GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002784-TA|BGIBMGA002784-PA|IPR003533|Doublecortin
         (196 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    26   0.87 
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    23   4.6  

>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 25.8 bits (54), Expect = 0.87
 Identities = 11/42 (26%), Positives = 21/42 (50%)

Query: 86  WKARRVTFYRNGDPFHPGVEFRFKPGRDLASIDALLDRLSER 127
           W+A   T ++   P+   ++F+F  GR+  +  A+   L  R
Sbjct: 92  WRAYDPTGFQRTSPYDSAMDFQFGEGRECVNCGAISTPLWRR 133


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.4 bits (48), Expect = 4.6
 Identities = 9/28 (32%), Positives = 18/28 (64%)

Query: 155 ASYVVSSYKTFKYSYRSVVLRRYAIATF 182
           A+ V +S+K+ ++S  +  +  YA+ TF
Sbjct: 594 AAAVANSFKSEQFSSAAAAVANYALGTF 621


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.324    0.141    0.433 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,642
Number of Sequences: 2123
Number of extensions: 6796
Number of successful extensions: 55
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 53
Number of HSP's gapped (non-prelim): 2
length of query: 196
length of database: 516,269
effective HSP length: 61
effective length of query: 135
effective length of database: 386,766
effective search space: 52213410
effective search space used: 52213410
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 46 (22.6 bits)