Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002781-TA|BGIBMGA002781-PA|undefined
(385 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0397 - 2877242-2878479,2878557-2878861,2879862-2880549,288... 36 0.072
08_02_1176 + 24931728-24931877,24933175-24933275,24934410-249347... 32 0.89
04_04_0751 - 27769616-27769684,27769795-27769917,27769998-277707... 31 1.2
11_05_0070 + 18818127-18818404,18818492-18818532,18818691-188189... 30 2.7
06_01_0725 + 5305839-5306279,5306816-5307028,5307229-5307675,530... 30 2.7
02_03_0292 - 17358129-17358213,17358462-17358541,17358627-173587... 30 2.7
01_06_0661 - 30977760-30977783,30977944-30978014,30978045-30979464 30 2.7
12_02_1007 - 25248653-25249078,25249956-25250021,25250108-252502... 30 3.6
08_01_1010 - 10215625-10216335,10216372-10216473 30 3.6
07_03_0234 + 15561003-15561482,15562495-15562590,15562663-15562758 30 3.6
04_01_0365 - 4796780-4796971,4797246-4797327,4797417-4797527,479... 30 3.6
02_05_0710 - 31115116-31115214,31115747-31115851,31116210-311162... 30 3.6
12_01_0477 + 3742751-3745200,3747192-3747502,3747886-3748232 29 4.8
08_01_0090 - 649631-651162,653189-655019,655313-655365,655731-65... 29 6.3
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 29 6.3
06_03_0751 - 24148422-24149072,24149148-24150083 29 6.3
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 29 6.3
01_06_0146 + 26969011-26969995,26970878-26970930 29 6.3
01_03_0280 - 14546334-14546815,14546894-14547560,14550333-145517... 29 6.3
11_01_0273 - 2048527-2049297 29 8.3
04_04_1684 + 35352517-35354642,35354724-35354904,35355794-35355814 29 8.3
04_03_0672 + 18559984-18559986,18560096-18560569,18560666-185608... 29 8.3
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 29 8.3
01_06_1741 + 39581656-39581680,39582627-39582697,39582779-395828... 29 8.3
>02_01_0397 -
2877242-2878479,2878557-2878861,2879862-2880549,
2881998-2882016
Length = 749
Score = 35.5 bits (78), Expect = 0.072
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 16 PSRAPNKLPNKMPRTDKQVPAKDSTLTAVASSPATEISQSASNVLLCSSM 65
P+ PN ++ P ++ S L VASSP TEI + ASN C ++
Sbjct: 97 PTPEPNTANHQSPAKRQRKSDNPSRLPIVASSPTTEIPRPASNARFCHNL 146
>08_02_1176 +
24931728-24931877,24933175-24933275,24934410-24934788,
24935509-24936354,24936555-24936642,24936947-24937039,
24937221-24937318,24937364-24937470,24938266-24938353,
24938748-24939005
Length = 735
Score = 31.9 bits (69), Expect = 0.89
Identities = 15/46 (32%), Positives = 24/46 (52%)
Query: 10 LSAANTPSRAPNKLPNKMPRTDKQVPAKDSTLTAVASSPATEISQS 55
L N APN+LP + ++ Q+ +KD T S P+T S++
Sbjct: 103 LQVDNKDDEAPNELPGEQKSSELQLRSKDQTHPECVSEPSTTRSRT 148
>04_04_0751 -
27769616-27769684,27769795-27769917,27769998-27770770,
27771407-27771773,27772104-27772217,27772307-27772403,
27772968-27773088,27773168-27773252,27773349-27773498,
27773630-27773746,27773819-27773905,27773981-27774049,
27774125-27774181,27774266-27774349,27774477-27774513,
27774721-27774869,27776053-27776538,27776743-27776886,
27776961-27777509,27778332-27778526,27779226-27779310,
27779570-27779670,27779689-27780360,27781101-27781433,
27781957-27782038,27782258-27782334,27782713-27782817,
27783810-27783944,27784437-27785159,27785882-27786663,
27787480-27789187
Length = 2891
Score = 31.5 bits (68), Expect = 1.2
Identities = 23/77 (29%), Positives = 29/77 (37%)
Query: 219 PKPSAKNGPKRNWNGQSSAGILSRGAHAXXXXXXGTPLHPATPLNHPASHRPRRTPLSPG 278
P+ S + P+ GQ S S A G+ L P T + P R+ SP
Sbjct: 5 PRESLDSSPEPPPPGQDSDEQFSAVPLADEVRAEGSELDPDTSAGTSVAVTPARSEPSPP 64
Query: 279 QLRHRRPANLNYGPTPP 295
R RRP L P P
Sbjct: 65 PPRRRRPRPLGVPPDAP 81
>11_05_0070 +
18818127-18818404,18818492-18818532,18818691-18818990,
18820005-18820757,18820840-18820889
Length = 473
Score = 30.3 bits (65), Expect = 2.7
Identities = 16/45 (35%), Positives = 19/45 (42%)
Query: 157 EGACGYSSRDGSDILSRLLCAEAGPDRAALSATAHHDADPQLSTA 201
E CG+S RDGS +L G DR L D D L +
Sbjct: 89 EKTCGHSERDGSGVLLEPEDTYVGEDRFGLDDDNEQDCDGALDNS 133
>06_01_0725 +
5305839-5306279,5306816-5307028,5307229-5307675,
5307768-5307917,5308185-5308486,5309718-5309758,
5311294-5311968,5312343-5312386
Length = 770
Score = 30.3 bits (65), Expect = 2.7
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 5/42 (11%)
Query: 268 HRPRRTPLSPGQLRHRRPANLNYGPTPPGTPERGAVSPVPDL 309
HR RR L P ++R RR GP PP P R S V D+
Sbjct: 113 HRRRRRRLRPRRVRSRRS-----GPPPPDVPGRWHPSQVQDM 149
>02_03_0292 -
17358129-17358213,17358462-17358541,17358627-17358797,
17359440-17359541,17360216-17360365,17360549-17360671,
17360781-17360867,17361209-17361289,17362071-17362210,
17363490-17363534,17365315-17365485,17365784-17365805
Length = 418
Score = 30.3 bits (65), Expect = 2.7
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 215 NGLTPKPSAKNGPKRNWNGQSSAGILSRGAHAXXXXXXGTPLH 257
+G TP A G + + + +LSRGAH GTPLH
Sbjct: 64 SGDTPLAYAVRGRSIDGECEIAKILLSRGAHVDSFSSHGTPLH 106
>01_06_0661 - 30977760-30977783,30977944-30978014,30978045-30979464
Length = 504
Score = 30.3 bits (65), Expect = 2.7
Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Query: 237 AGILSRGAHAXXXXXXGTPLHPATPLNHPASHRPRRTPLSPGQLRHRRPANLNYGPTPPG 296
AG+L R A LHP T + + AS R +P P QL + + P
Sbjct: 27 AGLL-RAACFSRPTASSPALHPVTTVTNRASARAAVSPGGPSQLGLGGRVSFSTAPDGTA 85
Query: 297 TPERGAVSP 305
+P+ G+ P
Sbjct: 86 SPDGGSALP 94
>12_02_1007 -
25248653-25249078,25249956-25250021,25250108-25250260,
25250961-25251336,25252001-25252143
Length = 387
Score = 29.9 bits (64), Expect = 3.6
Identities = 15/52 (28%), Positives = 22/52 (42%)
Query: 256 LHPATPLNHPASHRPRRTPLSPGQLRHRRPANLNYGPTPPGTPERGAVSPVP 307
+HP + ++ P P P+ PG + P P PP GA+ P P
Sbjct: 285 VHPQSYMHPPPPPPPVTMPMHPGMVLAAPPPGAAPPPGPPAMVPFGAMLPYP 336
>08_01_1010 - 10215625-10216335,10216372-10216473
Length = 270
Score = 29.9 bits (64), Expect = 3.6
Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 5/48 (10%)
Query: 258 PATPLNHPASHRPRRTPLSPGQLRHRRPANLNYGPTPPGTPERGAVSP 305
P+TP AS P TP +P RR A+ +Y P+ P TP R A SP
Sbjct: 75 PSTPPRRAAS--PDYTPSTP--TTPRRAASPDYTPSTP-TPPRRAASP 117
>07_03_0234 + 15561003-15561482,15562495-15562590,15562663-15562758
Length = 223
Score = 29.9 bits (64), Expect = 3.6
Identities = 26/92 (28%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 219 PKPSAKNGPKRNWNGQSSAGILSRGAHAXXXXXXGTPLHPATPLNHPASHRPRRTPLSPG 278
P PSA+ + + SS+ + A +P A+P P S RR+PL+
Sbjct: 33 PPPSARARARAGPSSPSSSSPST--PTAAGLSFLSSPGSSASPNPAPRSRSSRRSPLASP 90
Query: 279 QLRHRRPANLNYGPTPPG-TPERGAVSPVPDL 309
+ P + P P +P AVS V DL
Sbjct: 91 RTGTASPLSAAVAPGGPAPSPASAAVSSVGDL 122
>04_01_0365 -
4796780-4796971,4797246-4797327,4797417-4797527,
4797608-4797859,4797945-4800115
Length = 935
Score = 29.9 bits (64), Expect = 3.6
Identities = 25/72 (34%), Positives = 31/72 (43%), Gaps = 7/72 (9%)
Query: 236 SAGILSRGAHAXXXXXXGTPLHPATPLNHPASHRPRRTPLSPGQLRHRRPANLNYGPTPP 295
SA +L+ G+ T PA P + P PR P SP LR P PTPP
Sbjct: 459 SAAVLAVGSSTPSSSQAMTAAAPAPP-SPPEPPSPRHPP-SPPPLRSP-PRQ----PTPP 511
Query: 296 GTPERGAVSPVP 307
+P + PVP
Sbjct: 512 PSPSQQPPLPVP 523
>02_05_0710 -
31115116-31115214,31115747-31115851,31116210-31116260,
31116393-31116494,31116651-31116883,31117306-31117497,
31118142-31118322,31118424-31118623,31119105-31119645
Length = 567
Score = 29.9 bits (64), Expect = 3.6
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 8/54 (14%)
Query: 258 PATPLNHPASHRPRRTPLSPGQL-----RHRRPANLNYGPTPPGTPERGAVSPV 306
PA+P+ A+ P P + G+ RH PA+ + G PP P RG PV
Sbjct: 27 PASPVASTAADNP--APAAAGRRGRKSRRHEAPADAD-GSRPPSPPRRGEAKPV 77
>12_01_0477 + 3742751-3745200,3747192-3747502,3747886-3748232
Length = 1035
Score = 29.5 bits (63), Expect = 4.8
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 4/52 (7%)
Query: 256 LHPATPLNHPASHRPRRTPLSPGQLRHRRPANLNYGPTPPGTPERGAVSPVP 307
+HP PL P+ P P SP HR PA+ G G P +P+P
Sbjct: 1 MHPLPPL--PSPPPPPTPPPSPSNRNHRHPAS-RVG-AARGGPRSDPATPIP 48
>08_01_0090 -
649631-651162,653189-655019,655313-655365,655731-655735,
656209-656411,656837-657292,657718-657805,657917-658017,
658404-658631,659128-659445,659528-659812,660148-660711
Length = 1887
Score = 29.1 bits (62), Expect = 6.3
Identities = 23/78 (29%), Positives = 30/78 (38%), Gaps = 3/78 (3%)
Query: 222 SAKNG-PKRNWNGQSSAGILSRGAHAXXXXXXGTPLHPATPLNHPASHRPRRTPLSPGQL 280
+ +NG PK + G LS H +P HPA+ L+ R PG+L
Sbjct: 742 TTQNGRPKDGESTSVKKGTLS--PHGSRESPPPSPPHPASSLSAILYSCTARRARRPGEL 799
Query: 281 RHRRPANLNYGPTPPGTP 298
H R A L P P
Sbjct: 800 AHARAATLGLAAHPSVLP 817
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 29.1 bits (62), Expect = 6.3
Identities = 17/53 (32%), Positives = 20/53 (37%)
Query: 255 PLHPATPLNHPASHRPRRTPLSPGQLRHRRPANLNYGPTPPGTPERGAVSPVP 307
P P P + P + P PLSP P L GP P P + P P
Sbjct: 1155 PCQPPLPPSPPPATPPPPPPLSPSLPPPPPPPPLPSGPPPQPAPPPLPIQPPP 1207
>06_03_0751 - 24148422-24149072,24149148-24150083
Length = 528
Score = 29.1 bits (62), Expect = 6.3
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Query: 281 RHRRPANLNYGPTPPGTPERG---AVSPVPDLALH 312
RHRR + L P+P G P G ++P+P ALH
Sbjct: 32 RHRRSSGLRLPPSPFGLPILGHLHLLAPLPHQALH 66
>05_01_0028 +
182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 29.1 bits (62), Expect = 6.3
Identities = 28/103 (27%), Positives = 38/103 (36%), Gaps = 1/103 (0%)
Query: 208 LLNLMRINGL-TPKPSAKNGPKRNWNGQSSAGILSRGAHAXXXXXXGTPLHPATPLNHPA 266
LLNLM + L P SA + P N + +SS+ + P P + P
Sbjct: 12 LLNLMLLLLLLAPYCSAVSVPNNNTHHRSSSPTQTTLQQLHSPDSPPPPPLPTPTVTTPT 71
Query: 267 SHRPRRTPLSPGQLRHRRPANLNYGPTPPGTPERGAVSPVPDL 309
P P P + P PTPP P + +P P L
Sbjct: 72 PPPPPPAPRPPRRHHRIPPPPPPLLPTPPPPPASISPTPAPPL 114
>01_06_0146 + 26969011-26969995,26970878-26970930
Length = 345
Score = 29.1 bits (62), Expect = 6.3
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Query: 257 HPATPLNHPASHRPRRTPLSPGQLRHRRPANLNYGPTPPGTPERGAVS-PVPDLA 310
HP P HPA+ P +P +P PA+ PT P G S P+P A
Sbjct: 22 HPPPPTPHPATDPPPISPQNPTPPPPPLPASA-AAPTTPSPNHSGDPSRPIPSQA 75
>01_03_0280 -
14546334-14546815,14546894-14547560,14550333-14551754,
14552831-14553127
Length = 955
Score = 29.1 bits (62), Expect = 6.3
Identities = 19/51 (37%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Query: 261 PLNHPASHR-PRRTPLSPGQLRHRRPANLNYGPTPPGTPERGAVSPVPDLA 310
PL PA+ PRR P R RR + TPP P R + PD A
Sbjct: 3 PLPRPAAAATPRRHRHGPATPRRRRRRHAAAVATPPPPPPRRRANRCPDAA 53
>11_01_0273 - 2048527-2049297
Length = 256
Score = 28.7 bits (61), Expect = 8.3
Identities = 24/61 (39%), Positives = 28/61 (45%), Gaps = 5/61 (8%)
Query: 254 TPLHPATP---LNHPASHRPRRTPLSPGQLRHRRPANLNYGPTPPGTPERGAVSPVPDLA 310
TPL +T L+HP H RR PLS L R +NL P P G + P P L
Sbjct: 44 TPLPTSTTVVVLHHP--HALRRNPLSTLPLLARSLSNLRLIPGRRLLPSSGPLIPNPVLL 101
Query: 311 L 311
L
Sbjct: 102 L 102
>04_04_1684 + 35352517-35354642,35354724-35354904,35355794-35355814
Length = 775
Score = 28.7 bits (61), Expect = 8.3
Identities = 14/39 (35%), Positives = 18/39 (46%)
Query: 257 HPATPLNHPASHRPRRTPLSPGQLRHRRPANLNYGPTPP 295
H P ++P HR RRTP P + H L+ PP
Sbjct: 35 HHRAPPSNPNPHRDRRTPDRPRRHHHEDSLPLHVHLPPP 73
>04_03_0672 +
18559984-18559986,18560096-18560569,18560666-18560836,
18561494-18561640
Length = 264
Score = 28.7 bits (61), Expect = 8.3
Identities = 18/74 (24%), Positives = 27/74 (36%), Gaps = 5/74 (6%)
Query: 230 NWNGQSSAGILSRGAHAXXXXXXGTPLHPATPLNHPASHRPRRTPLSPG---QLRHRRPA 286
NW+ + + +A G HP P HP P ++PL P + + P
Sbjct: 10 NWDTTGNTPYTQKFENARKNKKAGISSHPNDPRRHP--EPPSKSPLHPAYTPDAQGQSPM 67
Query: 287 NLNYGPTPPGTPER 300
N +G P R
Sbjct: 68 NPQHGRRQEADPHR 81
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 28.7 bits (61), Expect = 8.3
Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 2/57 (3%)
Query: 243 GAHAXXXXXXGTPLHPATPLNHPASHRP-RRTPLSPGQLRHRRPANLNYGPTPPGTP 298
G+H T L A P P SH +R P P + H P + P+PP P
Sbjct: 1011 GSHGILATTS-TELIDAGPQLPPLSHLEWKRCPHHPPERPHYLPGEVGGAPSPPSPP 1066
>01_06_1741 +
39581656-39581680,39582627-39582697,39582779-39582898,
39583034-39583094,39583186-39583242,39583413-39583600,
39583747-39583818,39583953-39584180
Length = 273
Score = 28.7 bits (61), Expect = 8.3
Identities = 20/73 (27%), Positives = 29/73 (39%), Gaps = 1/73 (1%)
Query: 164 SRDGSDILSRLLCAEAGPDRAALSATAHHDADPQLSTAAHTDMLLLNLMRINGLTPKPSA 223
S D + S++LCA G + + A T + DM + ++ TP P A
Sbjct: 189 SSDEEETPSKILCAGTGKRSGYVHVATPYPAKQAKKTPVNNDMAKQSSGYVHVATPYP-A 247
Query: 224 KNGPKRNWNGQSS 236
K KR N S
Sbjct: 248 KQAKKRTANNDMS 260
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.311 0.127 0.377
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,506,648
Number of Sequences: 37544
Number of extensions: 446436
Number of successful extensions: 1109
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 1096
Number of HSP's gapped (non-prelim): 28
length of query: 385
length of database: 14,793,348
effective HSP length: 83
effective length of query: 302
effective length of database: 11,677,196
effective search space: 3526513192
effective search space used: 3526513192
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 61 (28.7 bits)
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