GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002785-TA|BGIBMGA002785-PA|IPR003533|Doublecortin,
IPR001680|WD-40 repeat, IPR011046|WD40-like, IPR011047|Quinonprotein
alcohol dehydrogenase-like
         (717 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            29   0.32 
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    26   3.0  
U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase...    25   5.3  
U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase...    25   5.3  

>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 29.5 bits (63), Expect = 0.32
 Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 8/57 (14%)

Query: 221  GVSAVAF----SQLNGGSYVLAVDAGRESILSVWQWQWGHLLGKVATLQEELTGAAF 273
            G+S  AF    S   GG ++ +     +  L  W+W W     K AT+   L GA+F
Sbjct: 2822 GISRTAFVIVTSGATGGFFLYSGSMANDGNLRFWEWDW----SKPATVWGALEGASF 2874


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 26.2 bits (55), Expect = 3.0
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)

Query: 374 EKDRKIAAWDSLQN--YKRITET-KLPETAG 401
           EK+R +A WD+ +N  YK+ T T K P  AG
Sbjct: 806 EKERMMAKWDTGENPIYKQATTTFKNPTYAG 836


>U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 260

 Score = 25.4 bits (53), Expect = 5.3
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 268 LTGAAFHPLDDNLLITHGKGHLAFW 292
           L   A+HP +    + HG GH+  W
Sbjct: 90  LPNQAYHPKNTIKTLKHGGGHVMVW 114


>U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 332

 Score = 25.4 bits (53), Expect = 5.3
 Identities = 8/21 (38%), Positives = 13/21 (61%)

Query: 272 AFHPLDDNLLITHGKGHLAFW 292
           A+HP +    ++HG GH+  W
Sbjct: 166 AYHPKNTIKTLSHGGGHVMVW 186


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.320    0.136    0.417 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 704,578
Number of Sequences: 2123
Number of extensions: 29111
Number of successful extensions: 80
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 77
Number of HSP's gapped (non-prelim): 5
length of query: 717
length of database: 516,269
effective HSP length: 69
effective length of query: 648
effective length of database: 369,782
effective search space: 239618736
effective search space used: 239618736
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 51 (24.6 bits)