Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002781-TA|BGIBMGA002781-PA|undefined
(385 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73978-3|CAA98293.1| 501|Caenorhabditis elegans Hypothetical pr... 32 0.79
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 31 1.0
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 31 1.0
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 31 1.0
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 31 1.8
AL033536-5|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 30 2.4
Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z73105-2|CAA97439.2| 803|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z93385-3|CAB07641.1| 558|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z92773-4|CAB07130.2| 584|Caenorhabditis elegans Hypothetical pr... 29 7.3
Z81114-8|CAB97236.1| 584|Caenorhabditis elegans Hypothetical pr... 29 7.3
Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical pr... 28 9.7
Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical pr... 28 9.7
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 28 9.7
>Z73978-3|CAA98293.1| 501|Caenorhabditis elegans Hypothetical
protein ZC302.2a protein.
Length = 501
Score = 31.9 bits (69), Expect = 0.79
Identities = 26/88 (29%), Positives = 34/88 (38%), Gaps = 2/88 (2%)
Query: 231 WNGQSSAGILSRGAHAXXXXXXGTPLHPATPLNHPASHRPRRTPLSPG-QLRHRRPANLN 289
WN ++ G HP P SH+ + PL+ Q P +
Sbjct: 48 WNHYNAVATPPIGVPQTARPPSNQSPHPNPPGYPYQSHQQQFHPLAIAFQQPFGLPQQVI 107
Query: 290 YGPTPPG-TPERGAVSPVPDLALHDYWP 316
Y P PPG TP R VSPV L ++P
Sbjct: 108 YPPPPPGFTPHRVQVSPVGLLGPPGFFP 135
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 31.5 bits (68), Expect = 1.0
Identities = 20/67 (29%), Positives = 27/67 (40%), Gaps = 1/67 (1%)
Query: 242 RGAHAXXXXXXGTPLHPATPLNHP-ASHRPRRTPLSPGQLRHRRPANLNYGPTPPGTPER 300
R A G+ + A P P S+ P+ P P + P N + P PP P
Sbjct: 183 RRASQSSSTSAGSSIPHAPPPPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPV 242
Query: 301 GAVSPVP 307
GA +P P
Sbjct: 243 GAGAPPP 249
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 31.5 bits (68), Expect = 1.0
Identities = 20/67 (29%), Positives = 27/67 (40%), Gaps = 1/67 (1%)
Query: 242 RGAHAXXXXXXGTPLHPATPLNHP-ASHRPRRTPLSPGQLRHRRPANLNYGPTPPGTPER 300
R A G+ + A P P S+ P+ P P + P N + P PP P
Sbjct: 169 RRASQSSSTSAGSSIPHAPPPPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPV 228
Query: 301 GAVSPVP 307
GA +P P
Sbjct: 229 GAGAPPP 235
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 31.5 bits (68), Expect = 1.0
Identities = 20/67 (29%), Positives = 27/67 (40%), Gaps = 1/67 (1%)
Query: 242 RGAHAXXXXXXGTPLHPATPLNHP-ASHRPRRTPLSPGQLRHRRPANLNYGPTPPGTPER 300
R A G+ + A P P S+ P+ P P + P N + P PP P
Sbjct: 169 RRASQSSSTSAGSSIPHAPPPPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPV 228
Query: 301 GAVSPVP 307
GA +P P
Sbjct: 229 GAGAPPP 235
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 30.7 bits (66), Expect = 1.8
Identities = 23/63 (36%), Positives = 25/63 (39%), Gaps = 5/63 (7%)
Query: 255 PLHPATPLN-HPASHRPRRTPLSPGQLRHRRPANLNYGP---TPPGTPERGAVSPVPDLA 310
P P P P S PRR P++P RRP P PP TP P P L
Sbjct: 141 PPPPRVPRTPPPRSPPPRRPPMTPPS-PQRRPPRTPPSPEPRNPPRTPPSPIPPPPPRLN 199
Query: 311 LHD 313
HD
Sbjct: 200 SHD 202
>AL033536-5|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 30.3 bits (65), Expect = 2.4
Identities = 28/90 (31%), Positives = 34/90 (37%), Gaps = 9/90 (10%)
Query: 215 NGLTPKPSAKNGPKRNW---NGQSSAGILSRGAHAXXXXXXGTPLHPATPLNHPASHRPR 271
NG +P + NGP NW NG S G G P P+ P N P + P
Sbjct: 1020 NGPSPNGPSPNGPTPNWPSPNGPSPNG--PNGPSDPNKPGPNGPNGPSDP-NKPGPNGPN 1076
Query: 272 R--TPLSPGQLRHRRPANLNY-GPTPPGTP 298
P PG P++ N GP P P
Sbjct: 1077 EPSDPNKPGPNGPNGPSDPNKPGPNGPNEP 1106
>Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical protein
W06A7.3c protein.
Length = 2484
Score = 29.5 bits (63), Expect = 4.2
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 270 PRRTPLSPGQLRHRR-PANLNYGPTPPGTPERGAVSPVPDLA 310
P P+ PGQ++ R P + PT P P R S +P +A
Sbjct: 1606 PEPEPVVPGQVQERIIPIEVEQAPTIPQRPPRAPKSELPKVA 1647
>Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical protein
W06A7.3a protein.
Length = 2607
Score = 29.5 bits (63), Expect = 4.2
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 270 PRRTPLSPGQLRHRR-PANLNYGPTPPGTPERGAVSPVPDLA 310
P P+ PGQ++ R P + PT P P R S +P +A
Sbjct: 1606 PEPEPVVPGQVQERIIPIEVEQAPTIPQRPPRAPKSELPKVA 1647
>Z73105-2|CAA97439.2| 803|Caenorhabditis elegans Hypothetical
protein R13.4 protein.
Length = 803
Score = 29.5 bits (63), Expect = 4.2
Identities = 21/79 (26%), Positives = 29/79 (36%), Gaps = 4/79 (5%)
Query: 224 KNGPKRNWNGQSSAGILSRGAHAXXXXXXGTPLH----PATPLNHPASHRPRRTPLSPGQ 279
K G K+ N + GI + T +H P +P+ P S P T L
Sbjct: 580 KRGKKKTDNDANGNGIKRIKSEIIVKQETFTDMHGRNVPFSPMPMPGSVPPDWTRLQSPS 639
Query: 280 LRHRRPANLNYGPTPPGTP 298
+ P + GP P TP
Sbjct: 640 FSMQSPNKVQLGPATPATP 658
>Z93385-3|CAB07641.1| 558|Caenorhabditis elegans Hypothetical
protein M01E5.3 protein.
Length = 558
Score = 29.1 bits (62), Expect = 5.5
Identities = 26/88 (29%), Positives = 32/88 (36%), Gaps = 10/88 (11%)
Query: 232 NGQS--SAGILSRGAHAXXXXXXGTPLHPATPLNHPASHRP--------RRTPLSPGQLR 281
NGQ + I A A P PA P ++ P R PL+P Q R
Sbjct: 174 NGQEIVNPAIAPGAAAAAQPALEAAPAAPAAGAAAPEANAPQAAPPGIRRPIPLNPDQAR 233
Query: 282 HRRPANLNYGPTPPGTPERGAVSPVPDL 309
H P LN G P + G V P +
Sbjct: 234 HIIPQLLNPGGAQPAPVQDGPVRGPPGI 261
>Z92773-4|CAB07130.2| 584|Caenorhabditis elegans Hypothetical
protein W08E3.2 protein.
Length = 584
Score = 28.7 bits (61), Expect = 7.3
Identities = 24/81 (29%), Positives = 33/81 (40%), Gaps = 6/81 (7%)
Query: 220 KPSAKNGPKRNWNGQSSAGILSRGAHAXXXXXXGTPLHPATPLNHPASHR---PRRTP-L 275
KP+A + N + G + RG GT P + L SH PRR+
Sbjct: 260 KPAAPPSSEENEEDEDD-GAIRRGQRRAVPLRRGTTSGPPSRLRGRMSHPMGPPRRSSGA 318
Query: 276 SPGQLRHRRPA-NLNYGPTPP 295
P +RRP + + GP PP
Sbjct: 319 PPSSASNRRPVESSSRGPPPP 339
>Z81114-8|CAB97236.1| 584|Caenorhabditis elegans Hypothetical
protein W08E3.2 protein.
Length = 584
Score = 28.7 bits (61), Expect = 7.3
Identities = 24/81 (29%), Positives = 33/81 (40%), Gaps = 6/81 (7%)
Query: 220 KPSAKNGPKRNWNGQSSAGILSRGAHAXXXXXXGTPLHPATPLNHPASHR---PRRTP-L 275
KP+A + N + G + RG GT P + L SH PRR+
Sbjct: 260 KPAAPPSSEENEEDEDD-GAIRRGQRRAVPLRRGTTSGPPSRLRGRMSHPMGPPRRSSGA 318
Query: 276 SPGQLRHRRPA-NLNYGPTPP 295
P +RRP + + GP PP
Sbjct: 319 PPSSASNRRPVESSSRGPPPP 339
>Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.6 protein.
Length = 290
Score = 28.3 bits (60), Expect = 9.7
Identities = 27/87 (31%), Positives = 29/87 (33%), Gaps = 6/87 (6%)
Query: 221 PSAKNGPKRNWNGQSSAGILSRGAHAXXXXXXGTPLHPATPLNHPASHRPRRTPLSPGQL 280
PS G G AG A G P HP P R R TP G
Sbjct: 150 PSGAPGQDAVGEGPGPAGPQGPAGDAGAPGQAGAPGHPGAP--GQGGQRSRGTPGPAGAP 207
Query: 281 RHRRPANLNYGPTPPGTPERGAVSPVP 307
+ PA GP PG GA +P P
Sbjct: 208 GPQGPAG---GPGQPG-QSGGAGAPGP 230
>Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.4 protein.
Length = 290
Score = 28.3 bits (60), Expect = 9.7
Identities = 27/87 (31%), Positives = 29/87 (33%), Gaps = 6/87 (6%)
Query: 221 PSAKNGPKRNWNGQSSAGILSRGAHAXXXXXXGTPLHPATPLNHPASHRPRRTPLSPGQL 280
PS G G AG A G P HP P R R TP G
Sbjct: 150 PSGAPGQDAVGGGPGPAGPQGPAGDAGAPGQAGAPGHPGAP--GQGGQRSRGTPGPSGAP 207
Query: 281 RHRRPANLNYGPTPPGTPERGAVSPVP 307
+ PA GP PG GA +P P
Sbjct: 208 GPQGPAG---GPGQPG-QSGGAGAPGP 230
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 28.3 bits (60), Expect = 9.7
Identities = 21/65 (32%), Positives = 25/65 (38%), Gaps = 4/65 (6%)
Query: 243 GAHAXXXXXXGTPLHPATPLNHPASHRPRRTPLSPGQLRHRRPANLNYGPTPPGTPERGA 302
GA A G P P P + P P +PG + +GP PPG P GA
Sbjct: 388 GAFAPPPSAFGAPQGPGGPGGYGPP--PPGGPGAPGSYGPPQGGPGGFGPPPPGGP--GA 443
Query: 303 VSPVP 307
P P
Sbjct: 444 YGPPP 448
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.311 0.127 0.377
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,331,902
Number of Sequences: 27539
Number of extensions: 344490
Number of successful extensions: 810
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 804
Number of HSP's gapped (non-prelim): 19
length of query: 385
length of database: 12,573,161
effective HSP length: 83
effective length of query: 302
effective length of database: 10,287,424
effective search space: 3106802048
effective search space used: 3106802048
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 60 (28.3 bits)
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