GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002787-TA|BGIBMGA002787-PA|undefined
         (72 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q80Z21 Cluster: Secreted gel-forming mucin; n=9; Tetrap...    32   2.0  
UniRef50_P09441 Cluster: Late embryogenesis abundant protein D-1...    32   2.0  
UniRef50_A6TVJ8 Cluster: Exopolysaccharide biosynthesis protein ...    31   3.4  
UniRef50_A7SIT0 Cluster: Predicted protein; n=3; Eumetazoa|Rep: ...    31   6.0  
UniRef50_UPI00015B431E Cluster: PREDICTED: similar to conserved ...    30   8.0  

>UniRef50_Q80Z21 Cluster: Secreted gel-forming mucin; n=9;
            Tetrapoda|Rep: Secreted gel-forming mucin - Mus musculus
            (Mouse)
          Length = 1726

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 14/25 (56%), Positives = 16/25 (64%)

Query: 2    TPHKYTSTVQSNYSTHTPGYNVGQS 26
            T H Y+STV S  STHTPG +   S
Sbjct: 1516 TEHPYSSTVTSGSSTHTPGLSPSSS 1540


>UniRef50_P09441 Cluster: Late embryogenesis abundant protein
          D-113; n=1; Gossypium hirsutum|Rep: Late embryogenesis
          abundant protein D-113 - Gossypium hirsutum (Upland
          cotton) (Gossypium mexicanum)
          Length = 165

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 12/20 (60%), Positives = 14/20 (70%)

Query: 18 TPGYNVGQSPGYGRTGGRGN 37
          T GYN+G + GYG TGG  N
Sbjct: 80 TAGYNIGDTGGYGGTGGHDN 99


>UniRef50_A6TVJ8 Cluster: Exopolysaccharide biosynthesis protein
           precursor; n=1; Alkaliphilus metalliredigens QYMF|Rep:
           Exopolysaccharide biosynthesis protein precursor -
           Alkaliphilus metalliredigens QYMF
          Length = 942

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 10/19 (52%), Positives = 14/19 (73%)

Query: 4   HKYTSTVQSNYSTHTPGYN 22
           ++YT  +  N+ THTPGYN
Sbjct: 181 YQYTMLIDKNWGTHTPGYN 199


>UniRef50_A7SIT0 Cluster: Predicted protein; n=3; Eumetazoa|Rep:
           Predicted protein - Nematostella vectensis
          Length = 169

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%)

Query: 6   YTSTVQSNY-STHTPGYNVGQSPGYGRTGGRG 36
           Y +T    Y +T  PGY   Q+PGYG T   G
Sbjct: 107 YGTTKNPGYGATENPGYGATQNPGYGATENPG 138


>UniRef50_UPI00015B431E Cluster: PREDICTED: similar to conserved
           hypothetical protein; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to conserved hypothetical protein -
           Nasonia vitripennis
          Length = 531

 Score = 30.3 bits (65), Expect = 8.0
 Identities = 11/24 (45%), Positives = 15/24 (62%)

Query: 11  QSNYSTHTPGYNVGQSPGYGRTGG 34
           Q+ YS  + GY+  Q+PGY   GG
Sbjct: 394 QNKYSNQSSGYSGNQNPGYSNKGG 417


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.306    0.124    0.365 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,081,291
Number of Sequences: 1657284
Number of extensions: 2271540
Number of successful extensions: 2339
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2318
Number of HSP's gapped (non-prelim): 21
length of query: 72
length of database: 575,637,011
effective HSP length: 51
effective length of query: 21
effective length of database: 491,115,527
effective search space: 10313426067
effective search space used: 10313426067
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (22.0 bits)
S2: 65 (30.3 bits)