Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002779-TA|BGIBMGA002779-PA|IPR000994|Peptidase M24,
catalytic core, IPR013953|FACT complex subunit Spt16p/Cdc68p,
IPR013719|Domain of unknown function DUF1747, eukaryote
(1136 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0357 + 14852584-14853058,14853116-14855754 564 e-160
12_02_0189 + 15165485-15168694 469 e-132
08_02_0610 + 19307537-19308011,19308187-19310846 412 e-115
02_01_0297 + 1986422-1986570,1986960-1987065,1987188-1987464,198... 35 0.32
01_01_1018 - 8046819-8046876,8046995-8047212,8048099-8048177,804... 34 0.57
08_02_0672 - 19904353-19904839,19905646-19905704,19906137-199063... 34 0.75
03_06_0670 + 35434203-35434355,35436601-35436729,35436978-354384... 33 1.3
01_06_1468 + 37574124-37574180,37574275-37574346,37574437-375745... 33 1.3
06_03_0287 - 19168685-19168735,19168847-19168884,19169517-191697... 33 1.7
04_04_0076 + 22558105-22558261,22558356-22558405,22559837-225600... 32 2.3
06_03_0998 - 26742608-26742802,26743137-26743325,26743600-267436... 32 3.0
04_01_0283 + 3768732-3768792,3769235-3769876,3769907-3770076,377... 32 3.0
04_04_0971 + 29801060-29801165,29801283-29801443,29801532-298016... 31 4.0
01_01_0568 - 4207812-4209587,4210056-4210291,4210647-4210793,421... 31 5.3
01_06_1572 + 38319544-38319849,38320427-38320513,38320584-383206... 31 7.0
01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132 31 7.0
12_02_0953 - 24736642-24736673,24737104-24737188,24737267-247373... 30 9.2
08_02_1534 + 27679176-27679778,27680214-27680342 30 9.2
05_01_0458 + 3630218-3630274,3630383-3630507,3630635-3630710,363... 30 9.2
03_02_0649 - 10162202-10162366,10162455-10162533,10162614-101626... 30 9.2
02_05_0500 - 29538409-29539283,29540306-29541641 30 9.2
02_01_0361 - 2600398-2602780,2602815-2603479,2603553-2603981 30 9.2
02_01_0353 + 2545982-2549833 30 9.2
>04_03_0357 + 14852584-14853058,14853116-14855754
Length = 1037
Score = 564 bits (1393), Expect = e-160
Identities = 329/944 (34%), Positives = 525/944 (55%), Gaps = 62/944 (6%)
Query: 5 SLDKETFYRRMKKLYATWKAVASDP-KSDDALSKVDCLVSCVGVDEETLYSKSTSLQTWL 63
+++ + F +R+K Y WK SD S +A++ ++ E+ Y KS++L WL
Sbjct: 18 TINLDNFSKRLKVFYDHWKEHNSDLWGSSNAIA-----IATPPPSEDLRYLKSSALDVWL 72
Query: 64 FGYELPDTITVLTEHSMCFLASKKKIEFLRQIENGKDETELPPAKLLIRDRNDKDKENFN 123
GYE P+TI V + FL S+KK + ++ ++ L ++ +ND
Sbjct: 73 LGYEFPETIIVFMHKQIHFLCSQKKANLIGTLKKAANDAVGADIVLHVKAKNDSGVG--- 129
Query: 124 KLLQEIKKSKSGKTLGIFVKDNYPGEFCESWKAVLKGEKSENVDVSSAIALLMAPKEDSE 183
L+++I ++ ++ D G + E E D+++ + L A K+ SE
Sbjct: 130 -LMEDIVRAVCAQSKS---DDPIVGHIAK--------EAPE--DITNGFSELFAMKDTSE 175
Query: 184 IITIKKACLVTVDVFTKYLKDQIMEIIDSDKKVKHSKLAEGVETAVSDK-KYVTGVDTSQ 242
I +KKA +T V ++ ++ ++ID ++KV HS L + E A+ D K +
Sbjct: 176 ITCVKKASYLTSSVMKNFVVPKLEKVIDEERKVTHSSLMDETEKAILDPLKVKVKLKAEN 235
Query: 243 VDMCYPPIIQSGGHYSLKFSAVSDKNHLHFGA---IVCSLGARYKSYCSNIVRTLLVNPT 299
VD+CYPP+ QSGG + LK A S+ ++L++ + I+C++GARY +YCSN+ RT L++ T
Sbjct: 236 VDICYPPVFQSGGKFDLKPGASSNDDYLYYDSASVIICAIGARYGNYCSNMARTFLIDAT 295
Query: 300 DEVQSNYNFLLNIEEEVMKSLVAGAKLSTVYEAGLALAKKEKPNLVENLTKSFGFAMGIE 359
Y L+ E +++L G ++S VY+A + + +K P L+ NLTKS G +G+E
Sbjct: 296 PTQIKAYETLMKAHEAALEALKPGNRMSAVYQAAVDVIEKNAPELLRNLTKSAGTGIGLE 355
Query: 360 FRESSIIIGPKTNVTAKKGMVFNINIGLANLTNSNASDKEGKTYALFIGDTVLVNEEQPA 419
FRES + + PK + K GMVFN+++GL NL S+K K Y+L + DT LV E
Sbjct: 356 FRESGLNLNPKNDRIIKAGMVFNVSLGLHNLQAEKKSEKT-KQYSLLLADTCLVPLE--- 411
Query: 420 SLLTQSKKKVKNIGIFLXXXXXXXXXXXXXXXXILGRGKRTAVIESKLRTEHSSEEKRKE 479
+L K VK++ A + S E S EE R++
Sbjct: 412 NLTASCSKLVKDVAYSFNDEDEVLPVKKVEVNAKEALPPTKATLRSD-NQEMSKEELRRQ 470
Query: 480 HQRELAISLNEKAKERLAKQSTG----KDTEKLRKSTVSYKSISQMPRENEVKELKLYVD 535
HQ ELA NE+ RLA +G + + V+YK+++ +P +EL + VD
Sbjct: 471 HQAELARQKNEETARRLAGVGSGSGDGRGPSRSSNELVAYKNVNDVPY---ARELVIQVD 527
Query: 536 RKYETVILPIFGVPVPFHISTIKNISQSVEGDYTYLRINFFHPGATMGRNEGGNYSQPDA 595
+K E V+LPI+G VPFH+ST+K+++ + +RI F PG M + N A
Sbjct: 528 QKNEAVLLPIYGSMVPFHVSTVKSVTSHQDNRTCTIRIFFNVPG--MPFSNDSNLKSQGA 585
Query: 596 TFVKEVTYRSTNTKEPGEISPPSSNLNTGFRLIKEVQKKFKTREAEEREKEDLVKQDTLI 655
++KE+T+RS + + E+ + IK ++++ +RE+E E+ LV Q+ L
Sbjct: 586 IYLKEITFRSKDPRHSSEV----------VQQIKTLRRQVASRESERAERATLVTQEKLQ 635
Query: 656 LSQNKGNP-KLKDLYIRPNIVTK--RMSGSLEAHTNGFRFTSVRGD-KVDILYNNIKNAF 711
L+ N+ P +L D++IRP + +++G+LE+H NGFR+++ R D +VDI+Y N+K+AF
Sbjct: 636 LTSNRNKPVRLSDVWIRPAFGGRGRKLTGTLESHVNGFRYSTSRADERVDIMYGNVKHAF 695
Query: 712 FQPCDGEMIILLHFHLKHAIMFGKKKHVDVQFYTEVGEITTDLGKHQHMH-DRDDLAAEQ 770
FQP + EMI LLHFHL + IM G KK DVQFY EV ++ LG ++ D D++ EQ
Sbjct: 696 FQPAEKEMITLLHFHLHNHIMVGNKKTKDVQFYVEVMDVVQTLGGNRRSALDPDEIEEEQ 755
Query: 771 SERELRHKLKVAFKSFCERVENMTKQ------EVEFDTPFRELGFPGAPYRSTVLLQPTS 824
ER+ ++++ + F++F +V + Q ++EFD P RELGF G PY+++ + PTS
Sbjct: 756 RERDRKNRINMDFQNFVNKVNDHWSQPQFKGLDLEFDVPLRELGFHGVPYKASAFIIPTS 815
Query: 825 GALVNLTEWPPFVIALEDVELVHFERVQFHLKNFDMVFVFKDYAKKVAMVNAVPMDMLDH 884
LV L E P V+ L ++E+V+ ERV F KNFDM VFKD+ K V ++++P LD
Sbjct: 816 TCLVELIETPFLVVTLSEIEIVNLERVGFGTKNFDMAIVFKDFKKDVLRIDSIPSTSLDA 875
Query: 885 VKEWLNSCDIRYSEGIQSLNWTKVMKTITDDIEGFFENGGWSFL 928
+KEWL++ D++Y E +LNW ++KTI DD + F ++GGW FL
Sbjct: 876 IKEWLDTTDLKYYESRLNLNWRPILKTIIDDPQKFIDDGGWEFL 919
>12_02_0189 + 15165485-15168694
Length = 1069
Score = 469 bits (1157), Expect = e-132
Identities = 299/959 (31%), Positives = 494/959 (51%), Gaps = 57/959 (5%)
Query: 2 SNISLDKETFYRRMKKLYATWKAVASDPKSDDALSKVDCLVSCVGVDEETLYSKSTSLQT 61
S+I++ E F + +KK Y WK S+ S ++ ++ Y KS +L
Sbjct: 18 SSIAVSPENFIKCLKKFYHHWKEDGSNLWG----SSTAIAIATPPPSDDIRYKKSLALSM 73
Query: 62 WLFGYELPDTITVLTEHSMCFLASKKKIEFLRQIENGKDETELPPAKLLIRDRNDKDKEN 121
W F ELP+TI V TE + L +K + L+ ++ + L + D
Sbjct: 74 WFFNRELPETIMVFTEKQIHVLCKQKGCDALKPLKMPVSKAVSIEIVLHNLAKGDNGSSL 133
Query: 122 FNKLLQEIKKSKSGKT--LGIFVKDNYPGEFCESWKAVLKGEKSENVDVSSAIALLMAPK 179
+++L + K+ +G ++ G+ E W L G + DVSS I+ L++ K
Sbjct: 134 MDEILHAVCSHFESKSAVIGHLAREKPEGKILEVWSEKLNGSRLRLSDVSSGISDLLSVK 193
Query: 180 EDSEIITIKKACLVTVDVFTKYLKDQIMEIIDSDKKVKHSKLAEGVETAV-SDKKYVTGV 238
+ +EI+ +KKA +T V KY+ ++ +II + KV+HSKL + +E + S K +
Sbjct: 194 DATEIMYVKKAAYLTASVMKKYVVPKLEKIIADEMKVQHSKLTDLMEKILLSPTKIDVKL 253
Query: 239 DTSQVDMCYPPIIQSGGHYSLKFSAVSDKNHLHFGA---IVCSLGARYKSYCSNIVRTLL 295
VD+CYPPI QSG Y L+ +A S+ ++L++ + IVC++GA+Y +YCSN+ RT L
Sbjct: 254 KAENVDICYPPIFQSGSKYDLRPAAASNNDNLYYDSGSLIVCAMGAKYSNYCSNVARTFL 313
Query: 296 VNPTDEVQSNYNFLLNIEEEVMKSLVAGAKLSTVYEAGLALAKKEKPNLVENLTKSFGFA 355
++ E + Y L + + +LV G+K S Y+A ++L + + P+L+ TKS G
Sbjct: 314 IDCAGEKCNAYKVLCQAHDAAIAALVPGSKASDGYQAAVSLVRDKAPDLLPFFTKSAGTG 373
Query: 356 MGIEFRESSIIIGPKTNVTAKKGMVFNINIGLANLTNSNASDKEGKTYALFIGDTVLVNE 415
+GIEFRE+ + + K + K+GMVFN+++G NL D + K ++L + D+VLV +
Sbjct: 374 IGIEFRETWLSLNEKNDRILKEGMVFNVSLGFQNLPEKTG-DYKNKEFSLLLADSVLVCK 432
Query: 416 EQPASLLTQSKKKVKNIGI-FLXXXXXXXXXXXXXXXXILGRGKRTAVIESKLRTEHS-- 472
E+P L K ++ F ++ K E L + +
Sbjct: 433 EKPHVLTAFVSKADGDVFYSFDEEKTGSPSVKPSLNAKVMVPEKPVPKAELMLPLKENLR 492
Query: 473 --SEEKRKEHQRELAISLNEKAKERLAKQSTGKDTEKLR-------KSTVSYKSISQMPR 523
S +++ +++L + +K +A S + + L + V+YKS +P
Sbjct: 493 SHSRTPKEDLRKQLQAEILQKRTAEIAMNSNASNHKLLEGQGLRAMREPVAYKSTRDIPC 552
Query: 524 ENEVKELKLYVDRKYETVILPIFGVPVPFHISTIKNISQSVEGDYT---YLRINFFHPGA 580
N L++ VD++ E ++LPI+GV VPFH+ T+K + GD Y+ I F PG
Sbjct: 553 SNR---LEIQVDKQNEAILLPIYGVIVPFHVCTVKKAE--IRGDSNRGVYVCITFNVPGT 607
Query: 581 TMGRNEGGNYSQPDATFVKEVTYRSTNTKEPGEISPPSSNLNTGFRLIKEVQKKFKTREA 640
+ + + F+K VT+ S + K E +L++ +Q+
Sbjct: 608 ASNLQDPCLKTNANRIFLKAVTFISKDRKHADE----------AIQLMRIIQRGV----L 653
Query: 641 EEREKEDLVKQDTLILSQN--KGNPKLKDLYIRPNIVTK--RMSGSLEAHTNGFRFTSVR 696
E ++ LV Q+ L L + +L DL+IRP + + G L H NGF++++ +
Sbjct: 654 ERAKRASLVSQERLQLCDRMTRDRIQLMDLWIRPTFAGRGRKSPGILVLHVNGFQYSASK 713
Query: 697 GDKVDILYNNIKNAFFQPCDGEMIILLHFHLKHAIMFGKKKHVDVQFYTEVGEITTDLG- 755
+K++I++ N+K+AFFQP + EMI LLHFHL + IM G KK DVQFY EV + +G
Sbjct: 714 SEKIEIMFCNVKHAFFQPAEKEMITLLHFHLYNDIMVGNKKTRDVQFYIEVMDTVDSVGL 773
Query: 756 KHQHMHDRDDLAAEQSERELRHKLKVAFKSFCERVENMTKQE------VEFDTPFRELGF 809
+ + D D++ EQ ER R + F+ F +RV ++ Q ++F+TP ++LGF
Sbjct: 774 RRRTAWDPDEIEEEQRERARRSGINRQFELFVKRVNSIWSQPRFEQLGLQFETPSQKLGF 833
Query: 810 PGAPYRSTVLLQPTSGALVNLTEWPPFVIALEDVELVHFERVQFHLKNFDMVFVFKDYAK 869
G R+T + PT LV L E P V +L +V++V ERV K+FDMVFVF+D +
Sbjct: 834 NGVHGRTTCFIVPTPSCLVQLVESPFLVTSLREVDIVCLERVALGQKSFDMVFVFQDLKR 893
Query: 870 KVAMVNAVPMDMLDHVKEWLNSCDIRYSEGIQSLNWTKVMKTITDDIEGFFENGGWSFL 928
V + +PM +D +K+WLN C+++Y E +L+W KV+K + ++ E EN W FL
Sbjct: 894 DVIRIEVIPMTSIDGIKDWLNGCNLKYYESKLNLSWRKVLKEVMNNKES-DENNRWEFL 951
>08_02_0610 + 19307537-19308011,19308187-19310846
Length = 1044
Score = 412 bits (1014), Expect = e-115
Identities = 251/713 (35%), Positives = 391/713 (54%), Gaps = 49/713 (6%)
Query: 151 CESWKAVLKG--EKSENVDVSSAIALLMAPKEDSEI----ITIKKACLVTV--DVFTKYL 202
C KA L G +K+ N V + I L + K DS + ++ C + D ++
Sbjct: 93 CSQKKANLIGTLKKASNDAVGADIVLHVKAKNDSGVGLMEDIVRAVCAQSKSDDPIVGHI 152
Query: 203 KDQIME--IIDSDKKVKHSKLAEGVETAVSDK-KYVTGVDTSQVDMCYPPIIQSGGHYSL 259
+ E +ID ++KV HS L + E A+ D K + VD+CYPP+ QSGG + L
Sbjct: 153 AKEAPEEKVIDEERKVTHSSLMDETEKAILDPLKVKVKLKAENVDICYPPVFQSGGKFDL 212
Query: 260 KFSAVSDKNHLHFGA---IVCSLGARYKSYCSNIVRTLLVNPTDEVQSNYNFLLNIEEEV 316
K A S+ ++L++ + I+C++GARY +YCSN+ RT L++ T Y L+ E
Sbjct: 213 KPGASSNDDYLYYDSASVIICAIGARYGNYCSNMARTFLIDATPAQSKAYETLMKAHEAA 272
Query: 317 MKSLVAGAKLSTVYEAGLALAKKEKPNLVENLTKSFGFAMGIEFRESSIIIGPKTNVTAK 376
+++L G ++S VY+A + + +K P L+ NLTKS G +G+EFRES + + PK + K
Sbjct: 273 LEALKPGNRMSAVYQAAVDVIEKNAPELLPNLTKSAGTGIGLEFRESGLNLNPKNDRIIK 332
Query: 377 KGMVFNINIGLANLTNSNASDKEGKTYALFIGDTVLVNEEQPASLLTQSKKKVKNIGIFL 436
GMVFN+++GL NL S+K K Y+L + DT LV E +L K +K++
Sbjct: 333 AGMVFNVSLGLLNLQAETKSEKT-KQYSLLLADTCLVPLE---NLTASCSKLLKDVAYSF 388
Query: 437 XXXXXXXXXXXXXXXXILGRGKRTAVIESKLRTEHSSEEKRKEHQRELAISLNEKAKERL 496
A + S E S EE R++HQ ELA NE+ RL
Sbjct: 389 NDEDEVLPVKKVEVNAKEALPPTKATLRSD-NQEMSKEELRRQHQAELARQKNEETARRL 447
Query: 497 A----KQSTGKDTEKLRKSTVSYKSISQMPRENEVKELKLYVDRKYETVILPIFGVPVPF 552
A G+ + V+YK+++ +P +EL + VD+K E V+LPI G VPF
Sbjct: 448 AGVGSGSGDGRGPSRSSNELVAYKNVNDVP---YARELVIQVDQKNEAVLLPIHGSMVPF 504
Query: 553 HISTIKNISQSVEGDYTYLRINFFHPGATMGRNEGGNYSQPDATFVKEVTYRSTNTKEPG 612
H+ST+K+++ + +RI F PG M + N A ++KE+T+RS + +
Sbjct: 505 HVSTVKSVTSHQDNRTCTIRIFFNVPG--MPFSNDSNLKSQGAIYLKEITFRSKDPRHSS 562
Query: 613 EISPPSSNLNTGFRLIKEVQKKFKTREAEEREKEDLVKQDTLILSQNKGNP-KLKDLYIR 671
E+ P IK ++++ +RE+E E+ LV Q+ L L+ N+ P +L D++IR
Sbjct: 563 EVVPQ----------IKTLRRQVASRESERAERATLVTQEKLQLASNRNKPVRLSDVWIR 612
Query: 672 PNI--VTKRMSGSLEAHTNGFRFTSVRGD-KVDILYNNIKNAFFQPCDGEMIILLHFHLK 728
P ++++G+LE+H NGFR+++ R D +VDI+Y N+K+AFFQP + E+I LLHFHL
Sbjct: 613 PAFGGRGRKLTGTLESHVNGFRYSTSRADERVDIMYGNVKHAFFQPAEKEIITLLHFHLH 672
Query: 729 HAIMFGKKKHVDVQFYTEVGEITTDLGKHQHMH-DRDDLAAEQSERELRHKLKVAFKSFC 787
+ IM G KK DVQFY EV ++ LG ++ D D++ EQ ER+ ++++ + F++F
Sbjct: 673 NHIMVGNKKTKDVQFYVEVMDVVQTLGGNRRSALDPDEIEEEQRERDRKNRINMDFQNFV 732
Query: 788 ERVENMTKQ------EVEFDTPFRELGFPGAPYRSTVLLQPTSGALVNLTEWP 834
+V + Q ++EFD P RELGF G PY+++ + PTS LV L E P
Sbjct: 733 NKVNDHWSQPQFKGLDLEFDVPLRELGFHGVPYKASAFIIPTSTCLVELIETP 785
Score = 55.2 bits (127), Expect = 3e-07
Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 6/113 (5%)
Query: 5 SLDKETFYRRMKKLYATWKAVASDP-KSDDALSKVDCLVSCVGVDEETLYSKSTSLQTWL 63
+++ + F +R+K Y WK SD S +A++ ++ E+ Y KS++L WL
Sbjct: 18 TINLDNFSKRLKVFYDHWKEHNSDLWGSSNAIA-----IATPPPSEDLRYLKSSALDVWL 72
Query: 64 FGYELPDTITVLTEHSMCFLASKKKIEFLRQIENGKDETELPPAKLLIRDRND 116
GYE P+TI V + FL S+KK + ++ ++ L ++ +ND
Sbjct: 73 LGYEFPETIIVFMHKQIHFLCSQKKANLIGTLKKASNDAVGADIVLHVKAKND 125
>02_01_0297 + 1986422-1986570,1986960-1987065,1987188-1987464,
1987805-1988305,1989010-1990016,1990131-1990781,
1991337-1991633,1991735-1992013,1993070-1993198,
1993291-1993491,1993651-1993793,1993878-1994190,
1994349-1994488,1995320-1995398,1995484-1995753,
1996208-1996425,1996521-1996632
Length = 1623
Score = 35.1 bits (77), Expect = 0.32
Identities = 37/98 (37%), Positives = 51/98 (52%), Gaps = 12/98 (12%)
Query: 73 TVLTEHSMCFLASKKKIEFL-RQIENGKDETELPPAK-LLIRDRNDKDKENFNKLLQEIK 130
TVL++H L + K E R + K E+P A+ L++R + DK KL E+K
Sbjct: 1058 TVLSDHIEDRLFKRLKQERQDRAAQERKSIEEVPGAEGLVVRVVSSVDK----KL--EVK 1111
Query: 131 KSKSGKTLGIFVKDNYPGEFCESWKAVLKGEKSENVDV 168
+ L IF +DNYP EF KAVL +K E V+V
Sbjct: 1112 P----RFLEIFQEDNYPTEFPYKSKAVLLFQKIEGVEV 1145
>01_01_1018 -
8046819-8046876,8046995-8047212,8048099-8048177,
8048455-8048540,8048698-8048983,8049063-8049205,
8049308-8049508,8049626-8049754,8050463-8050738,
8050823-8051098,8051364-8052364,8052452-8052634,
8052865-8052937,8053205-8053313,8053622-8053785
Length = 1093
Score = 34.3 bits (75), Expect = 0.57
Identities = 43/143 (30%), Positives = 64/143 (44%), Gaps = 15/143 (10%)
Query: 28 DPKSDDALSKVDCLVSCVGVDEETLYSKSTSLQTWLFGYELPDTITVLTEHSMCFLASKK 87
+PK D ++ C C +++ S T L ELP T L++H L+ +
Sbjct: 621 NPKIVDPEAEYTC-AKCFLKEKDNEDVDSLEPSTILGARELPRTR--LSDHIEQRLSERL 677
Query: 88 KIEFL-RQIENGKDETELPPAK-LLIRDRNDKDKENFNKLLQEIKKSKSGKTLGIFVKDN 145
E R I +GK E+P + L +R + D+ LQ + K F K+
Sbjct: 678 VQERQQRAIASGKSVDEVPGVEGLTVRVVSSADRT-----LQVQPRFKD-----FFKKEQ 727
Query: 146 YPGEFCESWKAVLKGEKSENVDV 168
YPGEF KA+L +K+E VDV
Sbjct: 728 YPGEFPYKSKAILLFQKNEGVDV 750
>08_02_0672 -
19904353-19904839,19905646-19905704,19906137-19906352,
19906845-19907422,19907506-19908180,19908263-19908653,
19909469-19909621,19909727-19909980,19911023-19911479
Length = 1089
Score = 33.9 bits (74), Expect = 0.75
Identities = 21/89 (23%), Positives = 40/89 (44%), Gaps = 4/89 (4%)
Query: 455 GRGKRTAVIESKLRTEHSSEEKRKEHQRELAISLNEKAKERLAKQSTGKDTEKLRKSTVS 514
G G + R E S +KRKE +R+ +K ER ++ + + R+ +
Sbjct: 425 GTGSDKRAVNETERIETGSPDKRKERERDKEKRDKDKELERHERERERERVRRDREKDIK 484
Query: 515 YKSISQMPREN----EVKELKLYVDRKYE 539
YK + ++ +E E +E + R++E
Sbjct: 485 YKEVERLYKERLKEWEFREREKEYQRQHE 513
>03_06_0670 +
35434203-35434355,35436601-35436729,35436978-35438409,
35438524-35439014
Length = 734
Score = 33.1 bits (72), Expect = 1.3
Identities = 13/55 (23%), Positives = 34/55 (61%)
Query: 462 VIESKLRTEHSSEEKRKEHQRELAISLNEKAKERLAKQSTGKDTEKLRKSTVSYK 516
V + +++ ++KRKE + +++AK+ +Q+ K+ +KLR+++++Y+
Sbjct: 474 VAKEDKKSDRHEKKKRKEKDKHKEKKRDKEAKKEKDEQNNNKEHDKLRENSINYQ 528
>01_06_1468 +
37574124-37574180,37574275-37574346,37574437-37574513,
37574897-37574978,37576005-37576069,37576313-37576354,
37576452-37576503,37576631-37576679,37576784-37576797,
37576942-37577049,37577129-37577272,37577421-37577810
Length = 383
Score = 33.1 bits (72), Expect = 1.3
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 690 FRFTSVRGD--KVDILYNNIKNAFFQPCDGEMIILLHFHLKHAIMFGKKKHVDVQFYTEV 747
F S+ G+ ++ IL N +A Q DG L +LK A++FGKK V+ Y V
Sbjct: 214 FNLFSMYGNIVRIKILKNKPDHALIQMADGLQAELAVLYLKGAMLFGKKLEVNYSKYPTV 273
>06_03_0287 -
19168685-19168735,19168847-19168884,19169517-19169727,
19171461-19171643,19171879-19172028,19172161-19172256,
19172378-19172464,19172535-19172741,19172823-19173047,
19173150-19173261,19173397-19173453,19175522-19176882
Length = 925
Score = 32.7 bits (71), Expect = 1.7
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 5/43 (11%)
Query: 60 QTWLFGYELPDTITVLTEHSMCFLASKKKIEFLRQIENGKDET 102
QT LF +PD + +C +A K+ +EF+ +E G +ET
Sbjct: 643 QTLLFSATVPDEV-----RQVCHIAMKRDLEFVNTVEEGSEET 680
>04_04_0076 +
22558105-22558261,22558356-22558405,22559837-22560044,
22560112-22560237,22560469-22560567,22560729-22561405,
22561483-22561731,22561808-22561936,22562021-22562089,
22562183-22562256,22563086-22563098,22563361-22563468,
22563541-22563651,22563725-22563811,22564043-22564068,
22564840-22564906,22565123-22565212,22565295-22565387,
22565515-22565604,22565699-22565761,22566349-22566447
Length = 894
Score = 32.3 bits (70), Expect = 2.3
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Query: 464 ESKLRTEHSSEEKRKEHQRELAISLN-EKAK-ERLAKQSTGKDTEKL----RKSTVSYKS 517
E L+ + + E R++++ E +N EK K E+L K+ K EK+ + S S++
Sbjct: 558 ELSLKNDQAINEIRRKYELEKVEIINIEKEKAEKLIKEMENKCNEKISENRQDSESSFEM 617
Query: 518 ISQMPRENEVKELKLYVDRKYE 539
++++ ++NE KE L K E
Sbjct: 618 VARIQQDNEHKESTLRAYHKEE 639
>06_03_0998 -
26742608-26742802,26743137-26743325,26743600-26743657,
26743990-26744056,26744368-26746504
Length = 881
Score = 31.9 bits (69), Expect = 3.0
Identities = 16/56 (28%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 197 VFTKYLKDQIMEIIDSDKKVKHSKLAEGVETAVSDKKYVTGVDTSQV--DMCYPPI 250
+ T ++D+I+ +++ D +VK KL V +A S+K G++ V + +PP+
Sbjct: 291 MLTIEVRDRILAVLERDLEVKVDKLGSSVHSAESEKMEFLGMEFQAVPPSVLHPPM 346
>04_01_0283 +
3768732-3768792,3769235-3769876,3769907-3770076,
3770134-3770511,3770602-3770991
Length = 546
Score = 31.9 bits (69), Expect = 3.0
Identities = 34/160 (21%), Positives = 72/160 (45%), Gaps = 7/160 (4%)
Query: 74 VLTEHSMCFLASKKKIEFLRQIENGKDETELPPAKLLIRDRND--KDKENFNKLLQEIKK 131
V +E+ + S+ +I++L+Q+ E + AK ++ D K+ +N + + EI+
Sbjct: 230 VESENEEKYSQSEAEIKYLKQVMGAVVEAKEAAAKAFAAEKEDIMKESDNLKRKVTEIQD 289
Query: 132 SKS-GK-TLGIFVKDNYPGEFCESWKAVLKGEKSENVDVSSAIALLMAPKED---SEIIT 186
SK G+ L + G E+ + K + E ++ + L E+ ++ +
Sbjct: 290 SKKHGQFELEVTSLKKELGALQEAKETTTKAFEVEKAEILKELEDLRRKVEEIQTNKDLV 349
Query: 187 IKKACLVTVDVFTKYLKDQIMEIIDSDKKVKHSKLAEGVE 226
+ + +DV T K I+E+ ++ K++ L E E
Sbjct: 350 EGENDKLRLDVLTAQQKQSILEVEANNLKMELGALVEAKE 389
>04_04_0971 +
29801060-29801165,29801283-29801443,29801532-29801616,
29801722-29802116
Length = 248
Score = 31.5 bits (68), Expect = 4.0
Identities = 12/40 (30%), Positives = 24/40 (60%)
Query: 458 KRTAVIESKLRTEHSSEEKRKEHQRELAISLNEKAKERLA 497
K+ ++E K+ + EK+KE +++ + + EK KE +A
Sbjct: 161 KKEIIVEEKVEVKKKEAEKKKEGEKKEEVKVKEKVKEVVA 200
>01_01_0568 -
4207812-4209587,4210056-4210291,4210647-4210793,
4211857-4212145
Length = 815
Score = 31.1 bits (67), Expect = 5.3
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 465 SKLRTEHSSEEKRKEH-QRELAISLNEKAKERLAKQSTGKDTEKLRKSTVSYKSISQMPR 523
S+L+TE S E R H + ELA++ E + R ++ K +T + +SQ P
Sbjct: 722 SRLQTEKESFEMRARHLEEELALAKGEILRLRRQISTSRSQKAKTLPNTNASPEVSQAPD 781
Query: 524 ENEVKE 529
E V +
Sbjct: 782 EQPVND 787
>01_06_1572 +
38319544-38319849,38320427-38320513,38320584-38320676,
38321491-38321567,38321974-38322562,38322701-38322794,
38322884-38322996,38323438-38323524,38323842-38323964,
38324058-38324192,38324437-38324484,38324993-38325094,
38325321-38325716
Length = 749
Score = 30.7 bits (66), Expect = 7.0
Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 3/99 (3%)
Query: 465 SKLRTEHSSE--EKRKEHQRELAISLNEKAKERLAKQSTGKDTEKLRKSTVSYKSISQMP 522
+ LRT+H K K Q E S N K+R K S+ E + + Y SI MP
Sbjct: 169 NNLRTKHDGYFVNKGKLEQIEAGTSANVAPKKRRRKDSSSGYIENNQVAPADYPSIGNMP 228
Query: 523 RENEVKELKLYVDRKYETVILPIFGVPVPFHISTIKNIS 561
++ + +V +K + + +G +KNI+
Sbjct: 229 GKSAARS-GAHVGKKLTSSNIGSYGEYYHDDNRVVKNIT 266
>01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132
Length = 5436
Score = 30.7 bits (66), Expect = 7.0
Identities = 27/112 (24%), Positives = 46/112 (41%), Gaps = 10/112 (8%)
Query: 599 KEVTYRSTNTKEPGEISPPSSNLNTGFRLIKEVQKKFKTREAEEREKEDLVKQDTLILSQ 658
+ +T + E G ++ SS + GF L+KE K K EA+ K + K+D IL
Sbjct: 3448 ENITTKDEEEMEVGHLNE-SSGIEVGF-LVKEDTNKIKLLEADSNIKSNADKKDIQILQY 3505
Query: 659 --------NKGNPKLKDLYIRPNIVTKRMSGSLEAHTNGFRFTSVRGDKVDI 702
+PK L++ ++V + S G + +K D+
Sbjct: 3506 EHTDESEFGTNDPKSDSLFVHVDMVQRDASLGTNIEECGASLEAADNEKKDM 3557
>12_02_0953 - 24736642-24736673,24737104-24737188,24737267-24737386,
24737484-24737549,24737629-24737799,24737901-24737999,
24738075-24738186,24738282-24738343,24738412-24738483,
24738583-24738681,24738764-24738997,24739104-24739178,
24739299-24739386,24739478-24739638,24739734-24739841,
24739934-24741922,24742007-24742279,24742957-24743295,
24743449-24745038,24745166-24745241,24745333-24745412,
24745614-24745679,24745761-24745830,24745899-24746134,
24746149-24746319,24746915-24747097,24747176-24747241,
24747326-24747389,24747472-24747530,24747612-24747699,
24747799-24747891,24747956-24748116,24748215-24748307,
24748405-24748518,24748654-24748773,24748852-24748935,
24749016-24749171,24749518-24750154,24752874-24752929
Length = 2815
Score = 30.3 bits (65), Expect = 9.2
Identities = 15/62 (24%), Positives = 31/62 (50%)
Query: 463 IESKLRTEHSSEEKRKEHQRELAISLNEKAKERLAKQSTGKDTEKLRKSTVSYKSISQMP 522
+E+K+ E+++ H+ E+ + L + ++ LA S+G+ T L + S+
Sbjct: 2321 LENKVDIIKEEAERQRMHREEIELELQKVRQQMLAVPSSGQATSSLEGGMGDFTDSSRHS 2380
Query: 523 RE 524
RE
Sbjct: 2381 RE 2382
>08_02_1534 + 27679176-27679778,27680214-27680342
Length = 243
Score = 30.3 bits (65), Expect = 9.2
Identities = 17/59 (28%), Positives = 27/59 (45%)
Query: 589 NYSQPDATFVKEVTYRSTNTKEPGEISPPSSNLNTGFRLIKEVQKKFKTREAEEREKED 647
N D T +K + G+ + S + +RL+K+ +K FKT + EKED
Sbjct: 88 NVMHEDFTELKAIIQDMQVALRKGDDAAVQSKTQSYYRLLKKAKKHFKTAKKVTYEKED 146
>05_01_0458 +
3630218-3630274,3630383-3630507,3630635-3630710,
3630884-3630985,3631075-3631290,3632217-3632297,
3633152-3633235,3633405-3633509,3634338-3634516,
3634681-3634765,3634889-3635090,3635165-3635234,
3635353-3635422,3635745-3635834,3636020-3636088,
3636520-3636618,3636804-3636914
Length = 606
Score = 30.3 bits (65), Expect = 9.2
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 234 YVTGVDTSQ-VDMCYPPIIQSGGHYSLKFSAVSDKNHLHFGAIVCSLGARYKSYCSNIVR 292
YVT V Q DM + +G K NH+ FG ++ S G R+++ + +VR
Sbjct: 355 YVTDVGQQQHFDMFFNAARMAGWLPDPKEKKYPKTNHVGFGLVLGSDGKRFRTRSTEVVR 414
Query: 293 TLLVNPTDEVQS 304
L+ DE +S
Sbjct: 415 --LIELLDEAKS 424
>03_02_0649 -
10162202-10162366,10162455-10162533,10162614-10162670,
10162741-10162847,10163365-10163580,10163690-10163734,
10164100-10164258,10164714-10164818,10164902-10165084,
10165490-10165546,10165625-10165720,10166970-10167104,
10167188-10167262,10167380-10167479,10167682-10167842,
10167921-10168068,10168706-10169111,10169794-10169860,
10169953-10170162,10170570-10170711,10170809-10170870,
10170965-10171037,10171876-10171985,10172087-10172227
Length = 1032
Score = 30.3 bits (65), Expect = 9.2
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
Query: 155 KAVLKGEKSENVDVSSAIALLMA-------PKEDSEIITIKKACLVTVDVFTKYLKDQIM 207
K++L + EN ++ +A L+A PKE S++ ++ L T DVFT Y +
Sbjct: 96 KSLLLNMREENGKIALQLAALIARIVYFDYPKEWSDVFSVLAQQLQTSDVFTSYQVSTV- 154
Query: 208 EIIDSDKKVKHSKLA 222
+ S KK+ +LA
Sbjct: 155 -LFRSLKKLSKKRLA 168
>02_05_0500 - 29538409-29539283,29540306-29541641
Length = 736
Score = 30.3 bits (65), Expect = 9.2
Identities = 17/71 (23%), Positives = 35/71 (49%)
Query: 495 RLAKQSTGKDTEKLRKSTVSYKSISQMPRENEVKELKLYVDRKYETVILPIFGVPVPFHI 554
R ++ G D + +T+ ++SI +PRE + +EL+ + E + L G V +
Sbjct: 339 RKRRKRIGDDPSSVFNTTIDFRSIPGVPREFDYRELRRGTNNFDEKMKLGQGGYGVVYRA 398
Query: 555 STIKNISQSVE 565
+ + Q++E
Sbjct: 399 TVVGENGQNME 409
>02_01_0361 - 2600398-2602780,2602815-2603479,2603553-2603981
Length = 1158
Score = 30.3 bits (65), Expect = 9.2
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 232 KKYVTGVDTSQVDMCYPPIIQSGGHYSLKFSAVSDKNHL--HFGAIVCSLGARYKSYCSN 289
+K V + S +D ++ G Y+ + D N + FGA+V +LG R K Y
Sbjct: 726 EKVVANLGASDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNALGQRVKPYLPQ 785
Query: 290 IVRTL 294
I T+
Sbjct: 786 ICGTI 790
>02_01_0353 + 2545982-2549833
Length = 1283
Score = 30.3 bits (65), Expect = 9.2
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 232 KKYVTGVDTSQVDMCYPPIIQSGGHYSLKFSAVSDKNHL--HFGAIVCSLGARYKSYCSN 289
+K V + S +D ++ G Y+ + D N + FGA+V +LG R K Y
Sbjct: 851 EKVVANLGASDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNALGQRVKPYLPQ 910
Query: 290 IVRTL 294
I T+
Sbjct: 911 ICGTI 915
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.315 0.132 0.375
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,393,110
Number of Sequences: 37544
Number of extensions: 1056870
Number of successful extensions: 3001
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 2951
Number of HSP's gapped (non-prelim): 35
length of query: 1136
length of database: 14,793,348
effective HSP length: 90
effective length of query: 1046
effective length of database: 11,414,388
effective search space: 11939449848
effective search space used: 11939449848
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 65 (30.3 bits)
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