GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002787-TA|BGIBMGA002787-PA|undefined
         (72 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ302654-1|CAC35519.1|  168|Anopheles gambiae gSG2-like protein ...    25   0.35 
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    22   1.8  
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    22   2.4  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    21   5.6  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    20   7.4  
AJ697727-1|CAG26920.1|  285|Anopheles gambiae putative odorant-b...    20   7.4  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    20   9.8  

>AJ302654-1|CAC35519.1|  168|Anopheles gambiae gSG2-like protein
          protein.
          Length = 168

 Score = 24.6 bits (51), Expect = 0.35
 Identities = 9/24 (37%), Positives = 14/24 (58%)

Query: 13 NYSTHTPGYNVGQSPGYGRTGGRG 36
          N  ++ PG+  GQ PG  + G +G
Sbjct: 52 NSQSNVPGFGNGQQPGQQQQGQQG 75


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
          protein.
          Length = 596

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 13/33 (39%), Positives = 14/33 (42%), Gaps = 1/33 (3%)

Query: 5  KYTSTVQSNYSTHTPGYNVGQSPGY-GRTGGRG 36
          +Y S     Y     GY  G   G  GR GGRG
Sbjct: 48 EYQSNDNGGYGGGDDGYGGGGRGGRGGRGGGRG 80


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 9/44 (20%)

Query: 3   PHKYTSTVQSNYSTH----TP-----GYNVGQSPGYGRTGGRGN 37
           PH +      ++S+H    TP     G + G SPG G TG  G+
Sbjct: 58  PHVFHPQSSPDWSSHENFSTPPQTSLGLSHGPSPGAGGTGSGGS 101


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 7/10 (70%), Positives = 8/10 (80%)

Query: 27  PGYGRTGGRG 36
           PGYGR G +G
Sbjct: 346 PGYGRPGPQG 355


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 7/11 (63%), Positives = 8/11 (72%)

Query: 27  PGYGRTGGRGN 37
           PGYG  G +GN
Sbjct: 500 PGYGIPGQKGN 510


>AJ697727-1|CAG26920.1|  285|Anopheles gambiae putative
           odorant-binding protein OBPjj17 protein.
          Length = 285

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 8/29 (27%), Positives = 13/29 (44%)

Query: 5   KYTSTVQSNYSTHTPGYNVGQSPGYGRTG 33
           +Y    +    T +P Y+   + GY R G
Sbjct: 225 EYDRPYRGRGRTESPRYDYDDNDGYSRGG 253


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
          topoisomerase protein.
          Length = 1039

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 9/23 (39%), Positives = 12/23 (52%)

Query: 14 YSTHTPGYNVGQSPGYGRTGGRG 36
          ++ + PG N GQ    G  G RG
Sbjct: 35 HANYGPGSNNGQEGLKGPGGARG 57


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.306    0.124    0.365 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,703
Number of Sequences: 2123
Number of extensions: 2234
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of query: 72
length of database: 516,269
effective HSP length: 50
effective length of query: 22
effective length of database: 410,119
effective search space:  9022618
effective search space used:  9022618
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.2 bits)
S2: 39 (19.8 bits)