GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002781-TA|BGIBMGA002781-PA|undefined
         (385 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ007394-1|CAA07489.1|  112|Anopheles gambiae mucin protein.           25   2.7  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         25   4.6  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    25   4.6  
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    25   4.6  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    24   6.1  
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    24   6.1  

>AJ007394-1|CAA07489.1|  112|Anopheles gambiae mucin protein.
          Length = 112

 Score = 25.4 bits (53), Expect = 2.7
 Identities = 15/43 (34%), Positives = 17/43 (39%)

Query: 8  TLLSAANTPSRAPNKLPNKMPRTDKQVPAKDSTLTAVASSPAT 50
          T   A  T + AP       P T   V    +T T VAS P T
Sbjct: 33 TTTVAPTTTTVAPTTTTTVAPTTTTTVAPGQTTTTTVASGPVT 75


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 24.6 bits (51), Expect = 4.6
 Identities = 12/34 (35%), Positives = 17/34 (50%)

Query: 150  MSGENDIEGACGYSSRDGSDILSRLLCAEAGPDR 183
            + G  + E A GY  RD S +L  +  A   P+R
Sbjct: 1979 LQGFEEFEQALGYRFRDRSYLLQAMTHASYSPNR 2012



 Score = 23.8 bits (49), Expect = 8.1
 Identities = 10/23 (43%), Positives = 13/23 (56%)

Query: 219  PKPSAKNGPKRNWNGQSSAGILS 241
            PK  +    + N NG  SAG+LS
Sbjct: 1615 PKQHSMRSDEANKNGHDSAGVLS 1637


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 24.6 bits (51), Expect = 4.6
 Identities = 26/99 (26%), Positives = 38/99 (38%), Gaps = 10/99 (10%)

Query: 216 GLTPKPSAKNGPKRNWNGQSSAGILSRGAHAXXXXXXGTPLHPATPLNHPASHRPRRTPL 275
           G   +P + +G   NW+  S +G  S G+              +T LNH     P  +  
Sbjct: 480 GNRDEPHSSSG---NWSASSESGRTSIGSEITTTNTHPKSSASSTSLNH---SNPISSSA 533

Query: 276 SPGQLRHRRPANLNYGPTPPGTPERGAVSPVPDLALHDY 314
            P  +  RR    N   +   T E G ++  PDL   DY
Sbjct: 534 PPSSIVSRR-RFFNTSASSSVTSE-GTIT--PDLQTFDY 568


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 24.6 bits (51), Expect = 4.6
 Identities = 26/99 (26%), Positives = 38/99 (38%), Gaps = 10/99 (10%)

Query: 216 GLTPKPSAKNGPKRNWNGQSSAGILSRGAHAXXXXXXGTPLHPATPLNHPASHRPRRTPL 275
           G   +P + +G   NW+  S +G  S G+              +T LNH     P  +  
Sbjct: 481 GNRDEPHSSSG---NWSASSESGRTSIGSEITTTNTHPKSSASSTSLNH---SNPISSSA 534

Query: 276 SPGQLRHRRPANLNYGPTPPGTPERGAVSPVPDLALHDY 314
            P  +  RR    N   +   T E G ++  PDL   DY
Sbjct: 535 PPSSIVSRR-RFFNTSASSSVTSE-GTIT--PDLQTFDY 569


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 24.2 bits (50), Expect = 6.1
 Identities = 12/34 (35%), Positives = 22/34 (64%)

Query: 207  LLLNLMRINGLTPKPSAKNGPKRNWNGQSSAGIL 240
            L+  L R++ +  K S K+  +RN N +++AG+L
Sbjct: 2624 LVTILRRLDKVFLKISKKSSVRRNTNWEAAAGLL 2657


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 24.2 bits (50), Expect = 6.1
 Identities = 24/120 (20%), Positives = 46/120 (38%), Gaps = 13/120 (10%)

Query: 239 ILSRGAHAXXXXXXGTPLHPATPLNHPASHRPRRTPLSPGQLRHRRPANLNYGPTPPGT- 297
           +L   A        GT + P+ P + P+   P    L   ++  R P++    P  P T 
Sbjct: 417 MLQNNARESISPASGTGMSPSYPHSEPS---PDYAMLIGSRVIQRTPSSSP--PLTPNTI 471

Query: 298 -------PERGAVSPVPDLALHDYWPXXXXXXDNDEVEFILDCNDTLFDMLLNSLSLEGA 350
                  P++    P P   +           + D++   ++    + ++L + LSLEG+
Sbjct: 472 CGLIAPPPQQQQQDPTPQTLMGQVMEALNSQTNIDDININVEAFPCVDEVLKHELSLEGS 531


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.311    0.127    0.377 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 347,099
Number of Sequences: 2123
Number of extensions: 14508
Number of successful extensions: 33
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 29
Number of HSP's gapped (non-prelim): 7
length of query: 385
length of database: 516,269
effective HSP length: 65
effective length of query: 320
effective length of database: 378,274
effective search space: 121047680
effective search space used: 121047680
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 49 (23.8 bits)