjct: 2 AASGSGMAQKTWELANNMQEAQSIDEIYKYDKKQQQEILAANLGTKDHHYFKYCKISALA 61
Query: 66 LLKMVMHARSGGTLEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQAQAYEYMTAYI 125
LLKMVMHARSGG LEVMGL+LGKVD TMI+MDSFALPVEGTETRVNAQA AYEYM AYI
Sbjct: 62 LLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYI 121
Query: 126 EAAKQVGRHENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVIDPVRTISAGKV 185
E AKQVGR ENAIGWYHSHPGYGCWLSGIDVSTQMLNQ FQEPFVA+VIDP RTISAGKV
Sbjct: 122 ENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKV 181
Query: 186 CLGAFRTYPKGYKPANEEPSEYQTIPLNKIEDFGVHCKQYYSLEVSYFKXXXXXXXXXXX 245
LGAFRTYPKGYKP +E PSEYQTIPLNKIEDFGVHCKQYY+LEVSYFK
Sbjct: 182 NLGAFRTYPKGYKPPDEGPSEYQTIPLNKIEDFGVHCKQYYALEVSYFKSSLDRKLLELL 241
Query: 246 WNKYWVNTLSSSSLITNADYTTGQIFDLSDKLEQSEVCLGRGAFVVAGADPHEKRTEDKL 305
WNKYWVNTLSSSSL+TNADYTTGQ+FDLS+KLEQSE LGRG+F++ G + H++++EDKL
Sbjct: 242 WNKYWVNTLSSSSLLTNADYTTGQVFDLSEKLEQSEAQLGRGSFML-GLETHDRKSEDKL 300
Query: 306 GKATKDACKTTIEVIHGLMAQMIKDRLFNSV 336
KAT+D+CKTTIE IHGLM+Q+IKD+LFN +
Sbjct: 301 AKATRDSCKTTIEAIHGLMSQVIKDKLFNQI 331
>AB209134-1|BAD92371.1| 276|Homo sapiens COP9 signalosome subunit 5
variant protein.
Length = 276
Score = 448 bits (1103), Expect = e-125
Identities = 209/258 (81%), Positives = 227/258 (87%), Gaps = 1/258 (0%)
Query: 54 HFFKDIKISALALLKMVMHARSGGTLEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNA 113
H+FK KISALALLKMVMHARSGG LEVMGL+LGKVD TMI+MDSFALPVEGTETRVNA
Sbjct: 19 HYFKYCKISALALLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNA 78
Query: 114 QAQAYEYMTAYIEAAKQVGRHENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIV 173
QA AYEYM AYIE AKQVGR ENAIGWYHSHPGYGCWLSGIDVSTQMLNQ FQEPFVA+V
Sbjct: 79 QAAAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVV 138
Query: 174 IDPVRTISAGKVCLGAFRTYPKGYKPANEEPSEYQTIPLNKIEDFGVHCKQYYSLEVSYF 233
IDP RTISAGKV LGAFRTYPKGYKP +E PSEYQTIPLNKIEDFGVHCKQYY+LEVSYF
Sbjct: 139 IDPTRTISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNKIEDFGVHCKQYYALEVSYF 198
Query: 234 KXXXXXXXXXXXWNKYWVNTLSSSSLITNADYTTGQIFDLSDKLEQSEVCLGRGAFVVAG 293
K WNKYWVNTLSSSSL+TNADYTTGQ+FDLS+KLEQSE LGRG+F++ G
Sbjct: 199 KSSLDRKLLELLWNKYWVNTLSSSSLLTNADYTTGQVFDLSEKLEQSEAQLGRGSFML-G 257
Query: 294 ADPHEKRTEDKLGKATKD 311
+ H++++EDKL KAT+D
Sbjct: 258 LETHDRKSEDKLAKATRD 275
>AY078082-1|AAL82571.1| 179|Homo sapiens Jun activation domain
binding protein protein.
Length = 179
Score = 292 bits (716), Expect = 1e-78
Identities = 133/177 (75%), Positives = 153/177 (86%), Gaps = 1/177 (0%)
Query: 160 MLNQNFQEPFVAIVIDPVRTISAGKVCLGAFRTYPKGYKPANEEPSEYQTIPLNKIEDFG 219
MLNQ FQEPFVA+VIDP RTISAGKV LGAFRTYPKGYKP +E PSEYQTIPLNKIEDFG
Sbjct: 1 MLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNKIEDFG 60
Query: 220 VHCKQYYSLEVSYFKXXXXXXXXXXXWNKYWVNTLSSSSLITNADYTTGQIFDLSDKLEQ 279
VHCKQYY+LEVSYFK WNKYWVNTLSSSSL+TNADYTTGQ+FDLS+KLEQ
Sbjct: 61 VHCKQYYALEVSYFKSSLDRKLLELLWNKYWVNTLSSSSLLTNADYTTGQVFDLSEKLEQ 120
Query: 280 SEVCLGRGAFVVAGADPHEKRTEDKLGKATKDACKTTIEVIHGLMAQMIKDRLFNSV 336
SE LGRG+F++ G + H++++EDKL KAT+D+CKTTIE IHGLM+Q+IKD+LFN +
Sbjct: 121 SEAQLGRGSFML-GLETHDRKSEDKLAKATRDSCKTTIEAIHGLMSQVIKDKLFNQI 176
>U86782-1|AAC51866.1| 310|Homo sapiens 26S proteasome-associated
pad1 homolog protein.
Length = 310
Score = 138 bits (334), Expect = 3e-32
Identities = 76/206 (36%), Positives = 113/206 (54%), Gaps = 11/206 (5%)
Query: 57 KDIKISALALLKMVMHARSGGTLEVMGLLLGK-VDANTMIVMDSFALPVEGTETRVNAQA 115
+ + IS+LALLKM+ H R+G +EVMGL+LG+ VD T+ V+D FA+P GT V A
Sbjct: 29 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQSGTGVSVEAVD 88
Query: 116 QAYEYMTAYIEAAKQVGRHENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVID 175
++ ++ KQ GR E +GWYHSHPG+GCWLSG+D++TQ + E VA+V+D
Sbjct: 89 PVFQ--AKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVD 146
Query: 176 PVRTISAGKVCLGAFRTYPKGYKPANEEPSEYQTIPLNKIEDFGVHC------KQYYSLE 229
P++++ GKV + AFR EP + T L + + + YYS+
Sbjct: 147 PIQSVK-GKVVIDAFRLINANMMVLGHEPRQ-TTSNLGHLNKPSIQALIHGLNRHYYSIT 204
Query: 230 VSYFKXXXXXXXXXXXWNKYWVNTLS 255
++Y K K W+ L+
Sbjct: 205 INYRKNELEQKMLLNLHKKSWMEGLT 230
>BC066336-1|AAH66336.1| 310|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 14 protein.
Length = 310
Score = 138 bits (334), Expect = 3e-32
Identities = 76/206 (36%), Positives = 113/206 (54%), Gaps = 11/206 (5%)
Query: 57 KDIKISALALLKMVMHARSGGTLEVMGLLLGK-VDANTMIVMDSFALPVEGTETRVNAQA 115
+ + IS+LALLKM+ H R+G +EVMGL+LG+ VD T+ V+D FA+P GT V A
Sbjct: 29 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQSGTGVSVEAVD 88
Query: 116 QAYEYMTAYIEAAKQVGRHENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVID 175
++ ++ KQ GR E +GWYHSHPG+GCWLSG+D++TQ + E VA+V+D
Sbjct: 89 PVFQ--AKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVD 146
Query: 176 PVRTISAGKVCLGAFRTYPKGYKPANEEPSEYQTIPLNKIEDFGVHC------KQYYSLE 229
P++++ GKV + AFR EP + T L + + + YYS+
Sbjct: 147 PIQSVK-GKVVIDAFRLINANMMVLGHEPRQ-TTSNLGHLNKPSIQALIHGLNRHYYSIT 204
Query: 230 VSYFKXXXXXXXXXXXWNKYWVNTLS 255
++Y K K W+ L+
Sbjct: 205 INYRKNELEQKMLLNLHKKSWMEGLT 230
>AC009299-2|AAX88940.1| 154|Homo sapiens unknown protein.
Length = 154
Score = 125 bits (302), Expect = 2e-28
Identities = 58/125 (46%), Positives = 85/125 (68%), Gaps = 3/125 (2%)
Query: 57 KDIKISALALLKMVMHARSGGTLEVMGLLLGK-VDANTMIVMDSFALPVEGTETRVNAQA 115
+ + IS+LALLKM+ H R+G +EVMGL+LG+ VD T+ V+D FA+P GT V A
Sbjct: 29 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQSGTGVSVEAVD 88
Query: 116 QAYEYMTAYIEAAKQVGRHENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVID 175
++ ++ KQ GR E +GWYHSHPG+GCWLSG+D++TQ + E VA+V+D
Sbjct: 89 PVFQ--AKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVD 146
Query: 176 PVRTI 180
P++++
Sbjct: 147 PIQSV 151
>U54559-1|AAD03465.1| 352|Homo sapiens translation initiation
factor eIF3 p40 subunit protein.
Length = 352
Score = 58.0 bits (134), Expect = 5e-08
Identities = 39/141 (27%), Positives = 69/141 (48%), Gaps = 7/141 (4%)
Query: 57 KDIKISALALLKMVMHARSGG--TLEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQ 114
K ++I L +LK++ H + G T V G+LLG V + + + + F P T +A
Sbjct: 37 KQVQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFP---QHTEDDAD 93
Query: 115 AQAYEYMTAYIEAAKQVGRHENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVI 174
+Y + + + V +GWY S YG +++ + +Q Q+ E V ++
Sbjct: 94 FDEVQYQMEMMRSLRHVNIDHLHVGWYQS-TYYGSFVTRALLDSQFSYQHAIEESVVLIY 152
Query: 175 DPVRTISAGKVCLGAFRTYPK 195
DP++T + G + L A+R PK
Sbjct: 153 DPIKT-AQGSLSLKAYRLTPK 172
>CR456906-1|CAG33187.1| 352|Homo sapiens EIF3S3 protein.
Length = 352
Score = 58.0 bits (134), Expect = 5e-08
Identities = 39/141 (27%), Positives = 69/141 (48%), Gaps = 7/141 (4%)
Query: 57 KDIKISALALLKMVMHARSGG--TLEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQ 114
K ++I L +LK++ H + G T V G+LLG V + + + + F P T +A
Sbjct: 37 KQVQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFP---QHTEDDAD 93
Query: 115 AQAYEYMTAYIEAAKQVGRHENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVI 174
+Y + + + V +GWY S YG +++ + +Q Q+ E V ++
Sbjct: 94 FDEVQYQMEMMRSLRHVNIDHLHVGWYQS-TYYGSFVTRALLDSQFSYQHAIEESVVLIY 152
Query: 175 DPVRTISAGKVCLGAFRTYPK 195
DP++T + G + L A+R PK
Sbjct: 153 DPIKT-AQGSLSLKAYRLTPK 172
>BT019594-1|AAV38401.1| 352|Homo sapiens eukaryotic translation
initiation factor 3, subunit 3 gamma, 40kDa protein.
Length = 352
Score = 58.0 bits (134), Expect = 5e-08
Identities = 39/141 (27%), Positives = 69/141 (48%), Gaps = 7/141 (4%)
Query: 57 KDIKISALALLKMVMHARSGG--TLEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQ 114
K ++I L +LK++ H + G T V G+LLG V + + + + F P T +A
Sbjct: 37 KQVQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFP---QHTEDDAD 93
Query: 115 AQAYEYMTAYIEAAKQVGRHENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVI 174
+Y + + + V +GWY S YG +++ + +Q Q+ E V ++
Sbjct: 94 FDEVQYQMEMMRSLRHVNIDHLHVGWYQS-TYYGSFVTRALLDSQFSYQHAIEESVVLIY 152
Query: 175 DPVRTISAGKVCLGAFRTYPK 195
DP++T + G + L A+R PK
Sbjct: 153 DPIKT-AQGSLSLKAYRLTPK 172
>BC000386-1|AAH00386.1| 352|Homo sapiens eukaryotic translation
initiation factor 3, subunit 3 gamma, 40kDa protein.
Length = 352
Score = 58.0 bits (134), Expect = 5e-08
Identities = 39/141 (27%), Positives = 69/141 (48%), Gaps = 7/141 (4%)
Query: 57 KDIKISALALLKMVMHARSGG--TLEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQ 114
K ++I L +LK++ H + G T V G+LLG V + + + + F P T +A
Sbjct: 37 KQVQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFP---QHTEDDAD 93
Query: 115 AQAYEYMTAYIEAAKQVGRHENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVI 174
+Y + + + V +GWY S YG +++ + +Q Q+ E V ++
Sbjct: 94 FDEVQYQMEMMRSLRHVNIDHLHVGWYQS-TYYGSFVTRALLDSQFSYQHAIEESVVLIY 152
Query: 175 DPVRTISAGKVCLGAFRTYPK 195
DP++T + G + L A+R PK
Sbjct: 153 DPIKT-AQGSLSLKAYRLTPK 172
>AK222620-1|BAD96340.1| 352|Homo sapiens eukaryotic translation
initiation factor 3, subunit 3 gamma, 40kDa variant
protein.
Length = 352
Score = 58.0 bits (134), Expect = 5e-08
Identities = 39/141 (27%), Positives = 69/141 (48%), Gaps = 7/141 (4%)
Query: 57 KDIKISALALLKMVMHARSGG--TLEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQ 114
K ++I L +LK++ H + G T V G+LLG V + + + + F P T +A
Sbjct: 37 KQVQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFP---QHTEDDAD 93
Query: 115 AQAYEYMTAYIEAAKQVGRHENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVI 174
+Y + + + V +GWY S YG +++ + +Q Q+ E V ++
Sbjct: 94 FDEVQYQMEMMRSLRHVNIDHLHVGWYQS-TYYGSFVTRALLDSQFSYQHAIEESVVLIY 152
Query: 175 DPVRTISAGKVCLGAFRTYPK 195
DP++T + G + L A+R PK
Sbjct: 153 DPIKT-AQGSLSLKAYRLTPK 172
>AK222520-1|BAD96240.1| 352|Homo sapiens eukaryotic translation
initiation factor 3, subunit 3 gamma, 40kDa variant
protein.
Length = 352
Score = 58.0 bits (134), Expect = 5e-08
Identities = 39/141 (27%), Positives = 69/141 (48%), Gaps = 7/141 (4%)
Query: 57 KDIKISALALLKMVMHARSGG--TLEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQ 114
K ++I L +LK++ H + G T V G+LLG V + + + + F P T +A
Sbjct: 37 KQVQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFP---QHTEDDAD 93
Query: 115 AQAYEYMTAYIEAAKQVGRHENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVI 174
+Y + + + V +GWY S YG +++ + +Q Q+ E V ++
Sbjct: 94 FDEVQYQMEMMRSLRHVNIDHLHVGWYQS-TYYGSFVTRALLDSQFSYQHAIEESVVLIY 152
Query: 175 DPVRTISAGKVCLGAFRTYPK 195
DP++T + G + L A+R PK
Sbjct: 153 DPIKT-AQGSLSLKAYRLTPK 172
>AF092576-1|AAC84044.1| 352|Homo sapiens translation initiation
factor eIF3 p40 subunit protein.
Length = 352
Score = 58.0 bits (134), Expect = 5e-08
Identities = 39/141 (27%), Positives = 69/141 (48%), Gaps = 7/141 (4%)
Query: 57 KDIKISALALLKMVMHARSGG--TLEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQ 114
K ++I L +LK++ H + G T V G+LLG V + + + + F P T +A
Sbjct: 37 KQVQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVKDRLEITNCFPFP---QHTEDDAD 93
Query: 115 AQAYEYMTAYIEAAKQVGRHENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVI 174
+Y + + + V +GWY S YG +++ + +Q Q+ E V ++
Sbjct: 94 FDEVQYQMEMMRSLRHVNIDHLHVGWYQS-TYYGSFVTRALLDSQFSYQHAIEESVVLIY 152
Query: 175 DPVRTISAGKVCLGAFRTYPK 195
DP++T + G + L A+R PK
Sbjct: 153 DPIKT-AQGSLSLKAYRLTPK 172
>BC090880-1|AAH90880.1| 349|Homo sapiens Unknown (protein for
MGC:102958) protein.
Length = 349
Score = 52.0 bits (119), Expect = 3e-06
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 6/139 (4%)
Query: 57 KDIKISALALLKMVMHARSGGTLEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQAQ 116
K ++I L + K GT V G+LLG V + + + + F P T +A
Sbjct: 37 KQVQIDGLVVFKHYQE-EGQGTEVVQGVLLGLVVEDRLEITNCFPFP---QHTEDDADFD 92
Query: 117 AYEYMTAYIEAAKQVGRHENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVIDP 176
+Y + + + V +GWY S YG +++ + +Q Q+ E V ++ DP
Sbjct: 93 EVQYQMEMMRSLRHVNIDHLHVGWYQS-TYYGSFVTRALLDSQFSYQHAIEESVVLIYDP 151
Query: 177 VRTISAGKVCLGAFRTYPK 195
++T + G + L A+R PK
Sbjct: 152 IKT-AQGSLSLKAYRLTPK 169
>X64643-1|CAA45917.1| 291|Homo sapiens C6.1A protein.
Length = 291
Score = 49.2 bits (112), Expect = 2e-05
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Query: 88 KVDANTMIVMDSFALPVEGTETRVNAQAQAYEYMTAYIEA---AKQVGRHENAIGWYHSH 144
KVDA ++ + S + + + + + A EA A+ GR +GWYHSH
Sbjct: 65 KVDAVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSH 124
Query: 145 PGYGCWLSGIDVSTQMLNQNFQEPFVAIV 173
P W S +DV TQ + Q + FV ++
Sbjct: 125 PHITVWPSHVDVRTQAMYQMMDQGFVGLI 153
>S72931-1|AAB30469.2| 363|Homo sapiens T-cell receptor alpha
chain-c6.1A fusion protein protein.
Length = 363
Score = 49.2 bits (112), Expect = 2e-05
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Query: 88 KVDANTMIVMDSFALPVEGTETRVNAQAQAYEYMTAYIEA---AKQVGRHENAIGWYHSH 144
KVDA ++ + S + + + + + A EA A+ GR +GWYHSH
Sbjct: 21 KVDAVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSH 80
Query: 145 PGYGCWLSGIDVSTQMLNQNFQEPFVAIV 173
P W S +DV TQ + Q + FV ++
Sbjct: 81 PHITVWPSHVDVRTQAMYQMMDQGFVGLI 109
>S68015-1|AAB29005.2| 321|Homo sapiens c6.1A protein.
Length = 321
Score = 49.2 bits (112), Expect = 2e-05
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Query: 88 KVDANTMIVMDSFALPVEGTETRVNAQAQAYEYMTAYIEA---AKQVGRHENAIGWYHSH 144
KVDA ++ + S + + + + + A EA A+ GR +GWYHSH
Sbjct: 70 KVDAVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSH 129
Query: 145 PGYGCWLSGIDVSTQMLNQNFQEPFVAIV 173
P W S +DV TQ + Q + FV ++
Sbjct: 130 PHITVWPSHVDVRTQAMYQMMDQGFVGLI 158
>BX470111-2|CAI41654.1| 291|Homo sapiens novel protein (C6.1A)
protein.
Length = 291
Score = 49.2 bits (112), Expect = 2e-05
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Query: 88 KVDANTMIVMDSFALPVEGTETRVNAQAQAYEYMTAYIEA---AKQVGRHENAIGWYHSH 144
KVDA ++ + S + + + + + A EA A+ GR +GWYHSH
Sbjct: 65 KVDAVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSH 124
Query: 145 PGYGCWLSGIDVSTQMLNQNFQEPFVAIV 173
P W S +DV TQ + Q + FV ++
Sbjct: 125 PHITVWPSHVDVRTQAMYQMMDQGFVGLI 153
>BX470111-1|CAI41655.1| 316|Homo sapiens novel protein (C6.1A)
protein.
Length = 316
Score = 49.2 bits (112), Expect = 2e-05
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Query: 88 KVDANTMIVMDSFALPVEGTETRVNAQAQAYEYMTAYIEA---AKQVGRHENAIGWYHSH 144
KVDA ++ + S + + + + + A EA A+ GR +GWYHSH
Sbjct: 65 KVDAVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSH 124
Query: 145 PGYGCWLSGIDVSTQMLNQNFQEPFVAIV 173
P W S +DV TQ + Q + FV ++
Sbjct: 125 PHITVWPSHVDVRTQAMYQMMDQGFVGLI 153
>BX293995-2|CAH70537.1| 316|Homo sapiens novel protein (C6.1A)
protein.
Length = 316
Score = 49.2 bits (112), Expect = 2e-05
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Query: 88 KVDANTMIVMDSFALPVEGTETRVNAQAQAYEYMTAYIEA---AKQVGRHENAIGWYHSH 144
KVDA ++ + S + + + + + A EA A+ GR +GWYHSH
Sbjct: 65 KVDAVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSH 124
Query: 145 PGYGCWLSGIDVSTQMLNQNFQEPFVAIV 173
P W S +DV TQ + Q + FV ++
Sbjct: 125 PHITVWPSHVDVRTQAMYQMMDQGFVGLI 153
>BX293995-1|CAH70538.1| 291|Homo sapiens novel protein (C6.1A)
protein.
Length = 291
Score = 49.2 bits (112), Expect = 2e-05
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Query: 88 KVDANTMIVMDSFALPVEGTETRVNAQAQAYEYMTAYIEA---AKQVGRHENAIGWYHSH 144
KVDA ++ + S + + + + + A EA A+ GR +GWYHSH
Sbjct: 65 KVDAVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSH 124
Query: 145 PGYGCWLSGIDVSTQMLNQNFQEPFVAIV 173
P W S +DV TQ + Q + FV ++
Sbjct: 125 PHITVWPSHVDVRTQAMYQMMDQGFVGLI 153
>BC006540-1|AAH06540.1| 316|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 316
Score = 49.2 bits (112), Expect = 2e-05
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Query: 88 KVDANTMIVMDSFALPVEGTETRVNAQAQAYEYMTAYIEA---AKQVGRHENAIGWYHSH 144
KVDA ++ + S + + + + + A EA A+ GR +GWYHSH
Sbjct: 65 KVDAVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSH 124
Query: 145 PGYGCWLSGIDVSTQMLNQNFQEPFVAIV 173
P W S +DV TQ + Q + FV ++
Sbjct: 125 PHITVWPSHVDVRTQAMYQMMDQGFVGLI 153
>BC002999-1|AAH02999.1| 316|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 316
Score = 49.2 bits (112), Expect = 2e-05
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Query: 88 KVDANTMIVMDSFALPVEGTETRVNAQAQAYEYMTAYIEA---AKQVGRHENAIGWYHSH 144
KVDA ++ + S + + + + + A EA A+ GR +GWYHSH
Sbjct: 65 KVDAVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSH 124
Query: 145 PGYGCWLSGIDVSTQMLNQNFQEPFVAIV 173
P W S +DV TQ + Q + FV ++
Sbjct: 125 PHITVWPSHVDVRTQAMYQMMDQGFVGLI 153
>AY438030-1|AAR30498.1| 316|Homo sapiens BRCA1/BRCA2-containing
complex subunit 36 protein.
Length = 316
Score = 49.2 bits (112), Expect = 2e-05
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Query: 88 KVDANTMIVMDSFALPVEGTETRVNAQAQAYEYMTAYIEA---AKQVGRHENAIGWYHSH 144
KVDA ++ + S + + + + + A EA A+ GR +GWYHSH
Sbjct: 65 KVDAVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSH 124
Query: 145 PGYGCWLSGIDVSTQMLNQNFQEPFVAIV 173
P W S +DV TQ + Q + FV ++
Sbjct: 125 PHITVWPSHVDVRTQAMYQMMDQGFVGLI 153
>D50063-1|BAA08780.1| 324|Homo sapiens proteasome subunit p40 /
Mov34 protein protein.
Length = 324
Score = 46.0 bits (104), Expect = 2e-04
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 8/121 (6%)
Query: 59 IKISALALLKMVMH----ARSGGTLEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQ 114
+ + L LL +V H + G V+G+LLG + V +SFA+P + + +
Sbjct: 9 VVVHPLVLLSVVDHFNRIVKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSVW 68
Query: 115 AQAYEYMTAYIEAAKQVGRHENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVI 174
++Y+ K+V E +GWYH+ P L D++ L + + V ++I
Sbjct: 69 FLDHDYLENMYGMFKKVNARERIVGWYHTGPK----LHKNDIAINELMKRYCPNSVLVII 124
Query: 175 D 175
D
Sbjct: 125 D 125
>BC012606-1|AAH12606.1| 324|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 7 (Mov34 homolog)
protein.
Length = 324
Score = 46.0 bits (104), Expect = 2e-04
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 8/121 (6%)
Query: 59 IKISALALLKMVMH----ARSGGTLEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQ 114
+ + L LL +V H + G V+G+LLG + V +SFA+P + + +
Sbjct: 9 VVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSVW 68
Query: 115 AQAYEYMTAYIEAAKQVGRHENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVI 174
++Y+ K+V E +GWYH+ P L D++ L + + V ++I
Sbjct: 69 FLDHDYLENMYGMFKKVNARERIVGWYHTGPK----LHKNDIAINELMKRYCPNSVLVII 124
Query: 175 D 175
D
Sbjct: 125 D 125
>BC000338-1|AAH00338.1| 326|Homo sapiens PSMD7 protein protein.
Length = 326
Score = 46.0 bits (104), Expect = 2e-04
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 8/121 (6%)
Query: 59 IKISALALLKMVMH----ARSGGTLEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQ 114
+ + L LL +V H + G V+G+LLG + V +SFA+P + + +
Sbjct: 9 VVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSVW 68
Query: 115 AQAYEYMTAYIEAAKQVGRHENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVI 174
++Y+ K+V E +GWYH+ P L D++ L + + V ++I
Sbjct: 69 FLDHDYLENMYGMFKKVNARERIVGWYHTGPK----LHKNDIAINELMKRYCPNSVLVII 124
Query: 175 D 175
D
Sbjct: 125 D 125
>AL450024-1|CAH70737.1| 828|Homo sapiens myb-like, SWIRM and MPN
domains 1 protein.
Length = 828
Score = 44.4 bits (100), Expect = 6e-04
Identities = 35/122 (28%), Positives = 54/122 (44%), Gaps = 8/122 (6%)
Query: 59 IKISALALLKMVMHARSGGTLEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQAQAY 118
+K+++ ALL M +HA EV+GLL G+ +V A P T + +
Sbjct: 577 VKVASEALLIMDLHAHVS-MAEVIGLLGGRYSEVDKVVEVCAAEPCNSLSTGLQCEMDPV 635
Query: 119 EYMTAYIEAAKQVGRHENAIGWYHSHPGYGCWLSGIDVSTQMLNQNF----QEPFVAIVI 174
A A R + IGWYHSHP + S D+ TQ Q++ F+ +++
Sbjct: 636 SQTQASETLAV---RGFSVIGWYHSHPAFDPNPSLRDIDTQAKYQSYFSRGGAKFIGMIV 692
Query: 175 DP 176
P
Sbjct: 693 SP 694
>AL035411-1|CAI21908.1| 828|Homo sapiens myb-like, SWIRM and MPN
domains 1 protein.
Length = 828
Score = 44.4 bits (100), Expect = 6e-04
Identities = 35/122 (28%), Positives = 54/122 (44%), Gaps = 8/122 (6%)
Query: 59 IKISALALLKMVMHARSGGTLEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQAQAY 118
+K+++ ALL M +HA EV+GLL G+ +V A P T + +
Sbjct: 577 VKVASEALLIMDLHAHVS-MAEVIGLLGGRYSEVDKVVEVCAAEPCNSLSTGLQCEMDPV 635
Query: 119 EYMTAYIEAAKQVGRHENAIGWYHSHPGYGCWLSGIDVSTQMLNQNF----QEPFVAIVI 174
A A R + IGWYHSHP + S D+ TQ Q++ F+ +++
Sbjct: 636 SQTQASETLAV---RGFSVIGWYHSHPAFDPNPSLRDIDTQAKYQSYFSRGGAKFIGMIV 692
Query: 175 DP 176
P
Sbjct: 693 SP 694
>AB067502-1|BAB67808.1| 726|Homo sapiens KIAA1915 protein protein.
Length = 726
Score = 44.4 bits (100), Expect = 6e-04
Identities = 35/122 (28%), Positives = 54/122 (44%), Gaps = 8/122 (6%)
Query: 59 IKISALALLKMVMHARSGGTLEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQAQAY 118
+K+++ ALL M +HA EV+GLL G+ +V A P T + +
Sbjct: 475 VKVASEALLIMDLHAHVS-MAEVIGLLGGRYSEVDKVVEVCAAEPCNSLSTGLQCEMDPV 533
Query: 119 EYMTAYIEAAKQVGRHENAIGWYHSHPGYGCWLSGIDVSTQMLNQNF----QEPFVAIVI 174
A A R + IGWYHSHP + S D+ TQ Q++ F+ +++
Sbjct: 534 SQTQASETLAV---RGFSVIGWYHSHPAFDPNPSLRDIDTQAKYQSYFSRGGAKFIGMIV 590
Query: 175 DP 176
P
Sbjct: 591 SP 592
>U94855-1|AAD03467.1| 357|Homo sapiens translation initiation
factor 3 47 kDa subunit protein.
Length = 357
Score = 39.1 bits (87), Expect = 0.023
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 74 RSGGTLEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQAQAYEYMTAYIEAAKQVGR 133
R+ G V+G LLG VD +++ V + F++P +E V A E+ E K+V
Sbjct: 109 RNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEV---AVDMEFAKNMYELHKKVSP 165
Query: 134 HENAIGWY 141
+E +GWY
Sbjct: 166 NELILGWY 173
>CR456959-1|CAG33240.1| 357|Homo sapiens EIF3S5 protein.
Length = 357
Score = 39.1 bits (87), Expect = 0.023
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 74 RSGGTLEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQAQAYEYMTAYIEAAKQVGR 133
R+ G V+G LLG VD +++ V + F++P +E V A E+ E K+V
Sbjct: 109 RNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEV---AVDMEFAKNMYELHKKVSP 165
Query: 134 HENAIGWY 141
+E +GWY
Sbjct: 166 NELILGWY 173
>BT006894-1|AAP35540.1| 357|Homo sapiens eukaryotic translation
initiation factor 3, subunit 5 epsilon, 47kDa protein.
Length = 357
Score = 39.1 bits (87), Expect = 0.023
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 74 RSGGTLEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQAQAYEYMTAYIEAAKQVGR 133
R+ G V+G LLG VD +++ V + F++P +E V A E+ E K+V
Sbjct: 109 RNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEV---AVDMEFAKNMYELHKKVSP 165
Query: 134 HENAIGWY 141
+E +GWY
Sbjct: 166 NELILGWY 173
>BC000490-1|AAH00490.1| 357|Homo sapiens eukaryotic translation
initiation factor 3, subunit 5 epsilon, 47kDa protein.
Length = 357
Score = 39.1 bits (87), Expect = 0.023
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 74 RSGGTLEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQAQAYEYMTAYIEAAKQVGR 133
R+ G V+G LLG VD +++ V + F++P +E V A E+ E K+V
Sbjct: 109 RNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEV---AVDMEFAKNMYELHKKVSP 165
Query: 134 HENAIGWY 141
+E +GWY
Sbjct: 166 NELILGWY 173
>AK095574-1|BAC04577.1| 350|Homo sapiens protein ( Homo sapiens
cDNA FLJ38255 fis, clone FCBBF3001020, highly similar to
EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 5. ).
Length = 350
Score = 39.1 bits (87), Expect = 0.023
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 74 RSGGTLEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQAQAYEYMTAYIEAAKQVGR 133
R+ G V+G LLG VD +++ V + F++P +E V A E+ E K+V
Sbjct: 102 RNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEV---AVDMEFAKNMYELHKKVSP 158
Query: 134 HENAIGWY 141
+E +GWY
Sbjct: 159 NELILGWY 166
>U70735-1|AAD03469.1| 297|Homo sapiens 34 kDa Mov34 homolog
protein.
Length = 297
Score = 37.5 bits (83), Expect = 0.069
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 71 MHARSGGTLEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQAQAYEYMTAYIEAAKQ 130
M ++ G ++V+G L+GK + + VM+SF L E ++ EY E KQ
Sbjct: 28 MRSQEGRPVQVIGALIGKQEGRNIEVMNSFELLSHTVEEKIIIDK---EYYYTKEEQFKQ 84
Query: 131 VGRHENAIGWY 141
V + +GWY
Sbjct: 85 VFKELEFLGWY 95
>BC002520-1|AAH02520.2| 327|Homo sapiens COP9 constitutive
photomorphogenic homolog subunit 6 (Arabidopsis)
protein.
Length = 327
Score = 37.5 bits (83), Expect = 0.069
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 71 MHARSGGTLEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQAQAYEYMTAYIEAAKQ 130
M ++ G ++V+G L+GK + + VM+SF L E ++ EY E KQ
Sbjct: 58 MRSQEGRPVQVIGALIGKQEGRNIEVMNSFELLSHTVEEKIIIDK---EYYYTKEEQFKQ 114
Query: 131 VGRHENAIGWY 141
V + +GWY
Sbjct: 115 VFKELEFLGWY 125
>BX537912-1|CAD97896.1| 234|Homo sapiens hypothetical protein
protein.
Length = 234
Score = 36.3 bits (80), Expect = 0.16
Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 7/101 (6%)
Query: 80 EVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQAQAYEYMTAYIEAAKQVGRHENAIG 139
EV+GLL G+ +V A P T + + A A R + IG
Sbjct: 3 EVIGLLGGRYSEVDKVVEVCAAEPCNSLSTGLQCEMDPVSQTQASETLAV---RGFSVIG 59
Query: 140 WYHSHPGYGCWLSGIDVSTQMLNQNF----QEPFVAIVIDP 176
WYHSHP + S D+ TQ Q++ F+ +++ P
Sbjct: 60 WYHSHPAFDPNPSLRDIDTQAKYQSYFSRGGAKFIGMIVSP 100
>BC010846-1|AAH10846.2| 436|Homo sapiens STAM binding protein-like
1 protein.
Length = 436
Score = 36.3 bits (80), Expect = 0.16
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 9/74 (12%)
Query: 138 IGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVIDP-------VRTISAGKVCLGAF 190
+GW H+HP +LS +D+ T Q +AIV P R +AG + + A
Sbjct: 343 LGWIHTHPTQTAFLSSVDLHTHCSYQLMLPEAIAIVCSPKHKDTGIFRLTNAGMLEVSAC 402
Query: 191 RTYPKGYKPANEEP 204
+ KG+ P +EP
Sbjct: 403 K--KKGFHPHTKEP 414
>AL157394-5|CAI13863.1| 270|Homo sapiens novel Mov34/MPN/PAD-1
family domain containing protein (FLJ31524) protein.
Length = 270
Score = 36.3 bits (80), Expect = 0.16
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 9/74 (12%)
Query: 138 IGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVIDP-------VRTISAGKVCLGAF 190
+GW H+HP +LS +D+ T Q +AIV P R +AG + + A
Sbjct: 177 LGWIHTHPTQTAFLSSVDLHTHCSYQLMLPEAIAIVCSPKHKDTGIFRLTNAGMLEVSAC 236
Query: 191 RTYPKGYKPANEEP 204
+ KG+ P +EP
Sbjct: 237 K--KKGFHPHTKEP 248
>AL157394-4|CAI13862.1| 461|Homo sapiens novel Mov34/MPN/PAD-1
family domain containing protein (FLJ31524) protein.
Length = 461
Score = 36.3 bits (80), Expect = 0.16
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 9/74 (12%)
Query: 138 IGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVIDP-------VRTISAGKVCLGAF 190
+GW H+HP +LS +D+ T Q +AIV P R +AG + + A
Sbjct: 343 LGWIHTHPTQTAFLSSVDLHTHCSYQLMLPEAIAIVCSPKHKDTGIFRLTNAGMLEVSAC 402
Query: 191 RTYPKGYKPANEEP 204
+ KG+ P +EP
Sbjct: 403 K--KKGFHPHTKEP 414
>AL157394-3|CAI13861.1| 436|Homo sapiens novel Mov34/MPN/PAD-1
family domain containing protein (FLJ31524) protein.
Length = 436
Score = 36.3 bits (80), Expect = 0.16
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 9/74 (12%)
Query: 138 IGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVIDP-------VRTISAGKVCLGAF 190
+GW H+HP +LS +D+ T Q +AIV P R +AG + + A
Sbjct: 343 LGWIHTHPTQTAFLSSVDLHTHCSYQLMLPEAIAIVCSPKHKDTGIFRLTNAGMLEVSAC 402
Query: 191 RTYPKGYKPANEEP 204
+ KG+ P +EP
Sbjct: 403 K--KKGFHPHTKEP 414
>AB037794-1|BAA92611.1| 463|Homo sapiens KIAA1373 protein protein.
Length = 463
Score = 36.3 bits (80), Expect = 0.16
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 9/74 (12%)
Query: 138 IGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVIDP-------VRTISAGKVCLGAF 190
+GW H+HP +LS +D+ T Q +AIV P R +AG + + A
Sbjct: 345 LGWIHTHPTQTAFLSSVDLHTHCSYQLMLPEAIAIVCSPKHKDTGIFRLTNAGMLEVSAC 404
Query: 191 RTYPKGYKPANEEP 204
+ KG+ P +EP
Sbjct: 405 K--KKGFHPHTKEP 416
>AB010120-1|BAC77766.1| 436|Homo sapiens AMSH-LP protein.
Length = 436
Score = 36.3 bits (80), Expect = 0.16
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 9/74 (12%)
Query: 138 IGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVIDP-------VRTISAGKVCLGAF 190
+GW H+HP +LS +D+ T Q +AIV P R +AG + + A
Sbjct: 343 LGWIHTHPTQTAFLSSVDLHTHCSYQLMLPEAIAIVCSPKHKDTGIFRLTNAGMLEVSAC 402
Query: 191 RTYPKGYKPANEEP 204
+ KG+ P +EP
Sbjct: 403 K--KKGFHPHTKEP 414
>U73522-1|AAD05037.1| 424|Homo sapiens AMSH protein.
Length = 424
Score = 33.9 bits (74), Expect = 0.85
Identities = 15/39 (38%), Positives = 20/39 (51%)
Query: 138 IGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVIDP 176
+GW H+HP +LS +D+ T Q VAIV P
Sbjct: 331 LGWIHTHPTQTAFLSSVDLHTHCSYQMMLPESVAIVCSP 369
>BC101469-1|AAI01470.1| 424|Homo sapiens STAM binding protein
protein.
Length = 424
Score = 33.9 bits (74), Expect = 0.85
Identities = 15/39 (38%), Positives = 20/39 (51%)
Query: 138 IGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVIDP 176
+GW H+HP +LS +D+ T Q VAIV P
Sbjct: 331 LGWIHTHPTQTAFLSSVDLHTHCSYQMMLPESVAIVCSP 369
>BC101467-1|AAI01468.1| 424|Homo sapiens STAM binding protein
protein.
Length = 424
Score = 33.9 bits (74), Expect = 0.85
Identities = 15/39 (38%), Positives = 20/39 (51%)
Query: 138 IGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVIDP 176
+GW H+HP +LS +D+ T Q VAIV P
Sbjct: 331 LGWIHTHPTQTAFLSSVDLHTHCSYQMMLPESVAIVCSP 369
>BC065574-1|AAH65574.1| 424|Homo sapiens STAM binding protein
protein.
Length = 424
Score = 33.9 bits (74), Expect = 0.85
Identities = 15/39 (38%), Positives = 20/39 (51%)
Query: 138 IGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVIDP 176
+GW H+HP +LS +D+ T Q VAIV P
Sbjct: 331 LGWIHTHPTQTAFLSSVDLHTHCSYQMMLPESVAIVCSP 369
>BC007682-1|AAH07682.1| 424|Homo sapiens STAM binding protein
protein.
Length = 424
Score = 33.9 bits (74), Expect = 0.85
Identities = 15/39 (38%), Positives = 20/39 (51%)
Query: 138 IGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVIDP 176
+GW H+HP +LS +D+ T Q VAIV P
Sbjct: 331 LGWIHTHPTQTAFLSSVDLHTHCSYQMMLPESVAIVCSP 369
>AC073046-1|AAX88908.1| 424|Homo sapiens unknown protein.
Length = 424
Score = 33.9 bits (74), Expect = 0.85
Identities = 15/39 (38%), Positives = 20/39 (51%)
Query: 138 IGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVIDP 176
+GW H+HP +LS +D+ T Q VAIV P
Sbjct: 331 LGWIHTHPTQTAFLSSVDLHTHCSYQMMLPESVAIVCSP 369
>AC007292-1|AAD24592.1| 498|Homo sapiens R31167_1, partial protein
protein.
Length = 498
Score = 33.9 bits (74), Expect = 0.85
Identities = 40/166 (24%), Positives = 72/166 (43%), Gaps = 23/166 (13%)
Query: 58 DIKISALALLKMVMHARSGGTLEVMGLLLGKVDANTMIVMDSFALPVEGT--ETRVNAQA 115
++ +S+ L + H+ + EV+G L G+ D N+ ++ A P + A
Sbjct: 268 NVAVSSNVLFLLDFHSHLTRS-EVVGYLGGRWDVNSQMLTVLRAFPCRSRLGDAETAAAI 326
Query: 116 QAYEYMTAYIEAAKQVGRHENAIGWYHSHPGYGCWLSGIDVSTQMLNQ-------NFQEP 168
+ Y + ++ R + +GWYHSHP S D+ QM Q N +P
Sbjct: 327 EEEIYQSLFL-------RGLSLVGWYHSHPHSPALPSLQDIDAQMDYQLRLQGSSNGFQP 379
Query: 169 FVAIVIDPVRTISAG-KVCLGAFRTYPKGYKPANEEPSEYQTIPLN 213
+A++ P + + G + + F P P + PS+Y IP++
Sbjct: 380 CLALLCSPYYSGNPGPESKISPFWVMP----PPEQRPSDY-GIPMD 420
>BC032652-1|AAH32652.1| 471|Homo sapiens MPN domain containing
protein.
Length = 471
Score = 32.3 bits (70), Expect = 2.6
Identities = 26/105 (24%), Positives = 46/105 (43%), Gaps = 10/105 (9%)
Query: 58 DIKISALALLKMVMHARSGGTLEVMGLLLGKVDANTMIVMDSFALPVEGT--ETRVNAQA 115
++ +S+ L + H+ + EV+G L G+ D N+ ++ A P + A
Sbjct: 271 NVAVSSNVLFLLDFHSHLTRS-EVVGYLGGRWDVNSQMLTVLRAFPCRSRLGDAETAAAI 329
Query: 116 QAYEYMTAYIEAAKQVGRHENAIGWYHSHPGYGCWLSGIDVSTQM 160
+ Y + ++ R + +GWYHSHP S D+ QM
Sbjct: 330 EEEIYQSLFL-------RGLSLVGWYHSHPHSPALPSLQDIDAQM 367
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.317 0.131 0.393
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,339,286
Number of Sequences: 224733
Number of extensions: 1855601
Number of successful extensions: 6587
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 6527
Number of HSP's gapped (non-prelim): 63
length of query: 348
length of database: 73,234,838
effective HSP length: 91
effective length of query: 257
effective length of database: 52,784,135
effective search space: 13565522695
effective search space used: 13565522695
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 66 (30.7 bits)
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