Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002779-TA|BGIBMGA002779-PA|IPR000994|Peptidase M24,
catalytic core, IPR013953|FACT complex subunit Spt16p/Cdc68p,
IPR013719|Domain of unknown function DUF1747, eukaryote
(1136 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_35523| Best HMM Match : RVT_1 (HMM E-Value=0) 164 3e-40
SB_18816| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-05
SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14) 38 0.061
SB_42014| Best HMM Match : Myosin_tail_1 (HMM E-Value=0.083) 37 0.080
SB_36642| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.57
SB_35645| Best HMM Match : TAT_ubiq (HMM E-Value=3.9) 34 0.57
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.57
SB_5808| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.75
SB_45032| Best HMM Match : RVT_1 (HMM E-Value=1.6e-21) 33 1.3
SB_35188| Best HMM Match : RVT_1 (HMM E-Value=2.3e-25) 33 1.7
SB_22653| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 1.7
SB_35649| Best HMM Match : M (HMM E-Value=6e-09) 32 2.3
SB_58624| Best HMM Match : E-MAP-115 (HMM E-Value=0.24) 32 3.0
SB_35175| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 3.0
SB_27611| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 3.0
SB_41695| Best HMM Match : Spectrin (HMM E-Value=0) 31 4.0
SB_23345| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 4.0
SB_10935| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 4.0
SB_32768| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 4.0
SB_59267| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 5.3
SB_57263| Best HMM Match : SAM_1 (HMM E-Value=1.5) 31 5.3
SB_57061| Best HMM Match : Sec62 (HMM E-Value=0.27) 31 5.3
SB_56315| Best HMM Match : Collagen (HMM E-Value=0.00013) 31 5.3
SB_26233| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 5.3
SB_15350| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 5.3
SB_1307| Best HMM Match : Filament (HMM E-Value=0.13) 31 5.3
SB_36919| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 7.0
SB_24046| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 7.0
SB_56456| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 7.0
SB_40600| Best HMM Match : DUF667 (HMM E-Value=0.35) 31 7.0
SB_31025| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 7.0
SB_23024| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 7.0
SB_21715| Best HMM Match : Serglycin (HMM E-Value=0.054) 31 7.0
SB_18643| Best HMM Match : Ion_trans (HMM E-Value=0) 31 7.0
SB_59531| Best HMM Match : zf-CCHC (HMM E-Value=0.00021) 30 9.2
SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029) 30 9.2
SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 9.2
SB_10642| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 9.2
SB_9892| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0013) 30 9.2
SB_50370| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 9.2
>SB_35523| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1410
Score = 164 bits (399), Expect = 3e-40
Identities = 71/95 (74%), Positives = 82/95 (86%)
Query: 834 PPFVIALEDVELVHFERVQFHLKNFDMVFVFKDYAKKVAMVNAVPMDMLDHVKEWLNSCD 893
P F+I L++VELVHFERVQFHLKNFDMVF+FKDY +KV +NAVPM LD VKEWLNSCD
Sbjct: 1209 PSFIITLDEVELVHFERVQFHLKNFDMVFIFKDYHRKVEHINAVPMTSLDSVKEWLNSCD 1268
Query: 894 IRYSEGIQSLNWTKVMKTITDDIEGFFENGGWSFL 928
I+Y+EGIQSLNW K+MKTI ++ E F ENGGWSFL
Sbjct: 1269 IKYTEGIQSLNWAKIMKTINENPEEFLENGGWSFL 1303
Score = 148 bits (358), Expect = 3e-35
Identities = 86/173 (49%), Positives = 106/173 (61%), Gaps = 38/173 (21%)
Query: 558 KNISQSVEGDYTYLRINFFHPGATMGRNEGGNYSQPDATFVKEVTYRSTNTKEPGEISPP 617
+NIS S EG YTYLRIN + PG T +RS+NTK PG PP
Sbjct: 899 RNISSSDEGGYTYLRINLYCPGRT---------------------FRSSNTKTPGSAFPP 937
Query: 618 SSNLNTGFRLIKEVQKKFKTREAEEREKEDLVKQDTLILSQNKGNPKLKDLYIRPNIVTK 677
+ NLNT FRLIKEVQKKFKTREAEEREK+ V+Q TL+LS KGNPKLKDLYIRP+I +
Sbjct: 938 AQNLNTAFRLIKEVQKKFKTREAEEREKQGAVQQGTLLLSNTKGNPKLKDLYIRPSITQR 997
Query: 678 R--MSGSLEAH---------------TNGFRFTSVRGDKVDILYNNIKNAFFQ 713
+ ++ H GFRF++ RG+ VDI+Y N+K+A+FQ
Sbjct: 998 KTPLTPPFIYHPETTTHLLLIVPFFCVEGFRFSTFRGEHVDIIYGNVKHAYFQ 1050
Score = 136 bits (330), Expect = 7e-32
Identities = 61/131 (46%), Positives = 93/131 (70%), Gaps = 3/131 (2%)
Query: 117 KDKENFNKLLQEIKKSKSGKTLGIFVKDNYPGEFCESWKAVLKGEKSENVDVSSAIALLM 176
K K +F K LQ+ +K GK +G+F+KD + G+F + WK + E E VDVS+A+A +M
Sbjct: 90 KKKVDFLKPLQDAQKK--GKQVGVFIKDTFQGQFMDGWKTAFENESFEKVDVSNAMAFIM 147
Query: 177 APKEDSEIITIKKACLVTVDVFTKYLKDQIMEIIDSDKKVKHSKLAEGVETAVSDKKYV- 235
A +EDSE++ +KKA V+ D+F+K+ K+QIMEI+D +K+VKHSK+A+ +E A+ KKY+
Sbjct: 148 AVREDSELVNVKKAAQVSSDIFSKFFKNQIMEIVDEEKRVKHSKIADSIEGALETKKYLQ 207
Query: 236 TGVDTSQVDMC 246
G+D Q+ C
Sbjct: 208 PGMDADQISSC 218
Score = 103 bits (246), Expect = 1e-21
Identities = 46/100 (46%), Positives = 72/100 (72%), Gaps = 2/100 (2%)
Query: 2 SNISLDKETFYRRMKKLYATWKAVASDPKSDD--ALSKVDCLVSCVGVDEETLYSKSTSL 59
+ ISLDK+ F+RR+K++YA W+ K ++ A +V +V VG DE+ +YSKST+L
Sbjct: 4 AKISLDKDAFFRRIKRIYAAWQKPDGTVKEENGVAFPEVGSVVIAVGQDEDVIYSKSTAL 63
Query: 60 QTWLFGYELPDTITVLTEHSMCFLASKKKIEFLRQIENGK 99
Q WLFGYEL DT+T+L + ++ LASKKK++FL+ +++ +
Sbjct: 64 QQWLFGYELADTVTILCKSTLHVLASKKKVDFLKPLQDAQ 103
Score = 50.0 bits (114), Expect = 1e-05
Identities = 25/52 (48%), Positives = 31/52 (59%)
Query: 380 VFNINIGLANLTNSNASDKEGKTYALFIGDTVLVNEEQPASLLTQSKKKVKN 431
V NI G + L NS A D K YALFIGDT+LVNE P + ++K +N
Sbjct: 821 VKNIGAGFSGLVNSQAGDDVNKNYALFIGDTLLVNEVVPLDEEDEEEEKEEN 872
Score = 33.9 bits (74), Expect = 0.75
Identities = 17/53 (32%), Positives = 25/53 (47%)
Query: 301 EVQSNYNFLLNIEEEVMKSLVAGAKLSTVYEAGLALAKKEKPNLVENLTKSFG 353
E Q Y FL+ + + ++ L KL VY A + K KP+L K+ G
Sbjct: 773 EQQEIYTFLVAVFDVIVDKLRHDTKLCDVYNAAMQHVSKNKPDLQSKFVKNIG 825
>SB_18816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 506
Score = 49.6 bits (113), Expect = 1e-05
Identities = 46/191 (24%), Positives = 82/191 (42%), Gaps = 8/191 (4%)
Query: 245 MCYPPIIQSGGHYSLKFSAVSDKNHLHFGAIVC-SLGARYKSYCSNIVRTLLVNPT--DE 301
+ YPP++ +GG + +++ L G +V G Y Y S+I RT VN T
Sbjct: 315 LAYPPVV-AGGALANTLHYINNTQVLRDGDLVLMDSGCEYHGYASDITRTWPVNGTFTGP 373
Query: 302 VQSNYNFLLNIEEEVMKSLVAGAKLSTVYEAGLALAKKEKPNLVENLTKSFGFAMGIEFR 361
+ Y+ +L +++ + L ++ L L E VE G +G++
Sbjct: 374 QRELYDIVLEVQKTCISLCHKDITLDYLHTVMLTLLA-EGLVAVELCPHHVGHYLGMDVH 432
Query: 362 ESSIIIGPKTNVTAKKGMVFNINIGLANLTNSNASDKEGKTYALFIGDTVLVNEEQPASL 421
++ ++ +++ + GMV I GL +N+ DK + I D +L+ EE L
Sbjct: 433 DTHLV---SRSLSMQPGMVVTIEPGLYINSNNKIIDKRYHGIGIRIEDDILITEEGQEVL 489
Query: 422 LTQSKKKVKNI 432
+ K K I
Sbjct: 490 SAECPKDPKEI 500
>SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14)
Length = 1709
Score = 37.5 bits (83), Expect = 0.061
Identities = 51/233 (21%), Positives = 101/233 (43%), Gaps = 16/233 (6%)
Query: 463 IESKLRTEHSSEEKRKEHQRELAISLNEKAKERLAKQSTGKDTEKLRKSTVSYKS-ISQM 521
IE++ + E H +E+ +SL ++ ERL ++ TE + + T +YK I ++
Sbjct: 1116 IETQKQNNGELELANNRHMQEI-VSLVQEV-ERLKSETGNTSTESVTEDTQTYKDHIEEL 1173
Query: 522 PRENEVKELKLYVDRKYETVILPIFGVPVPFHISTIKNISQSVEGDYTYLRINFFHPGAT 581
+EN+ + L + +YE FGV + H ++++ + +E R
Sbjct: 1174 QKEND-RYKSLIEELEYEG--HDKFGVLLSQHEKELESLKEELEEQIAKKREQLAKEAGA 1230
Query: 582 MGRNEGGNYSQPDATFVKEVTYRSTNTKEPGEISPPSSNLNTGFRLIKEV---QKKFKTR 638
+ Y +E+ + K E+ ++ L+ +L++ V QKK R
Sbjct: 1231 KRQKLKEEYEGKLRVIYEELVSERSKNK---ELMNQNNQLSQKVKLLEGVTTKQKKDIER 1287
Query: 639 EAEEREK-EDLVKQDTLILSQNKGNPKLKDLY-IRPNIVTKRMSGSLEAHTNG 689
+ EK ++L +Q S+ NPK+ + Y + + K +S + + NG
Sbjct: 1288 VKQMEEKLKELERQSK--QSEETDNPKVIESYEDKIKALEKEISNLKDRNNNG 1338
>SB_42014| Best HMM Match : Myosin_tail_1 (HMM E-Value=0.083)
Length = 1007
Score = 37.1 bits (82), Expect = 0.080
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 459 RTAVIESKLRTEHSSEEKRKEHQRELAISLNEKAKERLAKQSTGKDTEKLRKSTVSYKSI 518
RT E K T E K+K + S +KAKE + K T D EK R +++
Sbjct: 590 RTLQDEVKSLTTRLDETKQKSEELAACKSELKKAKEEIEKAWTLYDKEKDRLEKINW--- 646
Query: 519 SQMPRENEVKELKLYVDRKYETVI 542
QM E + KEL+ DR+Y+T+I
Sbjct: 647 -QMTDELQEKELE--NDRQYQTII 667
>SB_36642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 625
Score = 34.3 bits (75), Expect = 0.57
Identities = 25/106 (23%), Positives = 51/106 (48%), Gaps = 6/106 (5%)
Query: 472 SSEEKRKEHQRELAISLNEKAKERLAKQSTGKDTEKLRKSTVSYKSISQMPRENEVKELK 531
+SE + KE + + +EKA AKQ + +D ++ K V+ + S +P + + +
Sbjct: 191 TSEAETKEKDAKRFDTWSEKATPNQAKQPSDEDINRILKH-VNIRKTSTVPSSTKANKCR 249
Query: 532 LYVDRKYETVILPIFGVPVPF----HISTIKNISQSVEGDYTYLRI 573
+++D +T + P G H+ T++N V+ T L++
Sbjct: 250 IWID-GVKTTVEPDTGADANVMDEQHLKTLQNAQPEVQLMKTTLKL 294
>SB_35645| Best HMM Match : TAT_ubiq (HMM E-Value=3.9)
Length = 236
Score = 34.3 bits (75), Expect = 0.57
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 88 KIEFLRQIENGKDETELPPAKLLIRDRNDKDKENFNKLLQEIKK 131
KI+ Q ENG+DE ELPPA I D+ + + +++ +K+
Sbjct: 159 KIQGFGQPENGEDEDELPPALAQIVDKMEDQQNKIDEMYTLVKQ 202
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 34.3 bits (75), Expect = 0.57
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 593 PDATFVKEVTYRSTNTKEPGEISPPSSNLNTGFRLIKEVQKKFKTREAEE 642
P++T E+T S +T PG P S + TG ++ E +T A E
Sbjct: 1591 PESTLAPEITIASESTVAPGTTMAPESTVATGTTIVPETTLALETTTAPE 1640
Score = 31.9 bits (69), Expect = 3.0
Identities = 16/50 (32%), Positives = 23/50 (46%)
Query: 593 PDATFVKEVTYRSTNTKEPGEISPPSSNLNTGFRLIKEVQKKFKTREAEE 642
P++T E+T S +T PG P S + TG + E +T A E
Sbjct: 2171 PESTLAPEITIASESTVAPGTTMAPESTVATGTTIAPETILALETTTAPE 2220
>SB_5808| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 473
Score = 33.9 bits (74), Expect = 0.75
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 455 GRGKRTAVIESKLRTEHSSEEKRKE--HQRELAISLNEKAKERLAKQSTGKDTEKLRK 510
G+ K+T + K+ + ++ +KE H++E A S +K +E+ K+S GK + K
Sbjct: 261 GQSKKTEAKQEKIEKKSQEQKPKKEKIHEKESATSNEKKEQEKERKKSEGKPKPRSEK 318
>SB_45032| Best HMM Match : RVT_1 (HMM E-Value=1.6e-21)
Length = 367
Score = 33.1 bits (72), Expect = 1.3
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 7/91 (7%)
Query: 519 SQMPRENEVKELKLYVD--RKYETVILPIFGVPVPFHISTIKNISQSVEGDYTYLRINFF 576
S+ + +V +L L VD K+E+VI G P + + ++ + L +
Sbjct: 7 SRREKGGQVSDLILGVDFQSKHESVIFQYKGSEPPLSVCSFSTLNVDPPEPFANLTADC- 65
Query: 577 HPGATMGRNEGGNYSQPDATFVKEVTYRSTN 607
HP AT R YSQ D+TF+ E R N
Sbjct: 66 HPIATKSRR----YSQEDSTFIDEEVKRLLN 92
>SB_35188| Best HMM Match : RVT_1 (HMM E-Value=2.3e-25)
Length = 467
Score = 32.7 bits (71), Expect = 1.7
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 503 KDTEKLRKSTVSYKSISQMPRENEVKELKLYVDRKYETVILPIFGVPVPFHISTIKNIS 561
KD K + + S +S SQ + + LK Y DR + ++ P +PFH+ TI+N++
Sbjct: 393 KDLCKYKTHSRSLRSASQQYLQVKRGNLKTYGDRAF-SIAAPKLWNELPFHLRTIQNLN 450
>SB_22653| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 737
Score = 32.7 bits (71), Expect = 1.7
Identities = 18/63 (28%), Positives = 30/63 (47%)
Query: 464 ESKLRTEHSSEEKRKEHQRELAISLNEKAKERLAKQSTGKDTEKLRKSTVSYKSISQMPR 523
ESK R HS + ++ E +RE +K+++R + KD +K R S+ R
Sbjct: 200 ESKERRRHSDKAEKSERKREKEEKKRDKSEKRERSRERSKDRKKDRDSSKHRDKEKDRSR 259
Query: 524 ENE 526
E +
Sbjct: 260 ERD 262
>SB_35649| Best HMM Match : M (HMM E-Value=6e-09)
Length = 1279
Score = 32.3 bits (70), Expect = 2.3
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Query: 465 SKLRTEHSSEEKRKEHQRELAISLNEKAKERLAKQSTGKDT--EKLRKSTVSYKSISQMP 522
+K E+ S E++ + QRE+ SLN K KE L +Q KD+ E LR+ ++ S++
Sbjct: 892 NKFYNENQSAEEKLQGQREVLDSLNAKVKE-LEEQLELKDSDLEVLRRDFKEAEN-SKLE 949
Query: 523 RENEVKEL 530
E ++ EL
Sbjct: 950 TERQLSEL 957
>SB_58624| Best HMM Match : E-MAP-115 (HMM E-Value=0.24)
Length = 298
Score = 31.9 bits (69), Expect = 3.0
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 456 RGKRTAVIESKLRTEHSSEEKRKEHQRELAISLNEKAK-ERLAKQSTGKDTEKL--RKST 512
R KR E + R + + EEKR+E +R E+ K ER ++ K+ ++L K
Sbjct: 93 REKRRREKEEEERLKRAEEEKRREEKRREEKRREEELKRERKEQERREKERQRLEKEKKE 152
Query: 513 VSYKSISQMPRENEVKELK 531
+ +KS + P + + L+
Sbjct: 153 IGFKSSTTTPSKGGAEVLE 171
>SB_35175| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 31.9 bits (69), Expect = 3.0
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Query: 585 NEGGNYSQPDATFVKEVT--YRSTNTKEPGEISPPSSNLNTGFRLIKEVQKKFKTREAEE 642
NE GN QP+ T KE+T ++ T +E + P N L K +KK R+
Sbjct: 16 NESGNKDQPNPT--KEITKDFKETKKEEDKNVVPTKGFANLA-SLSKNQRKKLLKRQKYL 72
Query: 643 REKED 647
EK+D
Sbjct: 73 EEKKD 77
>SB_27611| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 437
Score = 31.9 bits (69), Expect = 3.0
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Query: 454 LGRGKRTAVIESKLRTEHSSEEKRKEHQRELAISLNEKAKERLAKQSTGKDTEKLRKSTV 513
+G G++ +ES R E EKRKE + + EK KE + S ++ EK RK
Sbjct: 299 VGEGEKRKEVESSSRVEEG--EKRKEVESSSRVEEGEKRKE-VESSSRVEEGEK-RKEVE 354
Query: 514 SYKSISQMPRENEVK 528
S + + + EV+
Sbjct: 355 SSSRVEEGEKRKEVE 369
>SB_41695| Best HMM Match : Spectrin (HMM E-Value=0)
Length = 2322
Score = 31.5 bits (68), Expect = 4.0
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 458 KRTAVIESKLRTEHSSEEKRKEHQRELAISLNEKAKERLAKQSTGKDTEKLRKSTVSYKS 517
+R I+ +L+ EE RK + E + E K+R K+ + E +K +
Sbjct: 202 QRNNEIQERLKQLEEEEEARKRAELEDKMR-RENEKKR--KEEERAEAELKKKEEEERQR 258
Query: 518 ISQMPRENEVKELKLYVDRKY 538
++ R+N+ KE K VD KY
Sbjct: 259 RAEEKRKNDEKEKKKKVDNKY 279
>SB_23345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 903
Score = 31.5 bits (68), Expect = 4.0
Identities = 17/70 (24%), Positives = 30/70 (42%)
Query: 470 EHSSEEKRKEHQRELAISLNEKAKERLAKQSTGKDTEKLRKSTVSYKSISQMPRENEVKE 529
EH +K+ S ++ KER ++ KD+E K ++ + R E +E
Sbjct: 393 EHKEHHHKKKRSHSKTSSTTDEEKERKKSETKNKDSEDEEKERKKREAEEEEERRREEEE 452
Query: 530 LKLYVDRKYE 539
+ +RK E
Sbjct: 453 RREEEERKRE 462
>SB_10935| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 277
Score = 31.5 bits (68), Expect = 4.0
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 764 DDLAAEQSERELRHKLKVAFKSFCERVENMTKQEVEFDTPFRELGF 809
D+L + + E+ H+LK K F ER E++ KQ+V D ++ +
Sbjct: 90 DNLEKLKEDLEIEHELKNQKKEFLERQESVEKQKVYEDAFIEQMNY 135
>SB_32768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1393
Score = 31.5 bits (68), Expect = 4.0
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 468 RTEHSSEEK--RKEHQRELAISLNEKAKERLAKQSTGKDTEKLRKSTVSYKSISQMPREN 525
R E S E+ R+E +RE + + +ER+A+Q D E+LR+ + + RE
Sbjct: 1026 RGESRSREEIMREEEERERREADRRREEERIAEQKRRDDEERLRREEEERRLEEERRREE 1085
Query: 526 EVK 528
E K
Sbjct: 1086 ERK 1088
>SB_59267| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1444
Score = 31.1 bits (67), Expect = 5.3
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Query: 464 ESKLRTEHSS-EEKRKEHQRELAISLNEKAKERLAKQSTGKD-TEKLRKSTVSYKSISQM 521
+SK R E +S E K+K+ SL K+K D T KLR+ +S
Sbjct: 232 KSKQREEDTSGENKKKDTLFHFTDSLKNKSKSNDESSENPTDNTSKLRRRVLSDLRRFAR 291
Query: 522 PRENEVKELKLYVDR 536
P EN +E + +++R
Sbjct: 292 PNENSFQEQERHLER 306
>SB_57263| Best HMM Match : SAM_1 (HMM E-Value=1.5)
Length = 574
Score = 31.1 bits (67), Expect = 5.3
Identities = 28/108 (25%), Positives = 47/108 (43%), Gaps = 6/108 (5%)
Query: 288 SNIVRTLLVNPTDEVQSNYNFLLNIEEEVMKSLVAGAKLSTVYEAGLALAKKEKPNLVEN 347
S + + LV P + ++ N ++N+ E S Y G + K K EN
Sbjct: 190 SLLFQDALVFPEFQAKNLRNRVINLRTEFPGSTTLVLMWLRAY--GQIMCSKYK----EN 243
Query: 348 LTKSFGFAMGIEFRESSIIIGPKTNVTAKKGMVFNINIGLANLTNSNA 395
TK F +++ E + + KKG+V N+ +G A L +S+A
Sbjct: 244 FTKEFADHPDVKYFEGNYLCYFGNTEPLKKGLVENVIVGYAFLVDSHA 291
>SB_57061| Best HMM Match : Sec62 (HMM E-Value=0.27)
Length = 243
Score = 31.1 bits (67), Expect = 5.3
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 6/53 (11%)
Query: 490 EKAKERLAKQSTGKDTEKLRKSTVSYKSISQMPRENEVKELKLYVDRKYETVI 542
EKAKE + K D EK R K I +M E + KEL+ DR+Y+T++
Sbjct: 193 EKAKEEIEKARASYDKEKDRLE----KLIKEMTDELQEKELEN--DRQYQTIV 239
>SB_56315| Best HMM Match : Collagen (HMM E-Value=0.00013)
Length = 898
Score = 31.1 bits (67), Expect = 5.3
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 469 TEHSSEEKRKEHQRE-LAISLNEKAKERLAKQSTGKDTEKLRKSTVSYKSISQMPRENEV 527
TE +EK+K+ RE + + + EK + LAK S+G T + K S R+ ++
Sbjct: 765 TEDPIQEKKKQRIREQITLGMKEKLNKTLAKTSSGGVTRRKLKPISDGSKYSFFLRDTKM 824
Query: 528 KELK 531
+ K
Sbjct: 825 ERQK 828
>SB_26233| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 463
Score = 31.1 bits (67), Expect = 5.3
Identities = 19/82 (23%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 458 KRTAVIESKLRTEHSSEEKRKEHQRELAISLNEKAKERLAKQSTGKDTEKLRKSTVSYKS 517
K+ + E K + + + K+KE +R+ E+ KER+ +Q K E+ K ++
Sbjct: 300 KKEELKERKRQEKLEQKAKKKEKERQEREKEKEREKERI-QQEKEKQKERREKEKQKHQE 358
Query: 518 ISQMPRENEVKELKLYVDRKYE 539
+ R+ E ++L+ ++ E
Sbjct: 359 KKEKERQREKEKLEKEKQKELE 380
>SB_15350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1126
Score = 31.1 bits (67), Expect = 5.3
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 9/77 (11%)
Query: 464 ESKLRTEHSSEEKRKEHQRE---LAISLNEKAKERLAKQSTGKDTEKLRKSTVSYKSISQ 520
E K E ++E+++ +RE + L EKA++ ++ EKLR + Q
Sbjct: 928 EKKEEAERKAKEEKEREERERKRICQLLKEKAEQERRERELKAREEKLRLAR------EQ 981
Query: 521 MPRENEVKELKLYVDRK 537
M RE + LKL ++RK
Sbjct: 982 MMREERERTLKLELERK 998
>SB_1307| Best HMM Match : Filament (HMM E-Value=0.13)
Length = 916
Score = 31.1 bits (67), Expect = 5.3
Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 722 LLHFHLKHAIMFGKKKHVDV--QFYTEVGE---ITTDLGKHQHMHDRDDLAAEQSERELR 776
LL +H KH I+ K H +V + + E I +D+ H H +R+ A E+ +EL
Sbjct: 346 LLEYH-KHEILQMKTNHNEVIQSLESRIEEELSIKSDIQTHVHTLERNIQALEEERKELV 404
Query: 777 HKLKVAFKSFCERVENMTKQEVEFDTPFREL 807
+ + +K E V + E + EL
Sbjct: 405 SRFEQLYKKEDEIVSSRNVLEERYTIEINEL 435
>SB_36919| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 122
Score = 30.7 bits (66), Expect = 7.0
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 470 EHSSEEKRKEHQRELAISLNEKAKERLAKQSTGKDTEKLRKSTVSYKSISQMPRENEVKE 529
+ S+ K KE + A++++ E L S G+ E STV+ KS +Q+P N +K
Sbjct: 37 QQSAYSKSKEWVTK-ALAMDISTSENLTTDSNGESNETPVNSTVNPKSTTQLP--NNLKL 93
Query: 530 LKLY 533
++ Y
Sbjct: 94 IEKY 97
>SB_24046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2848
Score = 30.7 bits (66), Expect = 7.0
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 466 KLRTEHSSEEKRKEHQRELAISLNEKAKERLAKQSTGKDTEKLRKSTVSYKSISQMPREN 525
KL E E +R E ++EL I K KE+ + + E+ R+ K I QM +
Sbjct: 1515 KLEREKEEERQRLEREKELEIERQLKIKEKEVIRLQRERDEERRRREDEEKRI-QMEKVE 1573
Query: 526 EVKELKLYVDRKYE 539
E+K ++ + + E
Sbjct: 1574 ELKRIEREKEEELE 1587
>SB_56456| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1266
Score = 30.7 bits (66), Expect = 7.0
Identities = 17/69 (24%), Positives = 35/69 (50%)
Query: 473 SEEKRKEHQRELAISLNEKAKERLAKQSTGKDTEKLRKSTVSYKSISQMPRENEVKELKL 532
SE+ R+ + +L+ K +++K+S T ++ + + +S+S +P V E +
Sbjct: 245 SEKGRQSGKSQLSKQSRLSGKSQMSKKSRASRTSQISRQSSVVESVSSIPTIASVHESVI 304
Query: 533 YVDRKYETV 541
VD K +V
Sbjct: 305 SVDEKPPSV 313
>SB_40600| Best HMM Match : DUF667 (HMM E-Value=0.35)
Length = 449
Score = 30.7 bits (66), Expect = 7.0
Identities = 30/96 (31%), Positives = 42/96 (43%), Gaps = 10/96 (10%)
Query: 528 KELKLYVD--RKYETVILPIFGVPVPFHISTIKNISQSVEGDYTYLRINFFHPGATMGRN 585
++L L VD K+E+VI G P + + ++ + L + HP AT R
Sbjct: 18 QDLILGVDFQSKHESVIFQYKGSEPPLSVCSFSTLNVDPPEPFANLTADC-HPIATKSRR 76
Query: 586 EGGNYSQPDATFVKEVTYRSTNTKEPGEISPPSSNL 621
YSQ D+TF+ E R N G I P S L
Sbjct: 77 ----YSQEDSTFIDEEVKRLLN---EGIIEPSRSPL 105
>SB_31025| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 221
Score = 30.7 bits (66), Expect = 7.0
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 458 KRTAVIESKLRTEHSSEEKRKEHQRELAISLNEKAKERLAKQSTGKDTE-KLRKSTVSYK 516
KR + + R + SEEKR +Q E + + +ER + QS GK + + SY+
Sbjct: 127 KRASYQSEEERASYQSEEKRASYQSEEKRASYQSEEERASYQSGGKRASYQSEEKRASYQ 186
Query: 517 S 517
S
Sbjct: 187 S 187
>SB_23024| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 593
Score = 30.7 bits (66), Expect = 7.0
Identities = 20/75 (26%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 453 ILGRGKRTAVIESKLRTEHSSEEKRKEHQRELAISLNEKAK--ERLAKQSTGKDTEKLRK 510
+ G K + E++L +S E+ + +EL +L+EK + ++L K+ GK+ EK+ +
Sbjct: 438 VKGLKKVVSEKEAELGARYSELEETRSRVQELNDTLSEKERTIDKL-KEKLGKEAEKINR 496
Query: 511 STVSYKSISQMPREN 525
++S + RE+
Sbjct: 497 ERQQWESETSTLRED 511
>SB_21715| Best HMM Match : Serglycin (HMM E-Value=0.054)
Length = 1079
Score = 30.7 bits (66), Expect = 7.0
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 458 KRTAVIESKLRTEHSSEEKRKEHQRELAISLNEKAKERLAKQSTGKDTEKLRKSTVSYKS 517
+ T E+ +H +R H R N K K+ K S K +LRK + +S
Sbjct: 913 QETGARENDPGKKHKHRHRRHHHHRR---QHNRKIKKHRRKHSARKHERRLRKGSDKPES 969
Query: 518 ISQMPRENEVKE 529
+ ++ E+E+ E
Sbjct: 970 MEEIFEEDEMDE 981
>SB_18643| Best HMM Match : Ion_trans (HMM E-Value=0)
Length = 1885
Score = 30.7 bits (66), Expect = 7.0
Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Query: 474 EEKRKEHQRELAISLNEKAKERLAKQSTGKDTEKLRKSTVS 514
EEK+KE + EL + L + KE S+ KD E R ST S
Sbjct: 866 EEKKKEREEELEMKLRMEEKE----SSSNKDLENKRASTSS 902
>SB_59531| Best HMM Match : zf-CCHC (HMM E-Value=0.00021)
Length = 323
Score = 30.3 bits (65), Expect = 9.2
Identities = 28/98 (28%), Positives = 39/98 (39%), Gaps = 8/98 (8%)
Query: 537 KYETVILPIFGVPVPFHISTIKNISQSVEGDYTYLRINFFHPGATMGRNEGGNYSQPDAT 596
K+E+VI G P + + ++ + L + HP AT R YSQ D+T
Sbjct: 168 KHESVIFQYKGSEPPLSVCSFSTLNVDPPEPFANLTADC-HPIATKSRR----YSQEDST 222
Query: 597 FVKEVTYRSTNTKEPGEISPPSSNLNTGFRLIKEVQKK 634
F+ E R N G I P S L K+ K
Sbjct: 223 FIDEEVKRLLN---EGIIEPSRSPWRAQVVLTKDENHK 257
>SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029)
Length = 1866
Score = 30.3 bits (65), Expect = 9.2
Identities = 20/83 (24%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Query: 456 RGKRTAVIESKLRTEHSSEEKRKEHQRELAISLNEKAKERLAKQSTGK-DTEKLRKSTVS 514
+ KR + + R + E+++KE +++L I ++ KE+ ++ K + EK +++ +
Sbjct: 914 KDKREREEKERKRRQQQLEKEKKEKEKKLLIEKEKREKEKQKERLREKEEKEKQKEAERA 973
Query: 515 YKSISQMPRENEVKELKLYVDRK 537
K ++ +E+++ E K DRK
Sbjct: 974 KKEKERLLQEDKLHE-KEEKDRK 995
>SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1323
Score = 30.3 bits (65), Expect = 9.2
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 464 ESKLRTEHSSEEKRKEHQRELAISLNEKAKER-LAKQSTGKDTEKLRKSTVSYKSISQMP 522
ES + +EK KE QR+ + S ++ +R K+ KD ++ K + S S+
Sbjct: 165 ESSDSEKRLKKEKNKEKQRDSSESSSDSEDDRKRRKKKVKKDKKQKAKDSSESLSDSEDD 224
Query: 523 RENEVKELKLYVDRK 537
RE K++K + K
Sbjct: 225 RERRKKKVKKEIKHK 239
>SB_10642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1023
Score = 30.3 bits (65), Expect = 9.2
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 628 IKEVQKKFKTRE-AEEREKEDLVKQDTLILSQNKGNPKLKDLYIRPNIVTKRMSGSLE 684
++EV+++ KTR+ A++R +E + D + + +G P L P +TK+M L+
Sbjct: 801 LEEVEERQKTRKVAKKRRREGTEEPDAPKMKKKRGRPPAVRLSPNPPDLTKKMKRLLK 858
>SB_9892| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0013)
Length = 663
Score = 30.3 bits (65), Expect = 9.2
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 628 IKEVQKKFKTREAE-EREKEDLVKQDTLILSQNKGNPKLKDLYIRPNIVTKRMSGSLEAH 686
I++++ K K+ +AE + ++DL ++D LSQ K KLK+ + K L+A
Sbjct: 9 IEKLRGKLKSIQAELNKTQQDLEEKDKDFLSQTKEYSKLKEEMNSDAVKVKWAQNKLKAE 68
Query: 687 TNGFRFTSVRGDKVDILYNNIKNAFFQPCDGEMI 720
+ T K+ + N +K A +GEMI
Sbjct: 69 LEAHKETKT---KLTQVTNKLKEA---KEEGEMI 96
>SB_50370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1059
Score = 30.3 bits (65), Expect = 9.2
Identities = 19/91 (20%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Query: 461 AVIESKLRTEHSSEEKRKEHQRELAISLNEKAKERL-AKQSTGKDTEKLRKSTVSYKSIS 519
+V++ +R+ S K + R + ++ + R +K ST + + + S
Sbjct: 84 SVLDLAVRSNQPSGTKMQLKSRVPSTPTKQQPESRTPSKHSTDEPLTPTANLKMLVSAAS 143
Query: 520 QMPRENEVKELKLYVDRKYETVILPIFGVPV 550
R+ E+K+ +L+ D ++P F +PV
Sbjct: 144 PAIRDREIKKRELFTDSPGSPAVVPSFALPV 174
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.315 0.132 0.375
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,092,450
Number of Sequences: 59808
Number of extensions: 1254864
Number of successful extensions: 4437
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 4340
Number of HSP's gapped (non-prelim): 127
length of query: 1136
length of database: 16,821,457
effective HSP length: 90
effective length of query: 1046
effective length of database: 11,438,737
effective search space: 11964918902
effective search space used: 11964918902
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 65 (30.3 bits)
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