Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002784-TA|BGIBMGA002784-PA|IPR003533|Doublecortin
(196 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC027925-1|AAH27925.1| 360|Homo sapiens doublecortex; lissencep... 68 2e-11
AL450490-2|CAI39489.1| 446|Homo sapiens doublecortex; lissencep... 68 2e-11
AL450490-1|CAI39488.2| 362|Homo sapiens doublecortex; lissencep... 68 2e-11
AL031117-3|CAI43156.1| 446|Homo sapiens doublecortex; lissencep... 68 2e-11
AL031117-2|CAA19966.3| 362|Homo sapiens doublecortex; lissencep... 68 2e-11
AJ005592-1|CAA06617.1| 360|Homo sapiens doublecortin protein. 68 2e-11
AJ003112-1|CAA05867.1| 360|Homo sapiens doublecortin protein. 68 2e-11
AF040255-1|AAC31696.1| 360|Homo sapiens doublecortin protein. 68 2e-11
AF040254-1|AAC31797.1| 365|Homo sapiens doublecortin isoform pr... 68 2e-11
AF034634-1|AAC52037.1| 360|Homo sapiens doublecortin protein. 68 2e-11
AF152242-1|AAD46774.1| 2156|Homo sapiens retinitis pigmentosa 1 ... 63 5e-10
AF146592-1|AAD46769.1| 2156|Homo sapiens retinitis pigmentosa 1 ... 63 5e-10
AF143226-1|AAD44197.1| 2156|Homo sapiens retinitis pigmentosa RP... 63 5e-10
AF143222-1|AAD44198.1| 670|Homo sapiens retinitis pigmentosa RP... 63 5e-10
AF141021-1|AAD42072.1| 2156|Homo sapiens oxygen-regulated protei... 63 5e-10
AL390029-3|CAI15722.1| 363|Homo sapiens doublecortin and CaM ki... 61 2e-09
AL390029-2|CAI15721.1| 740|Homo sapiens doublecortin and CaM ki... 61 2e-09
AL390029-1|CAI15720.1| 729|Homo sapiens doublecortin and CaM ki... 61 2e-09
AL160392-3|CAH70263.1| 363|Homo sapiens doublecortin and CaM ki... 61 2e-09
AL160392-2|CAH70261.1| 740|Homo sapiens doublecortin and CaM ki... 61 2e-09
AL160392-1|CAH70262.1| 729|Homo sapiens doublecortin and CaM ki... 61 2e-09
AL157760-3|CAH70169.1| 363|Homo sapiens doublecortin and CaM ki... 61 2e-09
AL157760-2|CAH70168.1| 729|Homo sapiens doublecortin and CaM ki... 61 2e-09
AL157760-1|CAH70167.1| 740|Homo sapiens doublecortin and CaM ki... 61 2e-09
AL157694-3|CAH70658.1| 363|Homo sapiens doublecortin and CaM ki... 61 2e-09
AL157694-2|CAH70657.1| 729|Homo sapiens doublecortin and CaM ki... 61 2e-09
AL157694-1|CAH70656.1| 740|Homo sapiens doublecortin and CaM ki... 61 2e-09
AB002367-1|BAA20824.2| 794|Homo sapiens KIAA0369 protein. 61 2e-09
AL834498-1|CAD39156.1| 716|Homo sapiens hypothetical protein pr... 61 3e-09
AB209181-1|BAD92418.1| 796|Homo sapiens Hypothetical protein DK... 61 3e-09
AY168346-1|AAN86964.1| 2480|Homo sapiens retinitis pigmentosa 1-... 46 9e-05
AY168345-1|AAN86963.1| 2464|Homo sapiens retinitis pigmentosa 1-... 46 9e-05
AY168344-1|AAN86962.1| 2448|Homo sapiens retinitis pigmentosa 1-... 46 9e-05
AY168343-1|AAN86961.1| 2432|Homo sapiens retinitis pigmentosa 1-... 46 9e-05
AY168342-1|AAN86960.1| 2416|Homo sapiens retinitis pigmentosa 1-... 46 9e-05
AY168341-1|AAN86959.1| 2400|Homo sapiens retinitis pigmentosa 1-... 46 9e-05
AK127545-1|BAC87029.1| 222|Homo sapiens protein ( Homo sapiens ... 46 9e-05
AJ491324-1|CAD36957.1| 2464|Homo sapiens retinitis pigmentosa 1-... 46 9e-05
BC050704-1|AAH50704.1| 476|Homo sapiens DCDC2 protein protein. 43 8e-04
AL591344-2|CAH71789.1| 476|Homo sapiens doublecortin domain con... 42 0.001
AL359713-2|CAI17104.1| 476|Homo sapiens doublecortin domain con... 42 0.001
AL359389-1|CAH73546.1| 476|Homo sapiens doublecortin domain con... 42 0.001
AF181721-1|AAF23612.1| 476|Homo sapiens RU2S protein. 42 0.001
AF181720-2|AAF23610.1| 97|Homo sapiens RU2S protein. 42 0.001
AB032980-1|BAA86468.2| 476|Homo sapiens KIAA1154 protein protein. 42 0.001
BC128073-1|AAI28074.1| 349|Homo sapiens doublecortin domain con... 42 0.002
AY247970-1|AAP75563.1| 354|Homo sapiens putative doublecortin d... 29 8.0
>BC027925-1|AAH27925.1| 360|Homo sapiens doublecortex;
lissencephaly, X-linked (doublecortin) protein.
Length = 360
Score = 68.1 bits (159), Expect = 2e-11
Identities = 39/88 (44%), Positives = 53/88 (60%), Gaps = 6/88 (6%)
Query: 84 NYWKARRVTFYRNGDPFHPGVEFRFKPGRDLASIDALLD----RLSERLELPRGARFIFG 139
N KA++V FYRNGD + G+ + R S DALL LS+ + LP+G R+I+
Sbjct: 48 NEKKAKKVRFYRNGDRYFKGIVYAVSSDR-FRSFDALLADLTRSLSDNINLPQGVRYIYT 106
Query: 140 MDGDRKY-RLEELEDGASYVVSSYKTFK 166
+DG RK ++ELE+G SYV SS FK
Sbjct: 107 IDGSRKIGSMDELEEGESYVCSSDNFFK 134
>AL450490-2|CAI39489.1| 446|Homo sapiens doublecortex;
lissencephaly, X-linked (doublecortin) protein.
Length = 446
Score = 68.1 bits (159), Expect = 2e-11
Identities = 39/88 (44%), Positives = 53/88 (60%), Gaps = 6/88 (6%)
Query: 84 NYWKARRVTFYRNGDPFHPGVEFRFKPGRDLASIDALLD----RLSERLELPRGARFIFG 139
N KA++V FYRNGD + G+ + R S DALL LS+ + LP+G R+I+
Sbjct: 129 NEKKAKKVRFYRNGDRYFKGIVYAVSSDR-FRSFDALLADLTRSLSDNINLPQGVRYIYT 187
Query: 140 MDGDRKY-RLEELEDGASYVVSSYKTFK 166
+DG RK ++ELE+G SYV SS FK
Sbjct: 188 IDGSRKIGSMDELEEGESYVCSSDNFFK 215
>AL450490-1|CAI39488.2| 362|Homo sapiens doublecortex;
lissencephaly, X-linked (doublecortin) protein.
Length = 362
Score = 68.1 bits (159), Expect = 2e-11
Identities = 39/88 (44%), Positives = 53/88 (60%), Gaps = 6/88 (6%)
Query: 84 NYWKARRVTFYRNGDPFHPGVEFRFKPGRDLASIDALLD----RLSERLELPRGARFIFG 139
N KA++V FYRNGD + G+ + R S DALL LS+ + LP+G R+I+
Sbjct: 48 NEKKAKKVRFYRNGDRYFKGIVYAVSSDR-FRSFDALLADLTRSLSDNINLPQGVRYIYT 106
Query: 140 MDGDRKY-RLEELEDGASYVVSSYKTFK 166
+DG RK ++ELE+G SYV SS FK
Sbjct: 107 IDGSRKIGSMDELEEGESYVCSSDNFFK 134
>AL031117-3|CAI43156.1| 446|Homo sapiens doublecortex;
lissencephaly, X-linked (doublecortin) protein.
Length = 446
Score = 68.1 bits (159), Expect = 2e-11
Identities = 39/88 (44%), Positives = 53/88 (60%), Gaps = 6/88 (6%)
Query: 84 NYWKARRVTFYRNGDPFHPGVEFRFKPGRDLASIDALLD----RLSERLELPRGARFIFG 139
N KA++V FYRNGD + G+ + R S DALL LS+ + LP+G R+I+
Sbjct: 129 NEKKAKKVRFYRNGDRYFKGIVYAVSSDR-FRSFDALLADLTRSLSDNINLPQGVRYIYT 187
Query: 140 MDGDRKY-RLEELEDGASYVVSSYKTFK 166
+DG RK ++ELE+G SYV SS FK
Sbjct: 188 IDGSRKIGSMDELEEGESYVCSSDNFFK 215
>AL031117-2|CAA19966.3| 362|Homo sapiens doublecortex;
lissencephaly, X-linked (doublecortin) protein.
Length = 362
Score = 68.1 bits (159), Expect = 2e-11
Identities = 39/88 (44%), Positives = 53/88 (60%), Gaps = 6/88 (6%)
Query: 84 NYWKARRVTFYRNGDPFHPGVEFRFKPGRDLASIDALLD----RLSERLELPRGARFIFG 139
N KA++V FYRNGD + G+ + R S DALL LS+ + LP+G R+I+
Sbjct: 48 NEKKAKKVRFYRNGDRYFKGIVYAVSSDR-FRSFDALLADLTRSLSDNINLPQGVRYIYT 106
Query: 140 MDGDRKY-RLEELEDGASYVVSSYKTFK 166
+DG RK ++ELE+G SYV SS FK
Sbjct: 107 IDGSRKIGSMDELEEGESYVCSSDNFFK 134
>AJ005592-1|CAA06617.1| 360|Homo sapiens doublecortin protein.
Length = 360
Score = 68.1 bits (159), Expect = 2e-11
Identities = 39/88 (44%), Positives = 53/88 (60%), Gaps = 6/88 (6%)
Query: 84 NYWKARRVTFYRNGDPFHPGVEFRFKPGRDLASIDALLD----RLSERLELPRGARFIFG 139
N KA++V FYRNGD + G+ + R S DALL LS+ + LP+G R+I+
Sbjct: 48 NEKKAKKVRFYRNGDRYFKGIVYAVSSDR-FRSFDALLADLTRSLSDNINLPQGVRYIYT 106
Query: 140 MDGDRKY-RLEELEDGASYVVSSYKTFK 166
+DG RK ++ELE+G SYV SS FK
Sbjct: 107 IDGSRKIGSMDELEEGESYVCSSDNFFK 134
>AJ003112-1|CAA05867.1| 360|Homo sapiens doublecortin protein.
Length = 360
Score = 68.1 bits (159), Expect = 2e-11
Identities = 39/88 (44%), Positives = 53/88 (60%), Gaps = 6/88 (6%)
Query: 84 NYWKARRVTFYRNGDPFHPGVEFRFKPGRDLASIDALLD----RLSERLELPRGARFIFG 139
N KA++V FYRNGD + G+ + R S DALL LS+ + LP+G R+I+
Sbjct: 48 NEKKAKKVRFYRNGDRYFKGIVYAVSSDR-FRSFDALLADLTRSLSDNINLPQGVRYIYT 106
Query: 140 MDGDRKY-RLEELEDGASYVVSSYKTFK 166
+DG RK ++ELE+G SYV SS FK
Sbjct: 107 IDGSRKIGSMDELEEGESYVCSSDNFFK 134
>AF040255-1|AAC31696.1| 360|Homo sapiens doublecortin protein.
Length = 360
Score = 68.1 bits (159), Expect = 2e-11
Identities = 39/88 (44%), Positives = 53/88 (60%), Gaps = 6/88 (6%)
Query: 84 NYWKARRVTFYRNGDPFHPGVEFRFKPGRDLASIDALLD----RLSERLELPRGARFIFG 139
N KA++V FYRNGD + G+ + R S DALL LS+ + LP+G R+I+
Sbjct: 48 NEKKAKKVRFYRNGDRYFKGIVYAVSSDR-FRSFDALLADLTRSLSDNINLPQGVRYIYT 106
Query: 140 MDGDRKY-RLEELEDGASYVVSSYKTFK 166
+DG RK ++ELE+G SYV SS FK
Sbjct: 107 IDGSRKIGSMDELEEGESYVCSSDNFFK 134
>AF040254-1|AAC31797.1| 365|Homo sapiens doublecortin isoform
protein.
Length = 365
Score = 68.1 bits (159), Expect = 2e-11
Identities = 39/88 (44%), Positives = 53/88 (60%), Gaps = 6/88 (6%)
Query: 84 NYWKARRVTFYRNGDPFHPGVEFRFKPGRDLASIDALLD----RLSERLELPRGARFIFG 139
N KA++V FYRNGD + G+ + R S DALL LS+ + LP+G R+I+
Sbjct: 48 NEKKAKKVRFYRNGDRYFKGIVYAVSSDR-FRSFDALLADLTRSLSDNINLPQGVRYIYT 106
Query: 140 MDGDRKY-RLEELEDGASYVVSSYKTFK 166
+DG RK ++ELE+G SYV SS FK
Sbjct: 107 IDGSRKIGSMDELEEGESYVCSSDNFFK 134
>AF034634-1|AAC52037.1| 360|Homo sapiens doublecortin protein.
Length = 360
Score = 68.1 bits (159), Expect = 2e-11
Identities = 39/88 (44%), Positives = 53/88 (60%), Gaps = 6/88 (6%)
Query: 84 NYWKARRVTFYRNGDPFHPGVEFRFKPGRDLASIDALLD----RLSERLELPRGARFIFG 139
N KA++V FYRNGD + G+ + R S DALL LS+ + LP+G R+I+
Sbjct: 48 NEKKAKKVRFYRNGDRYFKGIVYAVSSDR-FRSFDALLADLTRSLSDNINLPQGVRYIYT 106
Query: 140 MDGDRKY-RLEELEDGASYVVSSYKTFK 166
+DG RK ++ELE+G SYV SS FK
Sbjct: 107 IDGSRKIGSMDELEEGESYVCSSDNFFK 134
>AF152242-1|AAD46774.1| 2156|Homo sapiens retinitis pigmentosa 1
protein protein.
Length = 2156
Score = 63.3 bits (147), Expect = 5e-10
Identities = 39/87 (44%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Query: 76 PASRYANLNY-WKARRVTFYRNGDPFHPGVEFRFKPGRDLASIDALLDRLSERLELPRGA 134
P R+ +L + A+R++FY++GDP GV P R S DALLD LS ++ LP G
Sbjct: 22 PPPRHLSLTHPVVAKRISFYKSGDPQFGGVRVVVNP-RSFKSFDALLDNLSRKVPLPFGV 80
Query: 135 RFIFGMDGDRKY-RLEELEDGASYVVS 160
R I G RLEELEDG SY+ S
Sbjct: 81 RNISTPRGRHSITRLEELEDGESYLCS 107
>AF146592-1|AAD46769.1| 2156|Homo sapiens retinitis pigmentosa 1
protein protein.
Length = 2156
Score = 63.3 bits (147), Expect = 5e-10
Identities = 39/87 (44%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Query: 76 PASRYANLNY-WKARRVTFYRNGDPFHPGVEFRFKPGRDLASIDALLDRLSERLELPRGA 134
P R+ +L + A+R++FY++GDP GV P R S DALLD LS ++ LP G
Sbjct: 22 PPPRHLSLTHPVVAKRISFYKSGDPQFGGVRVVVNP-RSFKSFDALLDNLSRKVPLPFGV 80
Query: 135 RFIFGMDGDRKY-RLEELEDGASYVVS 160
R I G RLEELEDG SY+ S
Sbjct: 81 RNISTPRGRHSITRLEELEDGESYLCS 107
>AF143226-1|AAD44197.1| 2156|Homo sapiens retinitis pigmentosa RP1
protein protein.
Length = 2156
Score = 63.3 bits (147), Expect = 5e-10
Identities = 39/87 (44%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Query: 76 PASRYANLNY-WKARRVTFYRNGDPFHPGVEFRFKPGRDLASIDALLDRLSERLELPRGA 134
P R+ +L + A+R++FY++GDP GV P R S DALLD LS ++ LP G
Sbjct: 22 PPPRHLSLTHPVVAKRISFYKSGDPQFGGVRVVVNP-RSFKSFDALLDNLSRKVPLPFGV 80
Query: 135 RFIFGMDGDRKY-RLEELEDGASYVVS 160
R I G RLEELEDG SY+ S
Sbjct: 81 RNISTPRGRHSITRLEELEDGESYLCS 107
>AF143222-1|AAD44198.1| 670|Homo sapiens retinitis pigmentosa RP1
protein protein.
Length = 670
Score = 63.3 bits (147), Expect = 5e-10
Identities = 39/87 (44%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Query: 76 PASRYANLNY-WKARRVTFYRNGDPFHPGVEFRFKPGRDLASIDALLDRLSERLELPRGA 134
P R+ +L + A+R++FY++GDP GV P R S DALLD LS ++ LP G
Sbjct: 22 PPPRHLSLTHPVVAKRISFYKSGDPQFGGVRVVVNP-RSFKSFDALLDNLSRKVPLPFGV 80
Query: 135 RFIFGMDGDRKY-RLEELEDGASYVVS 160
R I G RLEELEDG SY+ S
Sbjct: 81 RNISTPRGRHSITRLEELEDGESYLCS 107
>AF141021-1|AAD42072.1| 2156|Homo sapiens oxygen-regulated protein 1
protein.
Length = 2156
Score = 63.3 bits (147), Expect = 5e-10
Identities = 39/87 (44%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Query: 76 PASRYANLNY-WKARRVTFYRNGDPFHPGVEFRFKPGRDLASIDALLDRLSERLELPRGA 134
P R+ +L + A+R++FY++GDP GV P R S DALLD LS ++ LP G
Sbjct: 22 PPPRHLSLTHPVVAKRISFYKSGDPQFGGVRVVVNP-RSFKSFDALLDNLSRKVPLPFGV 80
Query: 135 RFIFGMDGDRKY-RLEELEDGASYVVS 160
R I G RLEELEDG SY+ S
Sbjct: 81 RNISTPRGRHSITRLEELEDGESYLCS 107
>AL390029-3|CAI15722.1| 363|Homo sapiens doublecortin and CaM
kinase-like 1 protein.
Length = 363
Score = 61.3 bits (142), Expect = 2e-09
Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 6/85 (7%)
Query: 87 KARRVTFYRNGDPFHPGVEFRFKPGRDLASIDALL----DRLSERLELPRGARFIFGMDG 142
KA++V FYRNGD + G+ + P R S +ALL LS+ + LP+G R I+ +DG
Sbjct: 55 KAKKVRFYRNGDRYFKGIVYAISPDR-FRSFEALLADLTRTLSDNVNLPQGVRTIYTIDG 113
Query: 143 DRKY-RLEELEDGASYVVSSYKTFK 166
+K L++L +G SYV S + FK
Sbjct: 114 LKKISSLDQLVEGESYVCGSIEPFK 138
>AL390029-2|CAI15721.1| 740|Homo sapiens doublecortin and CaM
kinase-like 1 protein.
Length = 740
Score = 61.3 bits (142), Expect = 2e-09
Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 6/85 (7%)
Query: 87 KARRVTFYRNGDPFHPGVEFRFKPGRDLASIDALL----DRLSERLELPRGARFIFGMDG 142
KA++V FYRNGD + G+ + P R S +ALL LS+ + LP+G R I+ +DG
Sbjct: 55 KAKKVRFYRNGDRYFKGIVYAISPDR-FRSFEALLADLTRTLSDNVNLPQGVRTIYTIDG 113
Query: 143 DRKY-RLEELEDGASYVVSSYKTFK 166
+K L++L +G SYV S + FK
Sbjct: 114 LKKISSLDQLVEGESYVCGSIEPFK 138
>AL390029-1|CAI15720.1| 729|Homo sapiens doublecortin and CaM
kinase-like 1 protein.
Length = 729
Score = 61.3 bits (142), Expect = 2e-09
Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 6/85 (7%)
Query: 87 KARRVTFYRNGDPFHPGVEFRFKPGRDLASIDALL----DRLSERLELPRGARFIFGMDG 142
KA++V FYRNGD + G+ + P R S +ALL LS+ + LP+G R I+ +DG
Sbjct: 55 KAKKVRFYRNGDRYFKGIVYAISPDR-FRSFEALLADLTRTLSDNVNLPQGVRTIYTIDG 113
Query: 143 DRKY-RLEELEDGASYVVSSYKTFK 166
+K L++L +G SYV S + FK
Sbjct: 114 LKKISSLDQLVEGESYVCGSIEPFK 138
>AL160392-3|CAH70263.1| 363|Homo sapiens doublecortin and CaM
kinase-like 1 protein.
Length = 363
Score = 61.3 bits (142), Expect = 2e-09
Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 6/85 (7%)
Query: 87 KARRVTFYRNGDPFHPGVEFRFKPGRDLASIDALL----DRLSERLELPRGARFIFGMDG 142
KA++V FYRNGD + G+ + P R S +ALL LS+ + LP+G R I+ +DG
Sbjct: 55 KAKKVRFYRNGDRYFKGIVYAISPDR-FRSFEALLADLTRTLSDNVNLPQGVRTIYTIDG 113
Query: 143 DRKY-RLEELEDGASYVVSSYKTFK 166
+K L++L +G SYV S + FK
Sbjct: 114 LKKISSLDQLVEGESYVCGSIEPFK 138
>AL160392-2|CAH70261.1| 740|Homo sapiens doublecortin and CaM
kinase-like 1 protein.
Length = 740
Score = 61.3 bits (142), Expect = 2e-09
Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 6/85 (7%)
Query: 87 KARRVTFYRNGDPFHPGVEFRFKPGRDLASIDALL----DRLSERLELPRGARFIFGMDG 142
KA++V FYRNGD + G+ + P R S +ALL LS+ + LP+G R I+ +DG
Sbjct: 55 KAKKVRFYRNGDRYFKGIVYAISPDR-FRSFEALLADLTRTLSDNVNLPQGVRTIYTIDG 113
Query: 143 DRKY-RLEELEDGASYVVSSYKTFK 166
+K L++L +G SYV S + FK
Sbjct: 114 LKKISSLDQLVEGESYVCGSIEPFK 138
>AL160392-1|CAH70262.1| 729|Homo sapiens doublecortin and CaM
kinase-like 1 protein.
Length = 729
Score = 61.3 bits (142), Expect = 2e-09
Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 6/85 (7%)
Query: 87 KARRVTFYRNGDPFHPGVEFRFKPGRDLASIDALL----DRLSERLELPRGARFIFGMDG 142
KA++V FYRNGD + G+ + P R S +ALL LS+ + LP+G R I+ +DG
Sbjct: 55 KAKKVRFYRNGDRYFKGIVYAISPDR-FRSFEALLADLTRTLSDNVNLPQGVRTIYTIDG 113
Query: 143 DRKY-RLEELEDGASYVVSSYKTFK 166
+K L++L +G SYV S + FK
Sbjct: 114 LKKISSLDQLVEGESYVCGSIEPFK 138
>AL157760-3|CAH70169.1| 363|Homo sapiens doublecortin and CaM
kinase-like 1 protein.
Length = 363
Score = 61.3 bits (142), Expect = 2e-09
Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 6/85 (7%)
Query: 87 KARRVTFYRNGDPFHPGVEFRFKPGRDLASIDALL----DRLSERLELPRGARFIFGMDG 142
KA++V FYRNGD + G+ + P R S +ALL LS+ + LP+G R I+ +DG
Sbjct: 55 KAKKVRFYRNGDRYFKGIVYAISPDR-FRSFEALLADLTRTLSDNVNLPQGVRTIYTIDG 113
Query: 143 DRKY-RLEELEDGASYVVSSYKTFK 166
+K L++L +G SYV S + FK
Sbjct: 114 LKKISSLDQLVEGESYVCGSIEPFK 138
>AL157760-2|CAH70168.1| 729|Homo sapiens doublecortin and CaM
kinase-like 1 protein.
Length = 729
Score = 61.3 bits (142), Expect = 2e-09
Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 6/85 (7%)
Query: 87 KARRVTFYRNGDPFHPGVEFRFKPGRDLASIDALL----DRLSERLELPRGARFIFGMDG 142
KA++V FYRNGD + G+ + P R S +ALL LS+ + LP+G R I+ +DG
Sbjct: 55 KAKKVRFYRNGDRYFKGIVYAISPDR-FRSFEALLADLTRTLSDNVNLPQGVRTIYTIDG 113
Query: 143 DRKY-RLEELEDGASYVVSSYKTFK 166
+K L++L +G SYV S + FK
Sbjct: 114 LKKISSLDQLVEGESYVCGSIEPFK 138
>AL157760-1|CAH70167.1| 740|Homo sapiens doublecortin and CaM
kinase-like 1 protein.
Length = 740
Score = 61.3 bits (142), Expect = 2e-09
Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 6/85 (7%)
Query: 87 KARRVTFYRNGDPFHPGVEFRFKPGRDLASIDALL----DRLSERLELPRGARFIFGMDG 142
KA++V FYRNGD + G+ + P R S +ALL LS+ + LP+G R I+ +DG
Sbjct: 55 KAKKVRFYRNGDRYFKGIVYAISPDR-FRSFEALLADLTRTLSDNVNLPQGVRTIYTIDG 113
Query: 143 DRKY-RLEELEDGASYVVSSYKTFK 166
+K L++L +G SYV S + FK
Sbjct: 114 LKKISSLDQLVEGESYVCGSIEPFK 138
>AL157694-3|CAH70658.1| 363|Homo sapiens doublecortin and CaM
kinase-like 1 protein.
Length = 363
Score = 61.3 bits (142), Expect = 2e-09
Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 6/85 (7%)
Query: 87 KARRVTFYRNGDPFHPGVEFRFKPGRDLASIDALL----DRLSERLELPRGARFIFGMDG 142
KA++V FYRNGD + G+ + P R S +ALL LS+ + LP+G R I+ +DG
Sbjct: 55 KAKKVRFYRNGDRYFKGIVYAISPDR-FRSFEALLADLTRTLSDNVNLPQGVRTIYTIDG 113
Query: 143 DRKY-RLEELEDGASYVVSSYKTFK 166
+K L++L +G SYV S + FK
Sbjct: 114 LKKISSLDQLVEGESYVCGSIEPFK 138
>AL157694-2|CAH70657.1| 729|Homo sapiens doublecortin and CaM
kinase-like 1 protein.
Length = 729
Score = 61.3 bits (142), Expect = 2e-09
Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 6/85 (7%)
Query: 87 KARRVTFYRNGDPFHPGVEFRFKPGRDLASIDALL----DRLSERLELPRGARFIFGMDG 142
KA++V FYRNGD + G+ + P R S +ALL LS+ + LP+G R I+ +DG
Sbjct: 55 KAKKVRFYRNGDRYFKGIVYAISPDR-FRSFEALLADLTRTLSDNVNLPQGVRTIYTIDG 113
Query: 143 DRKY-RLEELEDGASYVVSSYKTFK 166
+K L++L +G SYV S + FK
Sbjct: 114 LKKISSLDQLVEGESYVCGSIEPFK 138
>AL157694-1|CAH70656.1| 740|Homo sapiens doublecortin and CaM
kinase-like 1 protein.
Length = 740
Score = 61.3 bits (142), Expect = 2e-09
Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 6/85 (7%)
Query: 87 KARRVTFYRNGDPFHPGVEFRFKPGRDLASIDALL----DRLSERLELPRGARFIFGMDG 142
KA++V FYRNGD + G+ + P R S +ALL LS+ + LP+G R I+ +DG
Sbjct: 55 KAKKVRFYRNGDRYFKGIVYAISPDR-FRSFEALLADLTRTLSDNVNLPQGVRTIYTIDG 113
Query: 143 DRKY-RLEELEDGASYVVSSYKTFK 166
+K L++L +G SYV S + FK
Sbjct: 114 LKKISSLDQLVEGESYVCGSIEPFK 138
>AB002367-1|BAA20824.2| 794|Homo sapiens KIAA0369 protein.
Length = 794
Score = 61.3 bits (142), Expect = 2e-09
Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 6/85 (7%)
Query: 87 KARRVTFYRNGDPFHPGVEFRFKPGRDLASIDALL----DRLSERLELPRGARFIFGMDG 142
KA++V FYRNGD + G+ + P R S +ALL LS+ + LP+G R I+ +DG
Sbjct: 120 KAKKVRFYRNGDRYFKGIVYAISPDR-FRSFEALLADLTRTLSDNVNLPQGVRTIYTIDG 178
Query: 143 DRKY-RLEELEDGASYVVSSYKTFK 166
+K L++L +G SYV S + FK
Sbjct: 179 LKKISSLDQLVEGESYVCGSIEPFK 203
>AL834498-1|CAD39156.1| 716|Homo sapiens hypothetical protein
protein.
Length = 716
Score = 60.9 bits (141), Expect = 3e-09
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 6/85 (7%)
Query: 87 KARRVTFYRNGDPFHPGVEFRFKPGRDLASIDALL----DRLSERLELPRGARFIFGMDG 142
KA++ FYRNGD + G+ F R S DALL LS+ + LP+G R I+ +DG
Sbjct: 3 KAKKARFYRNGDRYFKGLVFAISSDR-FRSFDALLIELTRSLSDNVNLPQGVRTIYTIDG 61
Query: 143 DRKY-RLEELEDGASYVVSSYKTFK 166
RK L+EL +G SYV +S + F+
Sbjct: 62 SRKVTSLDELLEGESYVCASNEPFR 86
>AB209181-1|BAD92418.1| 796|Homo sapiens Hypothetical protein
DKFZp761I032 variant protein.
Length = 796
Score = 60.9 bits (141), Expect = 3e-09
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 6/85 (7%)
Query: 87 KARRVTFYRNGDPFHPGVEFRFKPGRDLASIDALL----DRLSERLELPRGARFIFGMDG 142
KA++ FYRNGD + G+ F R S DALL LS+ + LP+G R I+ +DG
Sbjct: 100 KAKKARFYRNGDRYFKGLVFAISSDR-FRSFDALLIELTRSLSDNVNLPQGVRTIYTIDG 158
Query: 143 DRKY-RLEELEDGASYVVSSYKTFK 166
RK L+EL +G SYV +S + F+
Sbjct: 159 SRKVTSLDELLEGESYVCASNEPFR 183
>AY168346-1|AAN86964.1| 2480|Homo sapiens retinitis pigmentosa
1-like 1 protein protein.
Length = 2480
Score = 46.0 bits (104), Expect = 9e-05
Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 88 ARRVTFYRNGDPFHPGVEFRFKPGRDLASIDALLDRLSERLELPRGARFIFGMDGDRKY- 146
A+++TF + GDP GV R + AL+D LS+R+ L G R + G
Sbjct: 33 AKKITFLKRGDPRFAGVRLAVHQ-RAFKTFSALMDELSQRVPLSFGVRSVTTPRGLHSLS 91
Query: 147 RLEELEDGASYVVSSYK 163
LE+LEDG Y+ S K
Sbjct: 92 ALEQLEDGGCYLCSDKK 108
>AY168345-1|AAN86963.1| 2464|Homo sapiens retinitis pigmentosa
1-like 1 protein protein.
Length = 2464
Score = 46.0 bits (104), Expect = 9e-05
Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 88 ARRVTFYRNGDPFHPGVEFRFKPGRDLASIDALLDRLSERLELPRGARFIFGMDGDRKY- 146
A+++TF + GDP GV R + AL+D LS+R+ L G R + G
Sbjct: 33 AKKITFLKRGDPRFAGVRLAVHQ-RAFKTFSALMDELSQRVPLSFGVRSVTTPRGLHSLS 91
Query: 147 RLEELEDGASYVVSSYK 163
LE+LEDG Y+ S K
Sbjct: 92 ALEQLEDGGCYLCSDKK 108
>AY168344-1|AAN86962.1| 2448|Homo sapiens retinitis pigmentosa
1-like 1 protein protein.
Length = 2448
Score = 46.0 bits (104), Expect = 9e-05
Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 88 ARRVTFYRNGDPFHPGVEFRFKPGRDLASIDALLDRLSERLELPRGARFIFGMDGDRKY- 146
A+++TF + GDP GV R + AL+D LS+R+ L G R + G
Sbjct: 33 AKKITFLKRGDPRFAGVRLAVHQ-RAFKTFSALMDELSQRVPLSFGVRSVTTPRGLHSLS 91
Query: 147 RLEELEDGASYVVSSYK 163
LE+LEDG Y+ S K
Sbjct: 92 ALEQLEDGGCYLCSDKK 108
>AY168343-1|AAN86961.1| 2432|Homo sapiens retinitis pigmentosa
1-like 1 protein protein.
Length = 2432
Score = 46.0 bits (104), Expect = 9e-05
Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 88 ARRVTFYRNGDPFHPGVEFRFKPGRDLASIDALLDRLSERLELPRGARFIFGMDGDRKY- 146
A+++TF + GDP GV R + AL+D LS+R+ L G R + G
Sbjct: 33 AKKITFLKRGDPRFAGVRLAVHQ-RAFKTFSALMDELSQRVPLSFGVRSVTTPRGLHSLS 91
Query: 147 RLEELEDGASYVVSSYK 163
LE+LEDG Y+ S K
Sbjct: 92 ALEQLEDGGCYLCSDKK 108
>AY168342-1|AAN86960.1| 2416|Homo sapiens retinitis pigmentosa
1-like 1 protein protein.
Length = 2416
Score = 46.0 bits (104), Expect = 9e-05
Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 88 ARRVTFYRNGDPFHPGVEFRFKPGRDLASIDALLDRLSERLELPRGARFIFGMDGDRKY- 146
A+++TF + GDP GV R + AL+D LS+R+ L G R + G
Sbjct: 33 AKKITFLKRGDPRFAGVRLAVHQ-RAFKTFSALMDELSQRVPLSFGVRSVTTPRGLHSLS 91
Query: 147 RLEELEDGASYVVSSYK 163
LE+LEDG Y+ S K
Sbjct: 92 ALEQLEDGGCYLCSDKK 108
>AY168341-1|AAN86959.1| 2400|Homo sapiens retinitis pigmentosa
1-like 1 protein protein.
Length = 2400
Score = 46.0 bits (104), Expect = 9e-05
Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 88 ARRVTFYRNGDPFHPGVEFRFKPGRDLASIDALLDRLSERLELPRGARFIFGMDGDRKY- 146
A+++TF + GDP GV R + AL+D LS+R+ L G R + G
Sbjct: 33 AKKITFLKRGDPRFAGVRLAVHQ-RAFKTFSALMDELSQRVPLSFGVRSVTTPRGLHSLS 91
Query: 147 RLEELEDGASYVVSSYK 163
LE+LEDG Y+ S K
Sbjct: 92 ALEQLEDGGCYLCSDKK 108
>AK127545-1|BAC87029.1| 222|Homo sapiens protein ( Homo sapiens
cDNA FLJ45638 fis, clone COLON2004911, weakly similar
to Oxygen-regulated protein 1. ).
Length = 222
Score = 46.0 bits (104), Expect = 9e-05
Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 88 ARRVTFYRNGDPFHPGVEFRFKPGRDLASIDALLDRLSERLELPRGARFIFGMDGDRKY- 146
A+++TF + GDP GV R + AL+D LS+R+ L G R + G
Sbjct: 33 AKKITFLKRGDPRFAGVRLAVHQ-RAFKTFSALMDELSQRVPLSFGVRSVTTPRGLHSLS 91
Query: 147 RLEELEDGASYVVSSYK 163
LE+LEDG Y+ S K
Sbjct: 92 ALEQLEDGGCYLCSDKK 108
>AJ491324-1|CAD36957.1| 2464|Homo sapiens retinitis pigmentosa
1-like protein 1 protein.
Length = 2464
Score = 46.0 bits (104), Expect = 9e-05
Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 88 ARRVTFYRNGDPFHPGVEFRFKPGRDLASIDALLDRLSERLELPRGARFIFGMDGDRKY- 146
A+++TF + GDP GV R + AL+D LS+R+ L G R + G
Sbjct: 33 AKKITFLKRGDPRFAGVRLAVHQ-RAFKTFSALMDELSQRVPLSFGVRSVTTPRGLHSLS 91
Query: 147 RLEELEDGASYVVSSYK 163
LE+LEDG Y+ S K
Sbjct: 92 ALEQLEDGGCYLCSDKK 108
>BC050704-1|AAH50704.1| 476|Homo sapiens DCDC2 protein protein.
Length = 476
Score = 42.7 bits (96), Expect = 8e-04
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 77 ASRYANLNYWKARRVTFYRNGDPFHPGVEFRFKPGRDLASIDALLDRLSERLELPRGA-R 135
++R ++L+ + V YRNGDPF+ G + ++S + L ++ ++ P GA R
Sbjct: 5 SARSSHLSQPVVKSVLVYRNGDPFYAGRRVVIHE-KKVSSFEVFLKEVTGGVQAPFGAVR 63
Query: 136 FIFGMDGDRKYR-LEELEDGASYVVSSYKTFK 166
I+ D + R L++++ G +YV + FK
Sbjct: 64 NIYTPRTDHRIRKLDQIQSGGNYVAGGQEAFK 95
>AL591344-2|CAH71789.1| 476|Homo sapiens doublecortin domain
containing 2 protein.
Length = 476
Score = 42.3 bits (95), Expect = 0.001
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 77 ASRYANLNYWKARRVTFYRNGDPFHPGVEFRFKPGRDLASIDALLDRLSERLELPRGA-R 135
++R ++L+ + V YRNGDPF+ G + ++S + L ++ ++ P GA R
Sbjct: 5 SARSSHLSQPVVKSVLVYRNGDPFYAGRRVVIHE-KKVSSFEVFLKEVTGGVQAPFGAVR 63
Query: 136 FIF-GMDGDRKYRLEELEDGASYVVSSYKTFK 166
I+ G R +L++++ G +YV + FK
Sbjct: 64 NIYTPRTGHRIRKLDQIQSGGNYVAGGQEAFK 95
>AL359713-2|CAI17104.1| 476|Homo sapiens doublecortin domain
containing 2 protein.
Length = 476
Score = 42.3 bits (95), Expect = 0.001
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 77 ASRYANLNYWKARRVTFYRNGDPFHPGVEFRFKPGRDLASIDALLDRLSERLELPRGA-R 135
++R ++L+ + V YRNGDPF+ G + ++S + L ++ ++ P GA R
Sbjct: 5 SARSSHLSQPVVKSVLVYRNGDPFYAGRRVVIHE-KKVSSFEVFLKEVTGGVQAPFGAVR 63
Query: 136 FIF-GMDGDRKYRLEELEDGASYVVSSYKTFK 166
I+ G R +L++++ G +YV + FK
Sbjct: 64 NIYTPRTGHRIRKLDQIQSGGNYVAGGQEAFK 95
>AL359389-1|CAH73546.1| 476|Homo sapiens doublecortin domain
containing 2 protein.
Length = 476
Score = 42.3 bits (95), Expect = 0.001
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 77 ASRYANLNYWKARRVTFYRNGDPFHPGVEFRFKPGRDLASIDALLDRLSERLELPRGA-R 135
++R ++L+ + V YRNGDPF+ G + ++S + L ++ ++ P GA R
Sbjct: 5 SARSSHLSQPVVKSVLVYRNGDPFYAGRRVVIHE-KKVSSFEVFLKEVTGGVQAPFGAVR 63
Query: 136 FIF-GMDGDRKYRLEELEDGASYVVSSYKTFK 166
I+ G R +L++++ G +YV + FK
Sbjct: 64 NIYTPRTGHRIRKLDQIQSGGNYVAGGQEAFK 95
>AF181721-1|AAF23612.1| 476|Homo sapiens RU2S protein.
Length = 476
Score = 42.3 bits (95), Expect = 0.001
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 77 ASRYANLNYWKARRVTFYRNGDPFHPGVEFRFKPGRDLASIDALLDRLSERLELPRGA-R 135
++R ++L+ + V YRNGDPF+ G + ++S + L ++ ++ P GA R
Sbjct: 5 SARSSHLSQPVVKSVLVYRNGDPFYAGRRVVIHE-KKVSSFEVFLKEVTGGVQAPFGAVR 63
Query: 136 FIF-GMDGDRKYRLEELEDGASYVVSSYKTFK 166
I+ G R +L++++ G +YV + FK
Sbjct: 64 NIYTPRTGHRIRKLDQIQSGGNYVAGGQEAFK 95
>AF181720-2|AAF23610.1| 97|Homo sapiens RU2S protein.
Length = 97
Score = 42.3 bits (95), Expect = 0.001
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 77 ASRYANLNYWKARRVTFYRNGDPFHPGVEFRFKPGRDLASIDALLDRLSERLELPRGA-R 135
++R ++L+ + V YRNGDPF+ G + ++S + L ++ ++ P GA R
Sbjct: 5 SARSSHLSQPVVKSVLVYRNGDPFYAGRRVVIHE-KKVSSFEVFLKEVTGGVQAPFGAVR 63
Query: 136 FIF-GMDGDRKYRLEELEDGASYVVSSYKTFK 166
I+ G R +L++++ G +YV + FK
Sbjct: 64 NIYTPRTGHRIRKLDQIQSGGNYVAGGQEAFK 95
>AB032980-1|BAA86468.2| 476|Homo sapiens KIAA1154 protein protein.
Length = 476
Score = 42.3 bits (95), Expect = 0.001
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 77 ASRYANLNYWKARRVTFYRNGDPFHPGVEFRFKPGRDLASIDALLDRLSERLELPRGA-R 135
++R ++L+ + V YRNGDPF+ G + ++S + L ++ ++ P GA R
Sbjct: 5 SARSSHLSQPVVKSVLVYRNGDPFYAGRRVVIHE-KKVSSFEVFLKEVTGGVQAPFGAVR 63
Query: 136 FIF-GMDGDRKYRLEELEDGASYVVSSYKTFK 166
I+ G R +L++++ G +YV + FK
Sbjct: 64 NIYTPRTGHRIRKLDQIQSGGNYVAGGQEAFK 95
>BC128073-1|AAI28074.1| 349|Homo sapiens doublecortin domain
containing 2B protein.
Length = 349
Score = 41.5 bits (93), Expect = 0.002
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 88 ARRVTFYRNGDPFHPGVEFRFKPGRDLASIDALLDRLSERLELPRGARFIF-GMDGDRKY 146
A+RV YRNGDPF PG + R +++A L ++ ++ P R ++ G
Sbjct: 8 AKRVVVYRNGDPFFPGSQL-VVTQRRFPTMEAFLCEVTSAVQAPLAVRALYTPCHGHPVT 66
Query: 147 RLEELEDGASYVVSSYKTF 165
L +L++ YV + ++ F
Sbjct: 67 NLADLKNRGQYVAAGFERF 85
>AY247970-1|AAP75563.1| 354|Homo sapiens putative doublecortin
domain-containing protein protein.
Length = 354
Score = 29.5 bits (63), Expect = 8.0
Identities = 16/57 (28%), Positives = 28/57 (49%)
Query: 116 SIDALLDRLSERLELPRGARFIFGMDGDRKYRLEELEDGASYVVSSYKTFKYSYRSV 172
+I LL+ +E+L L AR +F DG E++ A VS+ + F ++ +
Sbjct: 194 TITLLLEECTEKLNLNMAARRVFLADGKEALEPEDIPHEADVYVSTGEPFLNPFKKI 250
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.324 0.141 0.433
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,105,576
Number of Sequences: 224733
Number of extensions: 871883
Number of successful extensions: 1427
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 1332
Number of HSP's gapped (non-prelim): 47
length of query: 196
length of database: 73,234,838
effective HSP length: 86
effective length of query: 110
effective length of database: 53,907,800
effective search space: 5929858000
effective search space used: 5929858000
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 63 (29.5 bits)
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