Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002787-TA|BGIBMGA002787-PA|undefined
(72 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 27 1.2
AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated... 27 1.2
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 27 1.2
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 27 1.2
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 27 1.2
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 27 1.2
Z68752-9|CAA92985.1| 1208|Caenorhabditis elegans Hypothetical pr... 27 1.6
Z68316-8|CAA92685.1| 1208|Caenorhabditis elegans Hypothetical pr... 27 1.6
Z81103-7|CAB03211.3| 579|Caenorhabditis elegans Hypothetical pr... 26 2.8
Z81103-5|CAD56592.2| 550|Caenorhabditis elegans Hypothetical pr... 26 2.8
Z81088-12|CAD56587.2| 579|Caenorhabditis elegans Hypothetical p... 26 2.8
AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical ... 25 4.9
Z49969-3|CAA90267.1| 792|Caenorhabditis elegans Hypothetical pr... 25 8.5
U42833-6|AAA83581.1| 1650|Caenorhabditis elegans Hypothetical pr... 25 8.5
AL023838-3|CAA19503.1| 108|Caenorhabditis elegans Hypothetical ... 25 8.5
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 27.5 bits (58), Expect = 1.2
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 5 KYTSTVQSNYSTHTPGYNVGQSPGYGRTGGRG 36
K+T+T NYSTH+ + RT GRG
Sbjct: 18 KFTATEDVNYSTHSSRSSYRSESLTSRTDGRG 49
>AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated
protein 89, isoform e protein.
Length = 5992
Score = 27.5 bits (58), Expect = 1.2
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 5 KYTSTVQSNYSTHTPGYNVGQSPGYGRTGGRG 36
K+T+T NYSTH+ + RT GRG
Sbjct: 18 KFTATEDVNYSTHSSRSSYRSESLTSRTDGRG 49
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 27.5 bits (58), Expect = 1.2
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 5 KYTSTVQSNYSTHTPGYNVGQSPGYGRTGGRG 36
K+T+T NYSTH+ + RT GRG
Sbjct: 18 KFTATEDVNYSTHSSRSSYRSESLTSRTDGRG 49
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 27.5 bits (58), Expect = 1.2
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 5 KYTSTVQSNYSTHTPGYNVGQSPGYGRTGGRG 36
K+T+T NYSTH+ + RT GRG
Sbjct: 18 KFTATEDVNYSTHSSRSSYRSESLTSRTDGRG 49
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 27.5 bits (58), Expect = 1.2
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 5 KYTSTVQSNYSTHTPGYNVGQSPGYGRTGGRG 36
K+T+T NYSTH+ + RT GRG
Sbjct: 18 KFTATEDVNYSTHSSRSSYRSESLTSRTDGRG 49
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 27.5 bits (58), Expect = 1.2
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 5 KYTSTVQSNYSTHTPGYNVGQSPGYGRTGGRG 36
K+T+T NYSTH+ + RT GRG
Sbjct: 18 KFTATEDVNYSTHSSRSSYRSESLTSRTDGRG 49
>Z68752-9|CAA92985.1| 1208|Caenorhabditis elegans Hypothetical
protein K08E4.1 protein.
Length = 1208
Score = 27.1 bits (57), Expect = 1.6
Identities = 11/22 (50%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Query: 14 YSTHTPGYNVGQSPGYGRTGGR 35
Y + TP Y+ G++P YG GGR
Sbjct: 825 YGSMTPAYDGGRTPAYGE-GGR 845
>Z68316-8|CAA92685.1| 1208|Caenorhabditis elegans Hypothetical
protein K08E4.1 protein.
Length = 1208
Score = 27.1 bits (57), Expect = 1.6
Identities = 11/22 (50%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Query: 14 YSTHTPGYNVGQSPGYGRTGGR 35
Y + TP Y+ G++P YG GGR
Sbjct: 825 YGSMTPAYDGGRTPAYGE-GGR 845
>Z81103-7|CAB03211.3| 579|Caenorhabditis elegans Hypothetical
protein M04G12.4a protein.
Length = 579
Score = 26.2 bits (55), Expect = 2.8
Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 3 PHKYTSTVQSNYSTHTPGYNVGQSPGYGRTGG 34
P+ Y +T + Y PG + SP Y RT G
Sbjct: 107 PYAYRATA-TGYMPTVPGLSTNSSPYYPRTSG 137
>Z81103-5|CAD56592.2| 550|Caenorhabditis elegans Hypothetical
protein M04G12.4b protein.
Length = 550
Score = 26.2 bits (55), Expect = 2.8
Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 3 PHKYTSTVQSNYSTHTPGYNVGQSPGYGRTGG 34
P+ Y +T + Y PG + SP Y RT G
Sbjct: 78 PYAYRATA-TGYMPTVPGLSTNSSPYYPRTSG 108
>Z81088-12|CAD56587.2| 579|Caenorhabditis elegans Hypothetical
protein M04G12.4a protein.
Length = 579
Score = 26.2 bits (55), Expect = 2.8
Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 3 PHKYTSTVQSNYSTHTPGYNVGQSPGYGRTGG 34
P+ Y +T + Y PG + SP Y RT G
Sbjct: 107 PYAYRATA-TGYMPTVPGLSTNSSPYYPRTSG 137
>AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical
protein H43E16.1 protein.
Length = 1203
Score = 25.4 bits (53), Expect = 4.9
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 7 TSTVQSNYSTHTPGYNVGQSPGYG 30
T+TV S ST T G +GQ +G
Sbjct: 523 TATVSSGQSTSTFGTTIGQGSSFG 546
>Z49969-3|CAA90267.1| 792|Caenorhabditis elegans Hypothetical
protein W01C9.3 protein.
Length = 792
Score = 24.6 bits (51), Expect = 8.5
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 3 PHKYTSTVQSNYSTHTPGYNVGQS 26
P+ + S + S Y+ PG + G S
Sbjct: 598 PYSFNSNINSGYTNQQPGVSSGNS 621
>U42833-6|AAA83581.1| 1650|Caenorhabditis elegans Hypothetical protein
ZK430.1 protein.
Length = 1650
Score = 24.6 bits (51), Expect = 8.5
Identities = 10/19 (52%), Positives = 11/19 (57%)
Query: 19 PGYNVGQSPGYGRTGGRGN 37
P Y+ SPG GGRGN
Sbjct: 1182 PQYDSAASPGSSVAGGRGN 1200
>AL023838-3|CAA19503.1| 108|Caenorhabditis elegans Hypothetical
protein Y43C5A.3 protein.
Length = 108
Score = 24.6 bits (51), Expect = 8.5
Identities = 14/48 (29%), Positives = 17/48 (35%), Gaps = 4/48 (8%)
Query: 9 TVQSNYSTHTPGYNVGQSPGYGRTGGRGNXXXXXXXXXXXXXARYGNY 56
T + Y ++P Y GYG GG GN Y NY
Sbjct: 18 TADAQYGYYSPYYG----GGYGNYGGYGNYYPSYSSYSYYPSYGYNNY 61
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.306 0.124 0.365
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,725,488
Number of Sequences: 27539
Number of extensions: 47437
Number of successful extensions: 80
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 67
Number of HSP's gapped (non-prelim): 17
length of query: 72
length of database: 12,573,161
effective HSP length: 52
effective length of query: 20
effective length of database: 11,141,133
effective search space: 222822660
effective search space used: 222822660
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (22.0 bits)
S2: 51 (24.6 bits)
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