Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002786-TA|BGIBMGA002786-PA|IPR013032|EGF-like region,
IPR002130|Peptidyl-prolyl cis-trans isomerase, cyclophilin type,
IPR003613|U box
(515 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 348 1e-96
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 152 1e-37
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 149 9e-37
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 111 2e-25
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 105 1e-23
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 102 1e-22
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 100 4e-22
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 91 3e-19
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 75 2e-14
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 32 0.17
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 32 0.22
SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomy... 32 0.22
SPBC839.10 |usp107|snu71|U1 snRNP-associated protein Usp107|Schi... 31 0.38
SPBC354.15 |fap1||L-pipecolate oxidase|Schizosaccharomyces pombe... 31 0.51
SPBC216.03 |||conserved fungal protein|Schizosaccharomyces pombe... 30 0.67
SPBC947.06c |||spermidine family transporter |Schizosaccharomyce... 30 0.89
SPBC685.09 |orc2|orp2|origin recognition complex subunit Orc2|Sc... 30 0.89
SPBC29A10.10c |||tRNA-splicing endonuclease positive effector |S... 29 1.6
SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces... 29 1.6
SPAC32A11.04c |tif212|tif22, SPAC6B12.17c|translation initiation... 29 1.6
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 28 2.7
SPAC20H4.08 |||phosphatase activator |Schizosaccharomyces pombe|... 28 2.7
SPBC8D2.16c |||DUF171 family protein|Schizosaccharomyces pombe|c... 27 4.7
SPAC823.16c |mug179||WD repeat protein Mug179|Schizosaccharomyce... 27 4.7
SPACUNK4.08 |||dipeptidyl aminopeptidase |Schizosaccharomyces po... 27 4.7
SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|ch... 27 6.3
SPBC19C7.01 ||SPBC32F12.13c|Mago binding protein homolog|Schizos... 27 6.3
SPBC14F5.08 |med7||mediator complex subunit Med7|Schizosaccharom... 27 6.3
SPAC22E12.11c |set3||histone lysine methyltransferase Set3|Schiz... 27 6.3
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 27 6.3
SPCC663.11 |||ww domain binding protein 11 |Schizosaccharomyces ... 27 8.3
SPAC9.05 |mfh1||ATP-dependent DNA helicase Mfh1 |Schizosaccharom... 27 8.3
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 348 bits (856), Expect = 1e-96
Identities = 203/521 (38%), Positives = 282/521 (54%), Gaps = 24/521 (4%)
Query: 9 DKMYLTYTEWTTLYG--GKRSGTATEEDTT-FKRLPFDHCCLCLQPFDDPYCDADGN--- 62
DK+Y+T TE + ++G G SG A + TT +K+LPF++C L LQPF+ P C D
Sbjct: 6 DKLYITQTEHSGVHGWHGGMSGIAQKNSTTSYKQLPFNYCSLSLQPFNHPCCLVDETKQA 65
Query: 63 -VFELQAIIDFRKKFKINPVTGKKLDIKTLIKLNFFKNAEDAYHCPVLFKPFTKNSHIVA 121
+F+ + I+ + +K NP+ G+K + LIKL F KN+ + Y PV K FT+ SHIVA
Sbjct: 66 IIFDFRFIVPWLRKHGTNPINGQKASMSDLIKLKFAKNSAEEYCDPVTMKSFTRFSHIVA 125
Query: 122 IRTSGNVYSYEAVEQLNIKGKNWKDLVDDTPFAARNDIITIQDPQNLAKFNISNFHHIKH 181
IR++GN +S++ +E+LNIK K+W+DLV++ F R+DIITIQDP N+ + S K
Sbjct: 126 IRSTGNCFSWDTIERLNIKPKHWRDLVNEEQFT-RDDIITIQDPHNVENRDFSAIQKQKE 184
Query: 182 NLRVETEEEIALKKDPHARLKTVSAETKDILQELEKDYKAPEKKEDQKESADKFNAAHYS 241
R +E+I K L+ A++ + E + K + + A ++
Sbjct: 185 TAR---DEKITKAK---IALQASRAKSTESTSSPELSHSLDSSKSIASDMP--IHRASHT 236
Query: 242 TGKVAASFTSTAMVPETTHEAAIICEDEVI--YERTKKKGYVRLVTNVGHLNFELYCDVT 299
TG AAS TST+ P T +E AII E++ + + R K KGY R+VTN G +N EL+ D
Sbjct: 237 TGYAAASLTSTSFTPVTKNERAIIAEEDYMLNHTRIKHKGYARIVTNHGEINIELHTDYA 296
Query: 300 PKTCHNFMTHCKNGYYNGTKFHRSIRNFMIQXXXXXXXXXXXESIWKKPFDDEIKPNLHH 359
P +NF+ K GYY T FHR+I FMIQ +SIW KPF DE L H
Sbjct: 297 PHAVYNFVQLAKQGYYRNTIFHRNIARFMIQGGDPSGTGRGGQSIWGKPFKDEFCNPLKH 356
Query: 360 TGRGVLSMANSGTNTNGSQFFITFRSCKQLDGKHTIFGKLVGGLDTLNAMESIEVDNKDR 419
RG++SMAN G NTNGSQFFI + K LD KHTIFG++VGGL+ L+A+E + ++ D
Sbjct: 357 DDRGIISMANRGKNTNGSQFFILYGPAKHLDNKHTIFGRVVGGLNVLDALEKVPTNSNDH 416
Query: 420 PIQDIVIEAAQVFVDPFXXXXXXXXXXXXXXXXXXXXXXDPG-----VRPKKATQPLKVF 474
P I +E +FVDPF + R A+
Sbjct: 417 PKLPIKLEDIIIFVDPFEEWKKDEREKEKRKRQEEEEENNLDRTSWTGRDLSASSTDHSL 476
Query: 475 REGVGKYLNLQESATKPGKDQEIPAKKPKKDVTSFGNFDTW 515
VGKYL + S + + KK KK T FGNFD W
Sbjct: 477 NASVGKYLKKEVSLEEKTFTSTVNPKK-KKARTGFGNFDAW 516
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 152 bits (369), Expect = 1e-37
Identities = 74/146 (50%), Positives = 90/146 (61%)
Query: 281 VRLVTNVGHLNFELYCDVTPKTCHNFMTHCKNGYYNGTKFHRSIRNFMIQXXXXXXXXXX 340
V L T++G + ELY + PKTC NF T K GYY+G FHR I +F+IQ
Sbjct: 4 VELQTSLGKILIELYTEHAPKTCQNFYTLAKEGYYDGVIFHRVIPDFVIQGGDPTGTGRG 63
Query: 341 XESIWKKPFDDEIKPNLHHTGRGVLSMANSGTNTNGSQFFITFRSCKQLDGKHTIFGKLV 400
SI+ FDDEI +LHHTG G+LSMAN+G NTN SQFFIT LDGKHTIFG++V
Sbjct: 64 GTSIYGDKFDDEIHSDLHHTGAGILSMANAGPNTNSSQFFITLAPTPWLDGKHTIFGRVV 123
Query: 401 GGLDTLNAMESIEVDNKDRPIQDIVI 426
GL M I D+ DRPI+ + I
Sbjct: 124 SGLSVCKRMGLIRTDSSDRPIEPLKI 149
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 149 bits (361), Expect = 9e-37
Identities = 71/138 (51%), Positives = 86/138 (62%)
Query: 285 TNVGHLNFELYCDVTPKTCHNFMTHCKNGYYNGTKFHRSIRNFMIQXXXXXXXXXXXESI 344
T G ++ +LY + PK NF TH +NGYY+ T FHR I+NFMIQ ESI
Sbjct: 461 TTQGDISIKLYPEEAPKAVQNFTTHAENGYYDNTIFHRIIKNFMIQGGDPLGDGTGGESI 520
Query: 345 WKKPFDDEIKPNLHHTGRGVLSMANSGTNTNGSQFFITFRSCKQLDGKHTIFGKLVGGLD 404
WKK F+DEI PNL H +SMANSG NTNGSQFFIT LDGKHTIF + GLD
Sbjct: 521 WKKDFEDEISPNLKHDRPFTVSMANSGPNTNGSQFFITTDLTPWLDGKHTIFARAYAGLD 580
Query: 405 TLNAMESIEVDNKDRPIQ 422
++ +E E D DRP++
Sbjct: 581 VVHRIEQGETDKYDRPLE 598
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 111 bits (267), Expect = 2e-25
Identities = 64/145 (44%), Positives = 86/145 (59%), Gaps = 12/145 (8%)
Query: 292 FELYCDVTPKTCHNFMTHCKNGY--------YNGTKFHRSIRNFMIQXXXXXXXXXXX-E 342
FEL+ +V PKT NF + C NG+ Y G++FHR I+NFM+Q E
Sbjct: 21 FELFDNVVPKTVKNFASLC-NGFEKDGRCLTYKGSRFHRVIKNFMLQGGDFTRGNGTGGE 79
Query: 343 SIWKKPFDDEIKPNLHHTGRGVLSMANSGTNTNGSQFFITFRSCKQLDGKHTIFGKLVGG 402
SI+ + F+DE L H +LSMAN+G NTNGSQFFIT LDGKH +FGK++ G
Sbjct: 80 SIYGEKFEDE-NFELKHDKPFLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGKVIQG 138
Query: 403 LDTLNAMESIEVDNKDRPIQDIVIE 427
T+ +E++E N D P+ +VIE
Sbjct: 139 KSTVRTIENLETKNDD-PVVPVVIE 162
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 105 bits (252), Expect = 1e-23
Identities = 54/144 (37%), Positives = 76/144 (52%), Gaps = 1/144 (0%)
Query: 279 GYVRLVTNVGHLNFELYCDVTPKTCHNFMTHCKNGYYNGTKFHRSIRNFMIQXXXXXXXX 338
G V L T G + EL+C PK C NF+ C GYY+GT HR + F+IQ
Sbjct: 13 GTVILKTTRGDIQIELWCKEVPKACRNFIQLCLEGYYDGTIVHRVVPEFLIQGGDPTGTG 72
Query: 339 XXXESIWKKPFDDEIKPNLHHTGRGVLSMANSGTNTNGSQFFITFRSCKQLDGKHTIFGK 398
ESI+ +PF E P L RG++ MA + N SQFFIT + +GK T+FG+
Sbjct: 73 MGGESIYGEPFAVETHPRLRFIRRGLVGMACTENEGNNSQFFITLGPTPEWNGKQTLFGR 132
Query: 399 LVGG-LDTLNAMESIEVDNKDRPI 421
+VG + + + +E+D RP+
Sbjct: 133 VVGDTIYNVVRISELELDANQRPV 156
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 102 bits (244), Expect = 1e-22
Identities = 57/150 (38%), Positives = 85/150 (56%), Gaps = 6/150 (4%)
Query: 287 VGHLNFELYCDVTPKTCHNF--MTHCKNGY-YNGTKFHRSIRNFMIQXXXXXXXXXXX-E 342
+G + L+ PKT NF + + G+ Y G+ FHR I NFMIQ +
Sbjct: 40 LGRVTIGLFGKTVPKTAENFRALATGEKGFGYEGSIFHRVIPNFMIQGGDITKGDGTGGK 99
Query: 343 SIWKKPFDDEIKPNLHHTGRGVLSMANSGTNTNGSQFFITFRSCKQLDGKHTIFGKLVGG 402
SI+ F DE L H G+LSMAN+G ++NGSQFFIT LDG H +FG+++ G
Sbjct: 100 SIYGSRFPDE-NFKLSHQRPGLLSMANAGPDSNGSQFFITTVKTPWLDGHHVVFGEVLSG 158
Query: 403 LDTLNAMESIEVDNKDRPIQDI-VIEAAQV 431
D + + E DN+D+P++D+ +I++ Q+
Sbjct: 159 YDIVKKISKAETDNRDKPLEDVKIIKSGQL 188
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 100 bits (240), Expect = 4e-22
Identities = 57/130 (43%), Positives = 76/130 (58%), Gaps = 5/130 (3%)
Query: 287 VGHLNFELYCDVTPKTCHNFMTHC--KNGY-YNGTKFHRSIRNFMIQXXXXXXXXXXX-E 342
+G + F+L+ DV PKT NF C + GY Y G+ FHR I FM+Q +
Sbjct: 15 LGRIVFKLFDDVVPKTAANFRALCTGEKGYGYAGSTFHRVIPQFMLQGGDFTRGNGTGGK 74
Query: 343 SIWKKPFDDEIKPNLHHTGRGVLSMANSGTNTNGSQFFITFRSCKQLDGKHTIFGKLVGG 402
SI+ + F DE L H G+LSMAN+G NTNGSQFFIT LDGKH +FG++ G
Sbjct: 75 SIYGEKFPDE-NFALKHNKPGLLSMANAGPNTNGSQFFITTVVTPWLDGKHVVFGEVTEG 133
Query: 403 LDTLNAMESI 412
+D + +ES+
Sbjct: 134 MDVVKKVESL 143
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 91.1 bits (216), Expect = 3e-19
Identities = 55/152 (36%), Positives = 74/152 (48%), Gaps = 14/152 (9%)
Query: 287 VGHLNFELYCDVTPKTCHNFMTHCKN----------GYYNGTKFHRSIRNFMIQXXXXXX 336
+G + L+ + PKT NF C GY N T FHR I+ FMIQ
Sbjct: 18 LGRIKIRLFSSIVPKTAENFRQFCTGETLGVNQKPIGYKNST-FHRIIQGFMIQGGDFVS 76
Query: 337 XXXXXESIW--KKPFDDEIKPNLHHTGRGVLSMANSGTNTNGSQFFITFRSCKQLDGKHT 394
+ + F DE L H G+LSMAN+G ++NG QFFIT C LDGKH
Sbjct: 77 GDGTGSATIFNSRTFPDE-NFTLKHDRPGLLSMANAGKDSNGCQFFITTVPCDFLDGKHV 135
Query: 395 IFGKLVGGLDTLNAMESIEVDNKDRPIQDIVI 426
+FG+++ G D + +ES V RP ++ I
Sbjct: 136 VFGEVIEGYDIVKEIESTPVGANSRPKSNVAI 167
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 75.4 bits (177), Expect = 2e-14
Identities = 51/171 (29%), Positives = 79/171 (46%), Gaps = 15/171 (8%)
Query: 281 VRLVTNVGHLNFELYCDVTPKTCHNFMTHCKNGYYNGTKFHRSIRNFMIQXXX-XXXXXX 339
V + T VG L +L+ PKTC NF+ CK YYN F+ N+ Q
Sbjct: 3 VLIETTVGDLVIDLFVKEAPKTCENFLKLCKLKYYNFCPFYNIQHNYTCQTGDPLGPTGD 62
Query: 340 XXESIWK------KPFDDEIKPNLHHTGRGVLSMANSGTNTN-------GSQFFITFR-S 385
+W + F E P+L H G++SM+ + ++ GSQF IT +
Sbjct: 63 GGRCVWNVLNKGTRFFKAEFNPSLVHNKMGLVSMSTATISSRDDKLLVCGSQFIITLSDN 122
Query: 386 CKQLDGKHTIFGKLVGGLDTLNAMESIEVDNKDRPIQDIVIEAAQVFVDPF 436
+ LD ++ I+G++ G DTL + D + +P +DI I+ + DPF
Sbjct: 123 LEGLDERYPIYGQVAEGFDTLLKINDAICDEEGQPYRDIRIKHTIILDDPF 173
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 32.3 bits (70), Expect = 0.17
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 4/98 (4%)
Query: 197 PHARLKTVSAETKDILQELEKDYKAPEKKEDQKESADKFNAAHYSTGKVAASFTSTAMVP 256
P A+ KT + K + +K+ AP +E +SAD A S A + A P
Sbjct: 152 PAAQSKTETPAPKVTSESTKKETAAPPPQETPTKSADAELAKTPSAPAAALKKAAEAAEP 211
Query: 257 ETTHEAAIICEDEVIYERTKK---KGYVRLVTNVGHLN 291
T E A ++EV E K K +V +V +GH++
Sbjct: 212 ATVTEDATDLQNEVDQELLKDMYGKEHVNIVF-IGHVD 248
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 31.9 bits (69), Expect = 0.22
Identities = 18/76 (23%), Positives = 36/76 (47%)
Query: 186 ETEEEIALKKDPHARLKTVSAETKDILQELEKDYKAPEKKEDQKESADKFNAAHYSTGKV 245
E+EEE+ +K + + S+ + + +E E K EKKE +S+ + +++ +
Sbjct: 121 ESEEEVIVKTEEKKESSSESSSSSESEEEEEAVVKIEEKKESSSDSSSESSSSESESESS 180
Query: 246 AASFTSTAMVPETTHE 261
++ V E T E
Sbjct: 181 SSESEEEEEVVEKTEE 196
Score = 27.5 bits (58), Expect = 4.7
Identities = 18/99 (18%), Positives = 46/99 (46%), Gaps = 2/99 (2%)
Query: 180 KHNLRVETEEEIALKKDPHARLKTVSAETKDILQELEKDYKAPEKKEDQKESADKFNAAH 239
K + ++ +++ KK + S E + ++K K+ +K+E ES + +++
Sbjct: 38 KEIAKQSSKTDVSPKKSKKEAKRASSPEPSK--KSVKKQKKSKKKEESSSESESESSSSE 95
Query: 240 YSTGKVAASFTSTAMVPETTHEAAIICEDEVIYERTKKK 278
+ + +S+ ++ ++ E+EVI + +KK
Sbjct: 96 SESSSSESESSSSESESSSSESSSSESEEEVIVKTEEKK 134
>SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 648
Score = 31.9 bits (69), Expect = 0.22
Identities = 18/85 (21%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 185 VETEEEIALKKDPHARLKTVSAETKDILQELEKDYKAPEKKEDQKESADKFNAAHYSTGK 244
+E E + +K P +K V E ++ ++ KD K ++K+DQKE+++K ++
Sbjct: 30 LEEIEGVDIKYQPKGAMKEVIYELPEVHEK--KDKKPEKRKKDQKEASEKKKKGKRTSPT 87
Query: 245 VAASFTSTAMVPETTHEAAIICEDE 269
+ + + + + +E + + E++
Sbjct: 88 IEMTSLGSKVTSKNYNEFSTLEEED 112
>SPBC839.10 |usp107|snu71|U1 snRNP-associated protein
Usp107|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 31.1 bits (67), Expect = 0.38
Identities = 24/108 (22%), Positives = 48/108 (44%), Gaps = 2/108 (1%)
Query: 172 NISNFHHIKHNLRVETEEEIALKKDPHARLKTVSAETKDILQELEKDYKAPEKKEDQKES 231
N ++ I L EEEI +D A K +KD L K+Y E+++ +K++
Sbjct: 296 NAADLEGINPELLPVIEEEIRSFRDQSAMKKREKQRSKDEYASLYKEYTRKEQEKLRKQN 355
Query: 232 ADKFN-AAHYSTGKVAASFTSTAMVPETTHEAAIICEDEVIYERTKKK 278
D N + + ++ S + + E + + +++ YE ++K
Sbjct: 356 DDLQNLLSKHRISRIPMSTVNAFLRAEDSIPES-FSDEQAYYEEKRRK 402
>SPBC354.15 |fap1||L-pipecolate oxidase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 412
Score = 30.7 bits (66), Expect = 0.51
Identities = 17/77 (22%), Positives = 35/77 (45%)
Query: 238 AHYSTGKVAASFTSTAMVPETTHEAAIICEDEVIYERTKKKGYVRLVTNVGHLNFELYCD 297
A+ + + A+ TA + H + V Y + + Y+R +TN +L+F+
Sbjct: 195 AYMAEKLIFATGAWTASLLPNDHTRFLATGQPVAYIKLTPEEYIRFLTNPVYLDFDTGFY 254
Query: 298 VTPKTCHNFMTHCKNGY 314
+ P T ++ ++GY
Sbjct: 255 IFPPTPDGYLKFARHGY 271
>SPBC216.03 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 247
Score = 30.3 bits (65), Expect = 0.67
Identities = 15/52 (28%), Positives = 27/52 (51%)
Query: 92 IKLNFFKNAEDAYHCPVLFKPFTKNSHIVAIRTSGNVYSYEAVEQLNIKGKN 143
I +N + E+ +LF ++ H+V T GNV Y+A+ +KG++
Sbjct: 190 ISINCMMSRENVARTVLLFALDNQSIHLVVDMTDGNVPIYKAIAGFVVKGES 241
>SPBC947.06c |||spermidine family transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 498
Score = 29.9 bits (64), Expect = 0.89
Identities = 16/39 (41%), Positives = 18/39 (46%)
Query: 222 PEKKEDQKESADKFNAAHYSTGKVAASFTSTAMVPETTH 260
PEK + S N A Y AA F ST M P T+H
Sbjct: 44 PEKPLNWPVSIKLLNTALYGLTTFAAQFNSTTMSPTTSH 82
>SPBC685.09 |orc2|orp2|origin recognition complex subunit
Orc2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 29.9 bits (64), Expect = 0.89
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Query: 281 VRLVTNVGHLNFELYCDVTPKTCHNFMTHCKN---GYYNGTKFHRSI 324
V + +V H+NF L D + ++ NF+ H YYN T + S+
Sbjct: 367 VYFIASVDHVNFALLWDTSLESSFNFVMHDATTFARYYNETTYENSL 413
>SPBC29A10.10c |||tRNA-splicing endonuclease positive effector
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1944
Score = 29.1 bits (62), Expect = 1.6
Identities = 24/97 (24%), Positives = 42/97 (43%), Gaps = 5/97 (5%)
Query: 194 KKDPHARLKTVSAETKDILQELEKDYKAPEKKEDQKESADKFNAAHYSTGKVAASFTSTA 253
K++ H K + ++ ++ + E+D P K+ K S D+ AA K +S++
Sbjct: 1823 KQEAHKVKKRHNIDSANLSRGTERDEDIPNKRAKNKVSTDQ-TAADNKVTKPRLDESSSS 1881
Query: 254 MVPETTHEAAIICEDEVIYERTKKKGYVRLVTNVGHL 290
I E E+ +KK GYV + GH+
Sbjct: 1882 KQDVLNK----IDESEIEQASSKKPGYVEKNKDKGHM 1914
>SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 796
Score = 29.1 bits (62), Expect = 1.6
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 288 GHLNFELYCDVTPKTCHNFMTHCKNGYYNGTKFHRSIRNFMIQ 330
GH + + + PK + F + C +G F S+ NF +Q
Sbjct: 139 GHSRYVMSLAINPKDTNTFASSCLDGTVKVWSFGSSVANFTLQ 181
>SPAC32A11.04c |tif212|tif22, SPAC6B12.17c|translation initiation
factor eIF2 beta subunit|Schizosaccharomyces pombe|chr
1|||Manual
Length = 321
Score = 29.1 bits (62), Expect = 1.6
Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 8/103 (7%)
Query: 192 ALKKDPHARLKTVSAE--TKDILQEL-EKDYKAPEKKEDQKESAD----KFNAAHYSTGK 244
++KK ++ + SAE T+DI E E D+ + +KK+ +K+SAD + STG
Sbjct: 82 SMKKKKKSKKSSASAEEQTEDITTESGELDFSSMKKKKKKKKSADLSAFEKELEASSTGD 141
Query: 245 VAASFTSTAMVPETTHEAAIICED-EVIYERTKKKGYVRLVTN 286
+ + E E A + D + Y + + L TN
Sbjct: 142 ATSDLSKQTFDSENMGEHAWLKSDRDYYYPELLNRFFTLLRTN 184
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 28.3 bits (60), Expect = 2.7
Identities = 35/136 (25%), Positives = 63/136 (46%), Gaps = 24/136 (17%)
Query: 166 QNLAKFNISNFHHIKHNLRVETEE-------------EI-ALKKDPHARLKTVSAETKDI 211
+NL K +++ F H+K L + +E EI +LK H ++ S++ + I
Sbjct: 1422 ENLKKSSLTRFAHLKQELTNKNKELTSKNAENEAMQKEIESLKDSNHQLQESASSDAEQI 1481
Query: 212 LQELEKDYKAPEKKEDQKESADKFNAAHYSTGKVAASFTSTAMVPETTHEAAIICEDEVI 271
+E + K+ EK+ +KE AD N + S A+ + E + + E E+
Sbjct: 1482 TKEQFEQLKS-EKERTEKELADSKNELEH--------LQSEAVDADGKTEISNL-EKEIH 1531
Query: 272 YERTKKKGYVRLVTNV 287
R+ K+G V+ V N+
Sbjct: 1532 ELRSDKEGLVQQVQNL 1547
>SPAC20H4.08 |||phosphatase activator |Schizosaccharomyces pombe|chr
1|||Manual
Length = 270
Score = 28.3 bits (60), Expect = 2.7
Identities = 17/77 (22%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Query: 94 LNFFKNAEDAYHCPVLFKPFTKNSHIVAIRTSGNVYSYEAVEQLNIKGKNWKDLVDDTPF 153
L FK + +AY + F P + + ++ + N+Y + + + + K DL++ T
Sbjct: 94 LPLFKKSNNAYPSKIAFNPISNTTLVLFLTECCNIYLF-SENKKPVDQKIRSDLLEQT-- 150
Query: 154 AARNDIITIQDPQNLAK 170
ND+ D + + K
Sbjct: 151 FKNNDVFESADKKKIRK 167
>SPBC8D2.16c |||DUF171 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 315
Score = 27.5 bits (58), Expect = 4.7
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
Query: 142 KNWKDLVDDTPFAARNDIITIQDPQNLAKFNISNFHHIKHNLRVETEEEIALKKDPHARL 201
+N K + F R I+T PQ K+ I+ + HN+ V + +A + RL
Sbjct: 121 RNDKASTVNIEFPYREGIVTHPSPQAKNKYIINA--GLSHNVIVSSPSVLAPRTRVTVRL 178
Query: 202 KTVSAETKDILQELEKDYKAPEKK 225
K S + LQ + AP +K
Sbjct: 179 KAQSPNEEGQLQGDIVSFSAPREK 202
>SPAC823.16c |mug179||WD repeat protein Mug179|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 335
Score = 27.5 bits (58), Expect = 4.7
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Query: 104 YHCPVLFKPFTKNSHIVAIRTSGNVYSYEAVEQLNIKGKNWKDLVDDTPFAARNDIITIQ 163
Y PVL FT N +V I+ S VY+ + +E +N + +++ FA + +
Sbjct: 85 YPSPVLSVRFTWNRLVVLIKGSIYVYNLKNMELINTLNTSKGNVI---AFAVHENYVAYN 141
Query: 164 DPQN 167
P N
Sbjct: 142 SPTN 145
>SPACUNK4.08 |||dipeptidyl aminopeptidase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 793
Score = 27.5 bits (58), Expect = 4.7
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
Query: 140 KGKNWKDL--VDDTPFAARNDIITIQDPQNLAK--FNISN 175
K NW D + DT D+I IQDP NL K F++S+
Sbjct: 70 KQVNWIDSQGLKDTFLVKYGDLINIQDPYNLNKTLFSVSD 109
>SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 161
Score = 27.1 bits (57), Expect = 6.3
Identities = 16/51 (31%), Positives = 24/51 (47%)
Query: 184 RVETEEEIALKKDPHARLKTVSAETKDILQELEKDYKAPEKKEDQKESADK 234
R ET+E +A + A+LK V + QE E + E E Q E ++
Sbjct: 12 RAETDEAVARAEAAEAKLKEVELQLSLKEQEYESLSRKSEAAESQLEELEE 62
>SPBC19C7.01 ||SPBC32F12.13c|Mago binding protein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 196
Score = 27.1 bits (57), Expect = 6.3
Identities = 15/48 (31%), Positives = 24/48 (50%)
Query: 208 TKDILQELEKDYKAPEKKEDQKESADKFNAAHYSTGKVAASFTSTAMV 255
+KD ++ L+K Y + + K+D K + K A + G S TS V
Sbjct: 122 SKDSVKHLDKTYSSIDSKKDFKYNFPKTQAPEWRRGAKPLSKTSEPSV 169
>SPBC14F5.08 |med7||mediator complex subunit
Med7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 376
Score = 27.1 bits (57), Expect = 6.3
Identities = 18/77 (23%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Query: 172 NISNFHHIKHNLRVETEEEIALKKDPHARLKTVSAETKDILQELEKDYKAPEKKEDQKES 231
+ + H N +E E+ L+ D H +K E+ ++++E+ + P K+++++
Sbjct: 125 SFTRVHDYDKNSPIENEK--ILEDDQHTAMKEKDNESDKTMKDVEEKTE-PSLKKEEEDI 181
Query: 232 ADKFNAAHYSTGKVAAS 248
K TG V+AS
Sbjct: 182 QMKEPLDSQDTGAVSAS 198
>SPAC22E12.11c |set3||histone lysine methyltransferase
Set3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 859
Score = 27.1 bits (57), Expect = 6.3
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 352 EIKPNLHHTGRGVLSMANSGTNTNGSQFFITFRSCKQLDGKH 393
++ P+ H L + S +GS FF T R+ K H
Sbjct: 655 KVHPSFHRNSDSKLKLEPSSKEKSGSMFFNTLRTVKDKSHVH 696
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 27.1 bits (57), Expect = 6.3
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 343 SIWKKPFDDEIKPNLHHTGRGVLS--MANSGTNTNGSQFF 380
S+ K+P +I +HH RG+L+ N GT + G F
Sbjct: 332 SLDKRPLLAKIFKVIHHASRGILTYVRVNEGTLSRGMMMF 371
>SPCC663.11 |||ww domain binding protein 11 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 278
Score = 26.6 bits (56), Expect = 8.3
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Query: 163 QDPQNLAKFNISNFHHIKHNLRVETEEEIALKKDPHARLKTVSAETKDILQELEKDYKAP 222
+DP+ K N S KH+ + + A K +A TKDI +E +Y A
Sbjct: 164 EDPKPREKKNKS--FKPKHHKKQDINASSAQPKS--TTTTEAAANTKDIEEETMIEYSAQ 219
Query: 223 EKKEDQKESADKFNAAHYSTGKVA 246
D ++ A +F A + K+A
Sbjct: 220 PVVRDLRQEAAQFLPAAFQRQKLA 243
>SPAC9.05 |mfh1||ATP-dependent DNA helicase Mfh1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 834
Score = 26.6 bits (56), Expect = 8.3
Identities = 22/96 (22%), Positives = 42/96 (43%), Gaps = 1/96 (1%)
Query: 121 AIRTSGNVYSYEAVEQLNIKGKNWKDL-VDDTPFAARNDIITIQDPQNLAKFNISNFHHI 179
A R++GN E V L++ KN++ L + TP I + D ++++ I + I
Sbjct: 198 AHRSTGNYAYVEVVHLLSLSNKNFRILALSATPGNKLEAIQNVIDSLHISRIEIRTENSI 257
Query: 180 KHNLRVETEEEIALKKDPHARLKTVSAETKDILQEL 215
+ V+ +E D A + + IL+ +
Sbjct: 258 DISQYVQKKEVDFFPVDLSAEITDIRDRFSSILEPM 293
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.135 0.405
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,430,836
Number of Sequences: 5004
Number of extensions: 105148
Number of successful extensions: 363
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 320
Number of HSP's gapped (non-prelim): 43
length of query: 515
length of database: 2,362,478
effective HSP length: 76
effective length of query: 439
effective length of database: 1,982,174
effective search space: 870174386
effective search space used: 870174386
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 56 (26.6 bits)
- SilkBase 1999-2023 -