Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002779-TA|BGIBMGA002779-PA|IPR000994|Peptidase M24,
catalytic core, IPR013953|FACT complex subunit Spt16p/Cdc68p,
IPR013719|Domain of unknown function DUF1747, eukaryote
(1136 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBP8B7.19 |spt16||FACT complex component Spt16|Schizosaccharomy... 680 0.0
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 32 0.39
SPAC27F1.09c |prp10|sap155|U2 snRNP-associated protein Sap155|Sc... 31 0.69
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 30 1.6
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 30 1.6
SPCC320.10 |srp72||signal recognition particle subunit Srp72|Sch... 30 1.6
SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces pombe... 30 2.1
SPAC27F1.06c |||FKBP-type peptidyl-prolyl cis-trans isomerase |S... 30 2.1
SPBC19F5.05c |ppp1|SPBC25D12.01c|pescadillo-family BRCT domain p... 30 2.1
SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor eIF... 29 4.9
SPAPB8E5.02c |rpn502|rpn5, rpn5-b|19S proteasome regulatory subu... 29 4.9
SPCC1235.05c |fft2||fun thirty related protein Fft2|Schizosaccha... 29 4.9
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 29 4.9
SPAC1420.03 |rpn501|rpn5-a, rpn5|19S proteasome regulatory subun... 29 4.9
SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces... 28 6.4
SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomy... 28 6.4
SPAC56F8.09 |rrp8||rRNA methyltransferase Rrp8 |Schizosaccharomy... 28 6.4
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 28 8.5
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 28 8.5
SPBC409.12c |||nuclear telomere cap complex subunit Stn1|Schizos... 28 8.5
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 28 8.5
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 28 8.5
>SPBP8B7.19 |spt16||FACT complex component Spt16|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1019
Score = 680 bits (1681), Expect = 0.0
Identities = 369/955 (38%), Positives = 566/955 (59%), Gaps = 50/955 (5%)
Query: 1 MSNISLDKETFYRRMKKLYATWKAVASDPKSDDALSKVDCLVSCVGVDEETL-YSKSTSL 59
M+ +D+ TF++R+ L +WK ++ D ++ VG ++T Y KST+L
Sbjct: 1 MAEYEIDEITFHKRLGILLTSWK---NEEDGKTLFQDCDSILVTVGAHDDTNPYQKSTAL 57
Query: 60 QTWLFGYELPDTITVLTEHSMCFLASKKKIEFLRQIENGKDETELPPAKLLIRDRN-DKD 118
TWL GYE P T+ +L +H + L S K L ++ K +L R ++ +++
Sbjct: 58 HTWLLGYEFPSTLILLEKHRITILTSVNKANMLTKLAETKGAAA--DVNILKRTKDAEEN 115
Query: 119 KENFNKLLQEIKKSKSGKTLGIFVKDNYPGEFCESWKAVLKGEKSEN--VDVSSAIALLM 176
K+ F K+++ I+ + K +G+F KD G+F W ++ + KSE VD S +A +
Sbjct: 116 KKLFEKIIEYIRATN--KKVGVFPKDKTQGKFINEWDSIFEPVKSEFNLVDASLGLAKCL 173
Query: 177 APKEDSEIITIKKACLVTVDVFTKYLKDQIMEIIDSDKKVKHSKLAEGVETAVSDKKY-- 234
A K++ E+ IK A V+V V +KY D++ ID KK+ HSK ++ +E+ + ++ +
Sbjct: 174 AIKDEQELANIKGASRVSVAVMSKYFVDELSTYIDQGKKITHSKFSDQMESLIDNEAFFQ 233
Query: 235 -----VTGVDTSQVDMCYPPIIQSGGHYSLKFSAVSDKNHLHFGAIVCSLGARYKSYCSN 289
+ +D Q++ CY PIIQSGG Y LK SA++D +LH ++CSLG RYKSYCSN
Sbjct: 234 TKSLKLGDIDLDQLEWCYTPIIQSGGSYDLKPSAITDDRNLHGDVVLCSLGFRYKSYCSN 293
Query: 290 IVRTLLVNPTDEVQSNYNFLLNIEEEVMKSLVAGAKLSTVYEAGLALAKKEKPNLVENLT 349
+ RT L +P E Q NY+FL+ +++++ + GA + +Y L L + ++P+L N
Sbjct: 294 VGRTYLFDPDSEQQKNYSFLVALQKKLFEYCRDGAVIGDIYTKILGLIRAKRPDLEPNFV 353
Query: 350 KSFGFAMGIEFRESSIIIGPKTNVTAKKGMVFNINIGLANLTNSNASDKEGKTYALFIGD 409
++ G +GIEFRESS+++ K + GM N++IG NL N + + + K YAL + D
Sbjct: 354 RNLGAGIGIEFRESSLLVNAKNPRVLQAGMTLNLSIGFGNLINPHPKNSQSKEYALLLID 413
Query: 410 TVLVNEEQPASLLTQSKKKVKNIGIFLXXXXXXXXXXXXXXXXILGRGKRT-AVIESKLR 468
T+ + P + T S K +I F RG T + + K R
Sbjct: 414 TIQITRSDPI-VFTDSPKAQGDISYFFGEDDSSLEDGVKPRKPPT-RGTATISSHKGKTR 471
Query: 469 TE-----HSSEEKRKEHQRELAISLNEKAKERLAKQSTGKDTEKLRKSTV----SYKSIS 519
+E S+E++R EHQ++LA + +R A+ S + + K TV SYK S
Sbjct: 472 SETRDLDDSAEKRRVEHQKQLASRKQAEGLQRFAQGSV--PSSGIEKPTVKRFESYKRDS 529
Query: 520 QMPRENEVKELKLYVDRKYETVILPIFGVPVPFHISTIKNISQSVEGDYTYLRINFFHPG 579
Q+P+ + EL++ VD + +++ILPIFG PVPFHIST+KN S++ EG++ YLR+NF PG
Sbjct: 530 QLPQA--IGELRILVDYRAQSIILPIFGRPVPFHISTLKNASKNDEGNFVYLRLNFVSPG 587
Query: 580 ATMGRNEGGNYSQPDATFVKEVTYRSTNTKEPGEISPPSSNLNTGFRLIKEVQKKFKTRE 639
G+ + + P+A F++ T+RS+N +S ++ F+ I++++K RE
Sbjct: 588 QIGGKKDELPFEDPNAQFIRSFTFRSSN----------NSRMSQVFKDIQDMKKAATKRE 637
Query: 640 AEEREKEDLVKQDTLILSQNKGNPKLKDLYIRPNIVTKRMSGSLEAHTNGFRFTS-VRGD 698
E +E D+++QD LI +NK + D+Y+RP I KR+ G +E H NG R+ S +R D
Sbjct: 638 TERKEFADVIEQDKLIEIKNKRPAHINDVYVRPAIDGKRLPGFIEIHQNGIRYQSPLRSD 697
Query: 699 K-VDILYNNIKNAFFQPCDGEMIILLHFHLKHAIMFGKKKHVDVQFYTEVGEITTD-LG- 755
+D+L++N+K+ FFQPC+GE+I+L+H HLK IM GK+K DVQFY EV +I D G
Sbjct: 698 SHIDLLFSNMKHLFFQPCEGELIVLIHVHLKAPIMVGKRKTQDVQFYREVSDIQFDETGN 757
Query: 756 -KHQHMH-DRDDLAAEQSERELRHKLKVAFKSFCERVENMTKQEVEFDTPFRELGFPGAP 813
K ++M+ D D+L EQ ER R +L FKSF E++ ++ +E D PFREL F G P
Sbjct: 758 KKRKYMYGDEDELEQEQEERRRRAQLDREFKSFAEKIAEASEGRIELDIPFRELAFNGVP 817
Query: 814 YRSTVLLQPTSGALVNLTEWPPFVIALEDVELVHFERVQFHLKNFDMVFVFKDYAKKVAM 873
+RS VLLQPT+ LV LT+ P VI L ++E+ H ERVQF LKNFD+VF+F+D+ +
Sbjct: 818 FRSNVLLQPTTDCLVQLTDTPFTVITLNEIEIAHLERVQFGLKNFDLVFIFQDFRRPPIH 877
Query: 874 VNAVPMDMLDHVKEWLNSCDIRYSEGIQSLNWTKVMKTITDDIEGFFENGGWSFL 928
+N +PM+ LD+VKEWL+SCDI + EG +LNWT +MKT+ +D FFE GGW FL
Sbjct: 878 INTIPMEQLDNVKEWLDSCDICFYEGPLNLNWTTIMKTVNEDPIAFFEEGGWGFL 932
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 32.3 bits (70), Expect = 0.39
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Query: 463 IESKLRTEHSSEEKRKEHQRELAISLNEK--AKERLAKQSTGKDTEKLR-KSTVSYKSIS 519
IES LRT++ ++ K H R LA ++K A+ + Q K+ E LR K++ I
Sbjct: 465 IES-LRTQNREIDEEKNHLRLLASKNSDKALAETNIRLQEVTKELETLRMKNSNDLNEIH 523
Query: 520 QMPRENEVKELKL 532
+ ENE LK+
Sbjct: 524 DLREENEGLTLKI 536
>SPAC27F1.09c |prp10|sap155|U2 snRNP-associated protein
Sap155|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1188
Score = 31.5 bits (68), Expect = 0.69
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 227 TAVSDKKYVTGVDTSQVDMCYPPIIQSGGHYSLKFSAVSDKNHLH-FGAIVCSLGARYKS 285
TA + K + + S++D ++ G ++ + +V +K L F +V +LG R K
Sbjct: 752 TAETVDKVIGSLGVSEIDERLEELLLDGVLFAFQEQSVEEKVILTCFSTVVNALGTRCKP 811
Query: 286 YCSNIVRTLL 295
Y IV T+L
Sbjct: 812 YLPQIVSTIL 821
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 466 KLRTEHSSEEKRKEHQRELAISLNEKAKERLAKQSTGKDTEKLRKSTVSYKSISQ-MPRE 524
K+R + +K+K+ + + ERLA+Q+ K E R+ K Q + RE
Sbjct: 590 KIREKEKKRDKKKQLKLAKEEERQRREAERLAEQAAQKALEAKRQEEARKKREEQRLKRE 649
Query: 525 NEVKELKLYVDRKYE 539
E K+ +L ++ E
Sbjct: 650 QEKKQQELERQKREE 664
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Query: 466 KLRTEHSSEEKRKEHQRELAISLNEKAKERLAKQSTGKDTEKLRKSTVSYKSISQMPREN 525
++R + E++R++ +RE L +K ++ K STG+DT L S VS + P EN
Sbjct: 174 EVRVKTKKEKEREKKERE---KLRKKQQQAKKKGSTGEDT--LASSEVSSEVDISTPAEN 228
Query: 526 E 526
+
Sbjct: 229 D 229
>SPCC320.10 |srp72||signal recognition particle subunit
Srp72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 561
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/52 (34%), Positives = 26/52 (50%)
Query: 283 YKSYCSNIVRTLLVNPTDEVQSNYNFLLNIEEEVMKSLVAGAKLSTVYEAGL 334
+KS NIV LL+ N+ L+I +++ SL A LS +Y GL
Sbjct: 320 FKSDSDNIVVALLLMQHKISNGNFRGALSIYQKLRTSLEASQSLSVLYSPGL 371
>SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1465
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/40 (35%), Positives = 24/40 (60%)
Query: 478 KEHQRELAISLNEKAKERLAKQSTGKDTEKLRKSTVSYKS 517
K + L +S N + K++L++ + KDT+ L + T SY S
Sbjct: 785 KGNYEHLFVSTNSELKQQLSEFNDEKDTQPLPEHTTSYPS 824
>SPAC27F1.06c |||FKBP-type peptidyl-prolyl cis-trans isomerase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 362
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 462 VIESKLRTEHSSEEKRKEHQRELAISLNEKAKERLAKQSTGKDTEKLRKSTVSY 515
V E + + EEK K+ +++ S+N K K + G+ TEK KST +Y
Sbjct: 199 VAEKHSKDKLKKEEKEKKTAVDVSDSVNGK-KRKTEPAGEGEQTEKKSKSTKTY 251
>SPBC19F5.05c |ppp1|SPBC25D12.01c|pescadillo-family BRCT domain
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 607
Score = 29.9 bits (64), Expect = 2.1
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Query: 473 SEEKRKEHQRELAISLNEKAKERLAKQS--TGKDTEKLRKSTVSYKSISQMPRENEVKEL 530
+EE+ EHQREL A KQ+ + K T+K ++ T++ ++ E E KEL
Sbjct: 505 AEEEDLEHQRELEAEAGGVAYSEYVKQNSKSAKKTKKRQRDTLT----AEEKEEKEAKEL 560
Query: 531 -KLYVDRK 537
K+ + K
Sbjct: 561 SKMMMSNK 568
>SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor
eIF3c|Schizosaccharomyces pombe|chr 1|||Manual
Length = 918
Score = 28.7 bits (61), Expect = 4.9
Identities = 17/60 (28%), Positives = 30/60 (50%)
Query: 470 EHSSEEKRKEHQRELAISLNEKAKERLAKQSTGKDTEKLRKSTVSYKSISQMPRENEVKE 529
E SEE E ++ A++ +E ++ ++TE S VS +S S+ E+E +E
Sbjct: 59 ESESEESEVEVPKKKAVAASEDSESDSESSEEEEETESEEDSEVSDESESESESESESEE 118
>SPAPB8E5.02c |rpn502|rpn5, rpn5-b|19S proteasome regulatory subunit
Rpn502|Schizosaccharomyces pombe|chr 1|||Manual
Length = 443
Score = 28.7 bits (61), Expect = 4.9
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 7/82 (8%)
Query: 67 ELPDTITVLTEHSMCFLAS----KKKI---EFLRQIENGKDETELPPAKLLIRDRNDKDK 119
+L ++T L +H M +L K KI E LR I +GK E+ A+L K++
Sbjct: 84 QLKQSMTSLVQHVMTYLPGIDDLKTKINLIETLRTITDGKIYVEVERARLTQLLSQIKEE 143
Query: 120 ENFNKLLQEIKKSKSGKTLGIF 141
+ K QEI ++ +T G F
Sbjct: 144 QGDIKSAQEILCNEPVETYGSF 165
>SPCC1235.05c |fft2||fun thirty related protein
Fft2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1284
Score = 28.7 bits (61), Expect = 4.9
Identities = 26/110 (23%), Positives = 42/110 (38%), Gaps = 7/110 (6%)
Query: 583 GRNEGGNYSQPDATFVKEVTYRSTNTKEPGEISPPSSNLNTGF-----RLIKEVQKKFKT 637
G G + + K+ TNT P E S P+S T + + + K +T
Sbjct: 1105 GNESDGEFKVSSSNNSKQTDAEETNTGVPLEGSQPNSVEKTDLADGDEKANIKTEMKSET 1164
Query: 638 REAEEREKEDLVKQDTLILSQNKGNPKLKDLYIRPNIVTKRMSGSLEAHT 687
E + +E + +K + + N P K PN +SG L+ T
Sbjct: 1165 VEGDNKELRETMKGENVQTDSNAAVPSSKSSTEEPN--ESVLSGHLDLDT 1212
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 28.7 bits (61), Expect = 4.9
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 459 RTAVIESKLRTEHSSEEKRKEHQRELAISLNEKAKERLAKQSTGKDTEKLR 509
R+ +++ R E EEK +ELA L + +E+ + S KD EK+R
Sbjct: 1009 RSELLDLNKRVEVLKEEKESS-SKELAKQLEDAVREKDSALSFKKDYEKIR 1058
>SPAC1420.03 |rpn501|rpn5-a, rpn5|19S proteasome regulatory subunit
Rpn501|Schizosaccharomyces pombe|chr 1|||Manual
Length = 443
Score = 28.7 bits (61), Expect = 4.9
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 7/82 (8%)
Query: 67 ELPDTITVLTEHSMCFLAS----KKKI---EFLRQIENGKDETELPPAKLLIRDRNDKDK 119
+L ++T L +H M +L K KI E LR I +GK E+ A+L K++
Sbjct: 84 QLKQSMTSLVQHVMTYLPGIDDLKTKINLIETLRTITDGKIYVEVERARLTQLLSQIKEE 143
Query: 120 ENFNKLLQEIKKSKSGKTLGIF 141
+ K QEI ++ +T G F
Sbjct: 144 QGDIKSAQEILCNEPVETYGSF 165
>SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 451
Score = 28.3 bits (60), Expect = 6.4
Identities = 29/143 (20%), Positives = 57/143 (39%), Gaps = 5/143 (3%)
Query: 249 PIIQSGGHYSLKFSAVSDKNHLHFGAIVCSLGARYKSYCSNIVRTLLVNP---TDEVQSN 305
PI+ G ++ S++ ++ +G Y S+ RT+L + T+ ++
Sbjct: 276 PIVLFGERAAMPHGGPSNRRLKKSEFVLMDVGTTLFGYHSDCTRTVLPHGQKMTERMEKL 335
Query: 306 YNFLLNIEEEVMKSLVAGAKLSTVYEAGLALAKKEKP-NLVENLTKSFGFAMGIEFRESS 364
+N + + + ++ L + S E LA K K E G +G+E E +
Sbjct: 336 WNLVYDAQTAGIQMLSHLSNTSCA-EVDLAARKVIKDAGYGEYFIHRLGHGLGLEEHEQT 394
Query: 365 IIIGPKTNVTAKKGMVFNINIGL 387
+ +KG VF + G+
Sbjct: 395 YLNPANKGTPVQKGNVFTVEPGI 417
>SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 606
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/50 (28%), Positives = 26/50 (52%)
Query: 610 EPGEISPPSSNLNTGFRLIKEVQKKFKTREAEEREKEDLVKQDTLILSQN 659
EP +++ P+ N + KEV++K TR + + K++ +K S N
Sbjct: 504 EPKKLARPAKIKNEAWSKQKEVKEKRNTRREKRKSKKEFLKAQKNEASNN 553
>SPAC56F8.09 |rrp8||rRNA methyltransferase Rrp8 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 318
Score = 28.3 bits (60), Expect = 6.4
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 470 EHSSEEKRKEHQRELAISLNEKAKERLAKQSTGKDTEKLRKSTV-SYKSISQMPREN--E 526
E E+KRK+ +R+ EK E++ K++ T KS + KS+ + +N +
Sbjct: 21 ESRKEKKRKKGERKNVGDKGEKLNEKVLKKAKSVTTNNSLKSEIKKEKSVPSIKEKNKGD 80
Query: 527 VKELKL 532
K KL
Sbjct: 81 AKHTKL 86
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 453 ILGRGKRTAVIESKLRTEHSSEEKRKEHQRELAISLNEKAKERLAKQS 500
I+G K +IE ++ +S++ E + L + L+EKAK +K S
Sbjct: 295 IIGTSKYKPIIEENMQELSNSDDICAEKESRLKLVLSEKAKLEDSKNS 342
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 27.9 bits (59), Expect = 8.5
Identities = 17/79 (21%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Query: 198 FTKYLKDQIMEIIDSDKKVKHSKLAEGVETAVSDKKYVTGV------DTSQVDMCYPPII 251
F + D+I ++++ H +++ SDKK + G+ +T++ ++
Sbjct: 190 FAEIYNDRIFDLLEKASFFGHRHALSLKKSSTSDKKSIAGIQKVFVSNTTEAYKLIQKVL 249
Query: 252 QSGGHYSLKFSAVSDKNHL 270
Q S K ++VS ++HL
Sbjct: 250 QLRKSTSTKSNSVSSRSHL 268
>SPBC409.12c |||nuclear telomere cap complex subunit
Stn1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 325
Score = 27.9 bits (59), Expect = 8.5
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 706 NIKNAFFQPCDGEMIILLHFHLKHAIMFGK 735
N++N + CDG I+ L+F L+ + G+
Sbjct: 212 NVENEIVENCDGNHILALNFSLQTLLQHGR 241
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 27.9 bits (59), Expect = 8.5
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 15/76 (19%)
Query: 463 IESKLRTE-------HSSEEKRKEHQRELAISLNEKAKERLAKQSTGKDTEKLRKSTVSY 515
+ES+L+TE +S E+ K H +E+ +SLN + ST D +L+ VS
Sbjct: 1277 LESQLQTEKAAVKKLENSNEEYKRHNQEILLSLN-------SSTSTSSDASRLKNELVSK 1329
Query: 516 KSISQMPRENEVKELK 531
+++ + E+ LK
Sbjct: 1330 ENLIE-ELNQEIGHLK 1344
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 605 STNTKEPGEISPPSSNLNTGFRLIKEVQKKFKTREAEEREKED 647
ST T P +PPS+NL Q+K K +++E +++D
Sbjct: 529 STKTSNPPVEAPPSNNLMDALASALN-QRKTKVAQSDEEDEDD 570
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.315 0.132 0.375
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,397,839
Number of Sequences: 5004
Number of extensions: 187193
Number of successful extensions: 678
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 646
Number of HSP's gapped (non-prelim): 40
length of query: 1136
length of database: 2,362,478
effective HSP length: 81
effective length of query: 1055
effective length of database: 1,957,154
effective search space: 2064797470
effective search space used: 2064797470
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 59 (27.9 bits)
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