Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002783-TA|BGIBMGA002783-PA|IPR001678|Bacterial Fmu
(Sun)/eukaryotic nucleolar NOL1/Nop2p
(663 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132949-4|CAB70101.2| 439|Caenorhabditis elegans Hypothetical ... 155 9e-38
AL132949-38|CAB70100.3| 285|Caenorhabditis elegans Hypothetical... 138 1e-32
AF106576-1|AAC78177.2| 664|Caenorhabditis elegans Hypothetical ... 64 4e-10
AC025721-9|AAK29904.3| 639|Caenorhabditis elegans Hypothetical ... 61 3e-09
AC025716-7|AAK95888.1| 465|Caenorhabditis elegans Hypothetical ... 54 3e-07
AF039041-7|AAB94189.2| 448|Caenorhabditis elegans Hypothetical ... 33 0.85
L14429-1|AAA28219.2| 575|Caenorhabditis elegans Hypothetical pr... 32 1.1
AF036705-7|AAB95174.1| 324|Caenorhabditis elegans Hypothetical ... 32 1.1
U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily ass... 32 1.5
Z75533-2|CAA99816.1| 245|Caenorhabditis elegans Hypothetical pr... 31 2.0
U41550-1|AAA83284.1| 1057|Caenorhabditis elegans Hypothetical pr... 31 2.6
U53332-1|AAK31529.1| 353|Caenorhabditis elegans Hypothetical pr... 31 3.4
DQ178637-1|ABD75716.1| 580|Caenorhabditis elegans F59G1.4 protein. 31 3.4
AL132862-19|CAB70231.2| 640|Caenorhabditis elegans Hypothetical... 31 3.4
Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical p... 30 6.0
U88184-11|AAM98019.1| 123|Caenorhabditis elegans Hypothetical p... 30 6.0
AL034393-5|CAA22311.1| 362|Caenorhabditis elegans Hypothetical ... 30 6.0
AF159950-1|AAD45354.1| 362|Caenorhabditis elegans GSK-3 protein. 30 6.0
Z92847-3|CAB07422.2| 323|Caenorhabditis elegans Hypothetical pr... 29 7.9
Z81589-5|CAB04722.1| 233|Caenorhabditis elegans Hypothetical pr... 29 7.9
Z81589-4|CAB04721.1| 256|Caenorhabditis elegans Hypothetical pr... 29 7.9
AL033514-23|CAA22106.3| 1353|Caenorhabditis elegans Hypothetical... 29 7.9
AL032618-4|CAB63367.1| 353|Caenorhabditis elegans Hypothetical ... 29 7.9
AF183401-1|AAF13189.1| 1353|Caenorhabditis elegans TIM-1 protein. 29 7.9
>AL132949-4|CAB70101.2| 439|Caenorhabditis elegans Hypothetical
protein Y53F4B.4b protein.
Length = 439
Score = 155 bits (376), Expect = 9e-38
Identities = 125/456 (27%), Positives = 211/456 (46%), Gaps = 50/456 (10%)
Query: 12 YKIAANILKKVSTEGGSVKTLLYDDKLRHFRTNVLFALITETIKHSDVITKIFESCDI-- 69
Y A I++ V + SV+ +Y ++ + L L E++K V +I + ++
Sbjct: 7 YNEVAEIIRCVLAKEKSVRNAVYGSSYKNKKA--LLRLSCESLKFRPVFDEILQDKELKS 64
Query: 70 LQNETRL--DPWLAKILTAELLYGKKVLPGKSKPEQTISSYKENFEKYLSEHQD------ 121
++ + + L +L E L G + + + IS + ++ QD
Sbjct: 65 MKRDANIGGSVELLYVLMYETLVGSGLTRCSQELKSVISRRIQRIKEVEHAMQDEGRGIK 124
Query: 122 -----DSQIQDVPKPRYVRINTNLLTTSDAIRAFQDEGYHFVRCTSGSYEDYLKQIQNLS 176
D ++ + PRY RINT T +A++ + E + + E++ + + +
Sbjct: 125 AMKEADDGMKKIQIPRYARINTLKWTADEAMKTLETEKWKILGTLKP--ENFAEMVTKMK 182
Query: 177 EDDFTQDYHVKTIFVFPPGTK-LHDHELYFESKIILQNKATAMAVHLLAPPSGSIVLDMC 235
+D+ D HV+ + +F P + +++ + + +ILQ+KA+ + LL P GS V D C
Sbjct: 183 DDEVYVDPHVENLIIFAPNIQNFYEYWMVEQRYLILQDKASCLPAFLLNPRPGSQVFDTC 242
Query: 236 AAPGMKTTQTAAYMRNNVGSNSDKRLFSKGHPRNLIDMGKIYAIERNEKRFETLRDFVNK 295
AAPGMKT+ AA M N GK++A++R R T++ ++
Sbjct: 243 AAPGMKTSHAAAIMENQ---------------------GKVWAMDRAADRVATMKQLLDA 281
Query: 296 TGSHCVEPIHRDCL--EIKKGEFDDVEYILLDPSCSGSG----MDISVHNYIEESRLAKL 349
+ D L ++ +F V++ ++DP CSGSG MD E+ RL KL
Sbjct: 282 SKVAIASSFCGDFLKTDVTDKKFSKVKFAIVDPPCSGSGIVKRMDEITGGNAEKERLEKL 341
Query: 350 TSLQEKFLKHAMNAFPRAKRIVYSTCSLFPEENERVITNVVKTSRTKWRVQDVKELLKGQ 409
+LQ LKHA+ P KR VYSTCS+ EENE+V+ V+ + + K +L +
Sbjct: 342 KNLQAMILKHALK-LPGLKRAVYSTCSVHEEENEQVVDEVLLDTYVRQNYVLKKNVLP-E 399
Query: 410 WKNFGSAMYGSMGTRCMYARQDSDLTTGFFLAVLDR 445
W G Y +G C+ A LT GFF+AV +R
Sbjct: 400 WTYRGLKTY-EVGEHCLRANPKVTLTNGFFVAVFER 434
>AL132949-38|CAB70100.3| 285|Caenorhabditis elegans Hypothetical
protein Y53F4B.4a protein.
Length = 285
Score = 138 bits (334), Expect = 1e-32
Identities = 92/287 (32%), Positives = 144/287 (50%), Gaps = 31/287 (10%)
Query: 166 EDYLKQIQNLSEDDFTQDYHVKTIFVFPPGTK-LHDHELYFESKIILQNKATAMAVHLLA 224
E++ + + + +D+ D HV+ + +F P + +++ + + +ILQ+KA+ + LL
Sbjct: 18 ENFAEMVTKMKDDEVYVDPHVENLIIFAPNIQNFYEYWMVEQRYLILQDKASCLPAFLLN 77
Query: 225 PPSGSIVLDMCAAPGMKTTQTAAYMRNNVGSNSDKRLFSKGHPRNLIDMGKIYAIERNEK 284
P GS V D CAAPGMKT+ AA M N GK++A++R
Sbjct: 78 PRPGSQVFDTCAAPGMKTSHAAAIMENQ---------------------GKVWAMDRAAD 116
Query: 285 RFETLRDFVNKTGSHCVEPIHRDCL--EIKKGEFDDVEYILLDPSCSGSG----MDISVH 338
R T++ ++ + D L ++ +F V++ ++DP CSGSG MD
Sbjct: 117 RVATMKQLLDASKVAIASSFCGDFLKTDVTDKKFSKVKFAIVDPPCSGSGIVKRMDEITG 176
Query: 339 NYIEESRLAKLTSLQEKFLKHAMNAFPRAKRIVYSTCSLFPEENERVITNVVKTSRTKWR 398
E+ RL KL +LQ LKHA+ P KR VYSTCS+ EENE+V+ V+ + +
Sbjct: 177 GNAEKERLEKLKNLQAMILKHALK-LPGLKRAVYSTCSVHEEENEQVVDEVLLDTYVRQN 235
Query: 399 VQDVKELLKGQWKNFGSAMYGSMGTRCMYARQDSDLTTGFFLAVLDR 445
K +L +W G Y +G C+ A LT GFF+AV +R
Sbjct: 236 YVLKKNVLP-EWTYRGLKTY-EVGEHCLRANPKVTLTNGFFVAVFER 280
>AF106576-1|AAC78177.2| 664|Caenorhabditis elegans Hypothetical
protein W07E6.1 protein.
Length = 664
Score = 63.7 bits (148), Expect = 4e-10
Identities = 70/317 (22%), Positives = 132/317 (41%), Gaps = 36/317 (11%)
Query: 204 YFESKIILQNKATAMAVHLLAPPSGSIVLDMCAAPGMKTTQTAAYMRNNVGSNSDKRLFS 263
Y ++Q + + V LAP G VLDMC+APG KT+ AA M+N+
Sbjct: 282 YLAGHYMIQGLNSLLPVMALAPQPGDRVLDMCSAPGGKTSHIAALMKNS----------- 330
Query: 264 KGHPRNLIDMGKIYAIERNEKRFETLRDFVNKTGSHCVEPIHRDCLEIKKGEFDDVEYIL 323
G ++A + N R + +++ G + + E K + + IL
Sbjct: 331 ----------GVLFANDANFTRCRAIIGNLHRLGVNNTVVCNLGGEEFSKIRPNGFDRIL 380
Query: 324 LDPSCSGSGM---DISVHNYIEESRLAKLTSLQEKFLKHAMNAF----PRAKRIVYSTCS 376
LD CSG+G+ D SV + + + ++Q + + A+++ P +VYSTCS
Sbjct: 381 LDAPCSGTGVIWKDQSVKTSKDSQDVQRRHTMQRQLILSALDSLDANSPNGGYLVYSTCS 440
Query: 377 LFPEENERVITNVVKTSRTKWRVQDVKELLKGQWKNFGSAMYGSMGTRCMYARQDSDLTT 436
+ EENE V+ +++ + + + G + + S+ Y ++
Sbjct: 441 VLVEENEAVVNFLLERRHCELVPTGLSIGVDGYTRFRDYRFHPSLSMTKRYYPHVHNI-D 499
Query: 437 GFFLAVLDR-------DPKDLEKSLXXXXXXXXXXXXXXXXXXXXSKADYEQDRDVNELD 489
GF++A + + +EK S D E+ ++ E++
Sbjct: 500 GFYVAKIKKLSNAKMSKQGVMEKEKEKAAQKSQNKKNKAEAEASESSDDEEEKKNGVEVN 559
Query: 490 TQVDSVQKRKKKKERSD 506
Q +K+++KK+++D
Sbjct: 560 GQKKPAKKQQQKKQKAD 576
>AC025721-9|AAK29904.3| 639|Caenorhabditis elegans Hypothetical
protein Y48G8AL.5 protein.
Length = 639
Score = 60.9 bits (141), Expect = 3e-09
Identities = 54/189 (28%), Positives = 78/189 (41%), Gaps = 15/189 (7%)
Query: 222 LLAPPSGSIVLDMCAAPGMKTTQTAAYMRNNVGSNSDKRLFSKGHPRNLIDMGKIY-AIE 280
LLAP S VLD+CAAPG KTTQ + N + K + N +DM + Y I
Sbjct: 164 LLAPTSEHFVLDLCAAPGSKTTQLLEMIHEN--EENPKGMVI----ANDVDMKRCYMLIH 217
Query: 281 RNEKRFETLRDFVNKTGSHCVEPIHRDCLEIKKGEFDDVEYILLDPSCSGSG---MDISV 337
KRF T V C + + G + +L D CSG G + +
Sbjct: 218 HTLKRFRTAACAVT-----CEDAARFPHISDSDGGLIQFDRVLADVICSGDGTLRKNPEI 272
Query: 338 HNYIEESRLAKLTSLQEKFLKHAMNAFPRAKRIVYSTCSLFPEENERVITNVVKTSRTKW 397
L +Q + R+VYSTCS+ P E+E V+ +++ S+
Sbjct: 273 WKKWTPQDGLGLHRMQIAIARKGAQQLKVGGRMVYSTCSMNPIEDEAVVAQLLRDSKGSL 332
Query: 398 RVQDVKELL 406
++ D LL
Sbjct: 333 KLVDTSSLL 341
>AC025716-7|AAK95888.1| 465|Caenorhabditis elegans Hypothetical
protein Y39G10AR.21 protein.
Length = 465
Score = 54.0 bits (124), Expect = 3e-07
Identities = 53/183 (28%), Positives = 84/183 (45%), Gaps = 24/183 (13%)
Query: 231 VLDMCAAPGMKTTQTA-AYMRNNVGSNSDKRLFSKGHPRNLIDMGKIYAIERNEKRFETL 289
+LDMCAAPG K+ A + + + + N D +L G + + Y E +E T+
Sbjct: 256 LLDMCAAPGGKSLLAALSNLPSKIVCN-DFKLARLGQLKRAL---MTYVPEDSE----TI 307
Query: 290 RDFVNKTGSHCVEPIHRDCLEIKK-GEFDDVEYILLDPSCSGSGMDISVH--NYIEESRL 346
FV K +D ++K EF+ + +L+D CS + +S N
Sbjct: 308 DKFVLK---------RKDASDVKTWDEFEAYDKVLVDVPCSTDRLSVSTDDGNLFSTGST 358
Query: 347 AK---LTSLQEKFLKHAMNAFPRAKRIVYSTCSLFPEENERVITNVVKTSRTKWRVQDVK 403
+ L LQ K L +A+ + +VYSTC+L P +NE V+ N V R + + V+
Sbjct: 359 QQRLDLPVLQTKILVNALRSVKVGGSVVYSTCTLSPSQNEAVVENAVAVVRNDFGIVTVE 418
Query: 404 ELL 406
E L
Sbjct: 419 ESL 421
>AF039041-7|AAB94189.2| 448|Caenorhabditis elegans Hypothetical
protein W03F8.2 protein.
Length = 448
Score = 32.7 bits (71), Expect = 0.85
Identities = 16/60 (26%), Positives = 28/60 (46%)
Query: 576 KNKVDDTAKCENTEKDKLIVDADLEEPVXXXXXXXXXRDETEEYNVENGNAKRQSKKRSN 635
+ K DD + E ++++ VD +EE V D ++E K++ KK+SN
Sbjct: 90 QEKEDDKKEVEEKKENEKPVDVKVEEKVMVKVEATQNTDNSQELKAPEEKPKKKKKKKSN 149
>L14429-1|AAA28219.2| 575|Caenorhabditis elegans Hypothetical
protein ZK652.6a protein.
Length = 575
Score = 32.3 bits (70), Expect = 1.1
Identities = 18/51 (35%), Positives = 26/51 (50%)
Query: 475 SKADYEQDRDVNELDTQVDSVQKRKKKKERSDETHSTIIDSEGNNLIVDTM 525
S + E D D+ ELD V+ KK+ +T T I E +LI++TM
Sbjct: 297 SADESEDDNDIQELDDMQPIVEDEALKKDEFWKTLKTRISEEDVDLILETM 347
>AF036705-7|AAB95174.1| 324|Caenorhabditis elegans Hypothetical
protein F37C4.8 protein.
Length = 324
Score = 32.3 bits (70), Expect = 1.1
Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 14/104 (13%)
Query: 5 SVKVPRHYKIAANILKKVSTEGGSVKTLLYDDKLRHFRTNVLFALITETIKHSDV-ITK- 62
+VK +H + I +K +TE G ++ LL + F + + IT+ ++ S + +TK
Sbjct: 81 TVKSIQHRRGELMIRRKGATENGDLEKLLMNRDTAKFSEAISISSITDDLEKSRIALTKK 140
Query: 63 ---------IFESCDILQNETRLDPW-LAKIL--TAELLYGKKV 94
+F++ D Q+ +LD W LAK L + E+L K+V
Sbjct: 141 LKVPPETLEVFQAKDCAQHSQKLDCWELAKCLYNSTEMLPEKEV 184
>U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily
assigned gene nameprotein 59 protein.
Length = 1592
Score = 31.9 bits (69), Expect = 1.5
Identities = 18/82 (21%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 92 KKVLPGKSKPEQTISSYKENFEKYLSEHQDDSQIQDVPKPRYVRINTNLLTTSDAIRAFQ 151
K+++ KS+ ++ + + ++ ++ L E Q +D + + +LLT D+++ Q
Sbjct: 541 KQLVMEKSEIQRELDNINDHLDQVLVEKATVVQQRDDMQAELADVGDSLLTEKDSVKRLQ 600
Query: 152 DEGYHFVRCTSGSYEDYLKQIQ 173
DE + +E+ LK+I+
Sbjct: 601 DEA-EKAKKQVADFEEKLKEIE 621
>Z75533-2|CAA99816.1| 245|Caenorhabditis elegans Hypothetical
protein C54G4.3 protein.
Length = 245
Score = 31.5 bits (68), Expect = 2.0
Identities = 14/34 (41%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 479 YEQDRDVNEL-DTQVDSVQKRKKKKERSDETHST 511
YE+D D+N+L D +D V + +KK++ + E H+T
Sbjct: 114 YEKDVDMNDLMDQVIDMVHRTEKKEQDALEAHAT 147
>U41550-1|AAA83284.1| 1057|Caenorhabditis elegans Hypothetical
protein R04A9.2 protein.
Length = 1057
Score = 31.1 bits (67), Expect = 2.6
Identities = 15/40 (37%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 339 NYIEESRLAKLTSLQEKFLKHAMNAFPRAKRIVYSTCSLF 378
+Y +ESRL KLT+LQEK ++ +NA+ ++ + T ++
Sbjct: 812 SYFQESRLHKLTNLQEK-MQICLNAYEQSSSYLPETVVVY 850
>U53332-1|AAK31529.1| 353|Caenorhabditis elegans Hypothetical
protein F59G1.4 protein.
Length = 353
Score = 30.7 bits (66), Expect = 3.4
Identities = 16/45 (35%), Positives = 22/45 (48%)
Query: 308 CLEIKKGEFDDVEYILLDPSCSGSGMDISVHNYIEESRLAKLTSL 352
C + EFD++E DP D+SVH + E KLT+L
Sbjct: 20 CPKRSGSEFDEIEEAPPDPRARSRSEDVSVHCLLREIDDKKLTNL 64
>DQ178637-1|ABD75716.1| 580|Caenorhabditis elegans F59G1.4 protein.
Length = 580
Score = 30.7 bits (66), Expect = 3.4
Identities = 16/45 (35%), Positives = 22/45 (48%)
Query: 308 CLEIKKGEFDDVEYILLDPSCSGSGMDISVHNYIEESRLAKLTSL 352
C + EFD++E DP D+SVH + E KLT+L
Sbjct: 20 CPKRSGSEFDEIEEAPPDPRARSRSEDVSVHCLLREIDDKKLTNL 64
>AL132862-19|CAB70231.2| 640|Caenorhabditis elegans Hypothetical
protein Y73F8A.25a protein.
Length = 640
Score = 30.7 bits (66), Expect = 3.4
Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 5/115 (4%)
Query: 295 KTGSHCVEPIHRDCLEIKKGEFDDVEYILLDPSCSGSGMDIS-VHNYIEESRLAKLTSLQ 353
KTG+ P H + K+ +F+ +E I D S DIS + N+I + + SL
Sbjct: 11 KTGAAAAPP-HESQKKEKENDFEMLEDIKRDEDLFFSETDISNISNFIRTTNKS-FNSLG 68
Query: 354 EKFLKHAMNAFPRAKRIVYSTC-SLFPEENERVITNVVKTSRTKWRVQDVKELLK 407
F++ N A +TC + EE + VI + WR+ D++ L+
Sbjct: 69 NTFVEQFTNRCSLAIFQALATCFEIHSEERDDVIRRL-NIIYIVWRLPDLEPELR 122
>Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical
protein T04A8.13 protein.
Length = 791
Score = 29.9 bits (64), Expect = 6.0
Identities = 20/83 (24%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
Query: 572 KMLNKNKVDDTAKCENTEKDKLIVDAD-LEEPVXXXXXXXXXRDETEEYNVENGNAKRQS 630
K + K D K E+ ++DK + D +E D+ E+ E+ K +
Sbjct: 80 KKEEEKKEDGHEKKEDKKEDKKENENDEKKEKSKDDKKEESKEDKKEKTKTEDNEGKNEE 139
Query: 631 KKRSNNNDFNEIAEKTENIESDQ 653
KK+ + + EK E E D+
Sbjct: 140 KKKEKKEEKKDEKEKKEKTEDDK 162
>U88184-11|AAM98019.1| 123|Caenorhabditis elegans Hypothetical
protein F36H5.2a protein.
Length = 123
Score = 29.9 bits (64), Expect = 6.0
Identities = 22/100 (22%), Positives = 43/100 (43%), Gaps = 6/100 (6%)
Query: 174 NLSEDDFTQDYHVKTIFVFPPGTKLHDHELYFES---KIILQNKATAMAVHLLAPPSGSI 230
+LSE DF+ +Y +K + F G E+ + + K+ + + V L +
Sbjct: 2 SLSERDFSMEYTIKNVSKFSNGENQWSDEMIWRNLIWKLKISKLDDCLGVSLYCSQISNT 61
Query: 231 VLDMCAAPGMKTTQTAAYMRNNVGSNSDKRLFSKGHPRNL 270
+ C G+ T + + +N +++D R F K P +
Sbjct: 62 WIKDCQVSGVVTCEIVS---DNGITHNDSRNFHKKSPSKM 98
>AL034393-5|CAA22311.1| 362|Caenorhabditis elegans Hypothetical
protein Y18D10A.5 protein.
Length = 362
Score = 29.9 bits (64), Expect = 6.0
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 76 LDPWLAKILTAELLYGKKVLPGKSKPEQTISSYK 109
+D W A + AELL G+ + PG S +Q + K
Sbjct: 218 IDVWSAGTVMAELLLGQPIFPGDSGVDQLVEIIK 251
>AF159950-1|AAD45354.1| 362|Caenorhabditis elegans GSK-3 protein.
Length = 362
Score = 29.9 bits (64), Expect = 6.0
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 76 LDPWLAKILTAELLYGKKVLPGKSKPEQTISSYK 109
+D W A + AELL G+ + PG S +Q + K
Sbjct: 218 IDVWSAGTVMAELLLGQPIFPGDSGVDQLVEIIK 251
>Z92847-3|CAB07422.2| 323|Caenorhabditis elegans Hypothetical
protein H01G02.2 protein.
Length = 323
Score = 29.5 bits (63), Expect = 7.9
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 76 LDPWLAKILTAELLYGKKVLPGKSKPEQ 103
+D W + AEL+ GK + PG+S+ EQ
Sbjct: 186 VDIWAIGCILAELVRGKPIFPGRSELEQ 213
>Z81589-5|CAB04722.1| 233|Caenorhabditis elegans Hypothetical
protein T08G5.9 protein.
Length = 233
Score = 29.5 bits (63), Expect = 7.9
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 102 EQTISSYK-ENFEKYLSEHQDDSQIQDVPKPRYVRINTNLLTTSDA 146
E +I S+ EN K + +S +P+P ++R N LTTS++
Sbjct: 63 ETSIVSFTGENANKQKRQRLSESTENSIPEPAFLRSNVTSLTTSES 108
>Z81589-4|CAB04721.1| 256|Caenorhabditis elegans Hypothetical
protein T08G5.8 protein.
Length = 256
Score = 29.5 bits (63), Expect = 7.9
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 102 EQTISSYK-ENFEKYLSEHQDDSQIQDVPKPRYVRINTNLLTTSDA 146
E +I S+ EN K + +S +P+P ++R N LTTS++
Sbjct: 86 ETSIVSFTGENANKQKRQRLSESTENSIPEPAFLRSNVTSLTTSES 131
>AL033514-23|CAA22106.3| 1353|Caenorhabditis elegans Hypothetical
protein Y75B8A.22 protein.
Length = 1353
Score = 29.5 bits (63), Expect = 7.9
Identities = 19/75 (25%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Query: 343 ESRLAKLTSLQEKFLKHAMN------AFPRAKRIVYSTCSLFPEENERVITNVVKTSRTK 396
+S+L Q+KF K ++ FP A + +++ +L+PE +R +T+ + +
Sbjct: 584 DSQLDVPVDAQQKFAKLSIQRSLRSRGFPAAVGLYHASRALWPESFKRGLTDFQDSPGEE 643
Query: 397 WRVQDVKELLKGQWK 411
++Q++++LLK K
Sbjct: 644 DQLQELEQLLKADMK 658
>AL032618-4|CAB63367.1| 353|Caenorhabditis elegans Hypothetical
protein Y42A5A.4 protein.
Length = 353
Score = 29.5 bits (63), Expect = 7.9
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 49 LITETIKHSD-VITKIFESCDILQNETRLDP----WLAKILTAELLYGKKVLPGKSKPEQ 103
+I T ++D V T+ + S ++L + + P W + AELL G+ + PG+S +Q
Sbjct: 150 IINTTEMYTDYVATRWYRSPELLVGDVQYGPPVDIWAVGCVYAELLTGEALWPGRSDIDQ 209
Query: 104 TISSYKENFEKYLSEH 119
+ ++ ++L H
Sbjct: 210 -LYHIRKTLGEFLPRH 224
>AF183401-1|AAF13189.1| 1353|Caenorhabditis elegans TIM-1 protein.
Length = 1353
Score = 29.5 bits (63), Expect = 7.9
Identities = 19/75 (25%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Query: 343 ESRLAKLTSLQEKFLKHAMN------AFPRAKRIVYSTCSLFPEENERVITNVVKTSRTK 396
+S+L Q+KF K ++ FP A + +++ +L+PE +R +T+ + +
Sbjct: 584 DSQLDVPVDAQQKFAKLSIQRSLRSRGFPAAVGLYHASRALWPESFKRGLTDFQDSPGEE 643
Query: 397 WRVQDVKELLKGQWK 411
++Q++++LLK K
Sbjct: 644 DQLQELEQLLKADMK 658
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.314 0.131 0.373
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,419,798
Number of Sequences: 27539
Number of extensions: 651853
Number of successful extensions: 1963
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1934
Number of HSP's gapped (non-prelim): 28
length of query: 663
length of database: 12,573,161
effective HSP length: 86
effective length of query: 577
effective length of database: 10,204,807
effective search space: 5888173639
effective search space used: 5888173639
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 63 (29.5 bits)
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