GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002779-TA|BGIBMGA002779-PA|IPR000994|Peptidase M24,
catalytic core, IPR013953|FACT complex subunit Spt16p/Cdc68p,
IPR013719|Domain of unknown function DUF1747, eukaryote
         (1136 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein...    25   8.5  
AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.            25   8.5  

>CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein
           protein.
          Length = 420

 Score = 25.4 bits (53), Expect = 8.5
 Identities = 12/67 (17%), Positives = 35/67 (52%), Gaps = 2/67 (2%)

Query: 474 EEKRKEHQRELAISLNEKA--KERLAKQSTGKDTEKLRKSTVSYKSISQMPRENEVKELK 531
           ++  ++H++ L     ++A  K+R  K    +  E+ R    +  ++ +  ++ E+K ++
Sbjct: 112 QQYEEQHRKRLEQQSKQRAIEKDRKKKDEIHRQIERERADRSAIDNLLEESKQRELKRME 171

Query: 532 LYVDRKY 538
           L + ++Y
Sbjct: 172 LAMVKQY 178


>AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.
          Length = 420

 Score = 25.4 bits (53), Expect = 8.5
 Identities = 12/67 (17%), Positives = 35/67 (52%), Gaps = 2/67 (2%)

Query: 474 EEKRKEHQRELAISLNEKA--KERLAKQSTGKDTEKLRKSTVSYKSISQMPRENEVKELK 531
           ++  ++H++ L     ++A  K+R  K    +  E+ R    +  ++ +  ++ E+K ++
Sbjct: 112 QQYEEQHRKRLEQQSKQRAIEKDRKKKDEIHRQIERERADRSAIDNLLEESKQRELKRME 171

Query: 532 LYVDRKY 538
           L + ++Y
Sbjct: 172 LAMVKQY 178


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.315    0.132    0.375 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 933,205
Number of Sequences: 2123
Number of extensions: 36797
Number of successful extensions: 70
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 70
Number of HSP's gapped (non-prelim): 2
length of query: 1136
length of database: 516,269
effective HSP length: 71
effective length of query: 1065
effective length of database: 365,536
effective search space: 389295840
effective search space used: 389295840
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 53 (25.4 bits)