Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002779-TA|BGIBMGA002779-PA|IPR000994|Peptidase M24,
catalytic core, IPR013953|FACT complex subunit Spt16p/Cdc68p,
IPR013719|Domain of unknown function DUF1747, eukaryote
(1136 letters)
Database: tribolium
317 sequences; 114,650 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ659251-1|ABG47449.1| 366|Tribolium castaneum chitinase 11 pro... 28 0.32
AY873913-1|AAW67569.2| 377|Tribolium castaneum chitinase 2 prot... 26 1.7
DQ855500-1|ABH88187.1| 126|Tribolium castaneum chemosensory pro... 25 2.9
DQ659249-1|ABG47447.1| 383|Tribolium castaneum chitinase 9 prot... 25 3.9
AY873914-1|AAW67570.1| 384|Tribolium castaneum chitinase 3 prot... 25 3.9
AY873915-1|AAW67571.2| 384|Tribolium castaneum chitinase 16 pro... 24 5.1
AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory recept... 24 5.1
AM292365-1|CAL23177.1| 313|Tribolium castaneum gustatory recept... 24 5.1
AM292325-1|CAL23137.2| 309|Tribolium castaneum gustatory recept... 24 5.1
DQ659252-1|ABG47450.1| 377|Tribolium castaneum chitinase 13 pro... 24 6.8
>DQ659251-1|ABG47449.1| 366|Tribolium castaneum chitinase 11
protein.
Length = 366
Score = 28.3 bits (60), Expect = 0.32
Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Query: 118 DKENFNKLLQEIKKSKSGK-TLGIFVKDN 145
DKENF KLLQE+K++ K L + V N
Sbjct: 152 DKENFVKLLQEMKQAFGSKYVLSVTVSAN 180
>AY873913-1|AAW67569.2| 377|Tribolium castaneum chitinase 2
protein.
Length = 377
Score = 25.8 bits (54), Expect = 1.7
Identities = 11/16 (68%), Positives = 14/16 (87%)
Query: 117 KDKENFNKLLQEIKKS 132
KDKENF LL+EIK++
Sbjct: 151 KDKENFITLLREIKEA 166
>DQ855500-1|ABH88187.1| 126|Tribolium castaneum chemosensory
protein 14 protein.
Length = 126
Score = 25.0 bits (52), Expect = 2.9
Identities = 13/47 (27%), Positives = 24/47 (51%)
Query: 115 NDKDKENFNKLLQEIKKSKSGKTLGIFVKDNYPGEFCESWKAVLKGE 161
N+K KE K+L + K+K + K + GE+ + + +L+ E
Sbjct: 76 NEKHKEGVRKVLHHLIKNKPNWWQELEAKFDPKGEYKQKYNKLLEKE 122
>DQ659249-1|ABG47447.1| 383|Tribolium castaneum chitinase 9
protein.
Length = 383
Score = 24.6 bits (51), Expect = 3.9
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 116 DKDKENFNKLLQEIKK--SKSGKTLGIFVKDNYPGEFCESWKAVLKGEKSENVDVSSAIA 173
D+DK NF LL E+K + GKTL V C+ + K +EN+D+ + +A
Sbjct: 152 DEDKVNFVTLLGELKSALNAKGKTLSAAVSGGIAS--CKLSYDIAK--VAENLDMINVMA 207
>AY873914-1|AAW67570.1| 384|Tribolium castaneum chitinase 3
protein.
Length = 384
Score = 24.6 bits (51), Expect = 3.9
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 116 DKDKENFNKLLQEIKKSKSGKTLGIFVKDNYPGEFCESWKAVLKGEKSENVDVSSAIA 173
D+DK NF LL E+K + + K G+ + G + + +EN+D+ + +A
Sbjct: 153 DEDKVNFVTLLGELKSALNAK--GLILSAAVSGGIASCKLSYDIAKVAENLDMINVMA 208
>AY873915-1|AAW67571.2| 384|Tribolium castaneum chitinase 16
protein.
Length = 384
Score = 24.2 bits (50), Expect = 5.1
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 116 DKDKENFNKLLQEIKKSKSGKTLGIFVKDNYPGEFCESWKAVLKGEKSENVDVSSAIA 173
D+DK NF LL E+K + + K G+ + G + + +EN+D+ + +A
Sbjct: 153 DEDKVNFVTLLGELKSALNAK--GMILSAAVSGGIASCKLSYDIAKVAENLDMINVMA 208
>AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory receptor
candidate 51 protein.
Length = 771
Score = 24.2 bits (50), Expect = 5.1
Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 186 TIKKACLVTVDVFTKYLKDQIMEIIDSDKKVKHSKLAEGVETAVSDKKYV 235
T +CL+ DV+ ++L ++ I+ K ++ L + +ETA K V
Sbjct: 170 TFLNSCLM--DVYYEFLLISLINILIRSFKSRYKDLNQKLETACEQSKSV 217
>AM292365-1|CAL23177.1| 313|Tribolium castaneum gustatory receptor
candidate 44 protein.
Length = 313
Score = 24.2 bits (50), Expect = 5.1
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 534 VDRKYETVILPIFGVPVPFHIST 556
++R +E +L IFGV F IST
Sbjct: 223 LNRYFEVQVLTIFGVSFYFFIST 245
>AM292325-1|CAL23137.2| 309|Tribolium castaneum gustatory receptor
candidate 4 protein.
Length = 309
Score = 24.2 bits (50), Expect = 5.1
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 534 VDRKYETVILPIFGVPVPFHIST 556
++R +E +L IFGV F IST
Sbjct: 219 LNRYFEVQVLTIFGVSFYFFIST 241
>DQ659252-1|ABG47450.1| 377|Tribolium castaneum chitinase 13
protein.
Length = 377
Score = 23.8 bits (49), Expect = 6.8
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 117 KDKENFNKLLQEIKKSKSGKTLGIFVKDN-YPGE 149
+DK FN+LLQ +K + + K + V N PGE
Sbjct: 148 QDKATFNRLLQGLKDAFAPKGYLLTVAVNSIPGE 181
Database: tribolium
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 114,650
Number of sequences in database: 317
Lambda K H
0.315 0.132 0.375
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 215,493
Number of Sequences: 317
Number of extensions: 8972
Number of successful extensions: 29
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 23
Number of HSP's gapped (non-prelim): 10
length of query: 1136
length of database: 114,650
effective HSP length: 64
effective length of query: 1072
effective length of database: 94,362
effective search space: 101156064
effective search space used: 101156064
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 48 (23.4 bits)
- SilkBase 1999-2023 -