Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002779-TA|BGIBMGA002779-PA|IPR000994|Peptidase M24,
catalytic core, IPR013953|FACT complex subunit Spt16p/Cdc68p,
IPR013719|Domain of unknown function DUF1747, eukaryote
(1136 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006644-4|AAF39835.1| 1030|Caenorhabditis elegans Hypothetical ... 944 0.0
AC006644-3|AAF39838.2| 491|Caenorhabditis elegans Hypothetical ... 206 5e-53
L15314-4|AAF99988.2| 618|Caenorhabditis elegans Hypothetical pr... 36 0.16
U23168-5|ABD63247.1| 2702|Caenorhabditis elegans Temporarily ass... 35 0.29
U23168-2|AAC38806.2| 1633|Caenorhabditis elegans Temporarily ass... 35 0.29
U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily ass... 35 0.29
Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical pr... 33 0.88
Z78417-12|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical p... 33 0.88
AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein. 33 0.88
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 33 1.2
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 33 1.2
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 33 1.2
U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical pr... 32 2.0
AF077529-1|AAC26253.1| 690|Caenorhabditis elegans Hypothetical ... 32 2.0
AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical ... 32 2.7
L13200-8|AAA28188.2| 324|Caenorhabditis elegans Hypothetical pr... 31 3.5
Z79755-11|CAB02109.1| 2034|Caenorhabditis elegans Hypothetical p... 31 4.7
U67949-5|AAB07566.1| 705|Caenorhabditis elegans Hypothetical pr... 31 4.7
U57652-1|AAB02243.1| 2034|Caenorhabditis elegans FER-1 protein. 31 4.7
U23452-4|ABE73334.1| 1316|Caenorhabditis elegans Hypothetical pr... 31 4.7
U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical pr... 31 4.7
U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical pr... 31 4.7
AC006790-7|AAF60731.1| 547|Caenorhabditis elegans Suppressor of... 31 4.7
U64441-1|AAB06457.1| 549|Caenorhabditis elegans nonsense-mediat... 30 8.2
U64440-1|AAB06456.1| 549|Caenorhabditis elegans nonsense-mediat... 30 8.2
U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction... 30 8.2
U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction... 30 8.2
U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction... 30 8.2
U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction... 30 8.2
AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein. 30 8.2
AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein. 30 8.2
AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (droso... 30 8.2
AF106579-3|AAM45364.1| 4369|Caenorhabditis elegans Kettin (droso... 30 8.2
AF106579-2|AAM45363.1| 4447|Caenorhabditis elegans Kettin (droso... 30 8.2
AF106579-1|AAC78200.4| 4889|Caenorhabditis elegans Kettin (droso... 30 8.2
AF067220-1|AAK84500.1| 1014|Caenorhabditis elegans Hypothetical ... 30 8.2
AF024502-4|AAB70374.1| 675|Caenorhabditis elegans Hypothetical ... 30 8.2
AF003141-6|AAK21489.1| 549|Caenorhabditis elegans Suppressor wi... 30 8.2
AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp ge... 30 8.2
AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein. 30 8.2
>AC006644-4|AAF39835.1| 1030|Caenorhabditis elegans Hypothetical
protein F55A3.3 protein.
Length = 1030
Score = 944 bits (2336), Expect = 0.0
Identities = 466/931 (50%), Positives = 637/931 (68%), Gaps = 21/931 (2%)
Query: 6 LDKETFYRRMKKLYATWKAVASDPKSDDALSKVDCLVSCVGVDEETLYSKSTSLQTWLFG 65
L+K+ F++R ++LY W+ K D L + L G + + Y+K+++L TWLFG
Sbjct: 8 LNKDLFFQRAERLYEHWE------KGADGLDSIKSLAFVYG-ETDNPYTKTSALFTWLFG 60
Query: 66 YELPDTITVLTEHSMCFLASKKKIEFLRQIENGKDET-ELPPAKLLIRDRNDKDKENFNK 124
+E+ DT+ +L + + L S +K+EF + + ++P L+RD+ DKD NF K
Sbjct: 61 HEIADTVLLLLKDHIYILGSNRKVEFFGSVTGDNQSSGKVPTVSTLLRDKTDKDAGNFEK 120
Query: 125 LLQEIKKSKSGKTLGIFVKDNYPGEFCESW-KAVLKGEKSENVDVSSAIALLMAPKEDSE 183
L+ IK + G +G FVK+ + EF SW KA+ +G ++N DV+ A L A K+D E
Sbjct: 121 LIDHIKSA--GGDVGNFVKEKFSSEFVSSWNKALEEGGVNKN-DVTLAFTHLFAVKDDKE 177
Query: 184 IITIKKACLVTVDVFTKYLKDQIMEIIDSDKKVKHSKLAEGVETAVSDKKYVTGVDTSQV 243
+ I+K+ T +T + + +EIID +K+V+HS L+ + D K + +
Sbjct: 178 MDLIRKSAQATTASWTA-ARARYVEIIDQEKRVRHSVLSNEFAAFMKDSKVQQALAKYEA 236
Query: 244 DMCYPPIIQSGGHYSLKFSAVSDKNHLH--FGAIVCSLGARYKSYCSNIVRTLLVNPTDE 301
D CY PI+ SGG+YS K++ S ++HLH FG I+ S GAR YC+N+ RT+L+ P+ E
Sbjct: 237 DTCYDPIVMSGGNYSFKWNHESSESHLHSQFGTIITSFGARLSEYCTNLTRTMLIFPSSE 296
Query: 302 VQSNYNFLLNIEEEVMKSLVAGAKLSTVYEAGLALAKKEKPNLVENLTKS-FGFAMGIEF 360
+++ Y +L E V+ +L GAKLS VY+ G+ ++ P L E L K GFA GIEF
Sbjct: 297 LETAYEAILAAELAVIAALKPGAKLSDVYKIGIDTLTEKSPKLAETLNKKELGFATGIEF 356
Query: 361 RESSIIIGPKTNVTAKKGMVFNINIGLANLTNSNASDKEGKTYALFIGDTVLVNEEQPAS 420
RES + I K + K GMVF + IG+ ++ N N +K GK A+ I DT+LV EE
Sbjct: 357 RESRLAISAKCDEVVKAGMVFIVYIGVDSIPNKNKGEK-GKPAAIAISDTILVKEEGDNE 415
Query: 421 LLTQ-SKKKVK-NIGIFLXXXXXXXXXXXXXXXXILGRGKRTAVIESKLRTEHSSEEKRK 478
+LT+ +K ++K N+ F +LGRG+R+ V+ + R + ++EE RK
Sbjct: 416 ILTEKAKSRLKSNVIKFKEEQENREAEKDNDQKKMLGRGQRSVVLTDQTRNKTTNEELRK 475
Query: 479 EHQRELAISLNEKAKERLAKQSTGKDTEKLRKSTVSYKSISQMPRENEVKELKLYVDRKY 538
E Q+EL + LNE AK RL+KQ G D +K +KS VSYK+ + P++ +V+++ ++VDRKY
Sbjct: 476 ERQKELGVQLNELAKARLSKQGGGTDEKKSKKSNVSYKTEERFPQDADVQKMLIFVDRKY 535
Query: 539 ETVILPIFGVPVPFHISTIKNISQSVEGDYTYLRINFFHPGATMGRNEGGNYSQPDATFV 598
++V++PIFG+PVPFHIS IKN SQSVEGD+TYLRINF PG+ +G+ + G + P A ++
Sbjct: 536 DSVVVPIFGIPVPFHISMIKNCSQSVEGDFTYLRINFATPGSQVGK-DSGQFPHPLAHYM 594
Query: 599 KEVTYRSTNTKEP-GEISPPSSNLNTGFRLIKEVQKKFKTREAEEREKEDLVKQDTLILS 657
KE+T+R++N K+ + + PS NL+T FRLIKE+QK+FKT EAEEREKE VKQD LILS
Sbjct: 595 KELTFRASNIKDHHSDSTAPSHNLSTAFRLIKEMQKRFKTEEAEEREKEGAVKQDKLILS 654
Query: 658 QNKGNPKLKDLYIRPNIVTKRMSGSLEAHTNGFRFTSVRGDKVDILYNNIKNAFFQPCDG 717
QNK NPKLKDL IRPNI+ KR++GSLEAHTNGFR+TS+RGD++D+LYNNIK+AFFQPCD
Sbjct: 655 QNKLNPKLKDLLIRPNIIQKRITGSLEAHTNGFRYTSLRGDRIDVLYNNIKHAFFQPCDN 714
Query: 718 EMIILLHFHLKHAIMFGKKKHVDVQFYTEVGEITTDLGKHQHMHDRDDLAAEQSERELRH 777
EMIILLHFHLK+ +++GKKK+ DVQFYTEVGEITTDLGK+ HM DRDD+ +EQ ERE+R
Sbjct: 715 EMIILLHFHLKNPVLWGKKKYKDVQFYTEVGEITTDLGKYHHMQDRDDMQSEQQEREMRR 774
Query: 778 KLKVAFKSFCERVENMTKQEVEFDTPFRELGFPGAPYRSTVLLQPTSGALVNLTEWPPFV 837
+L AF SFCE+V +T + EFD+PF LGF G PYRS L+PT+ LVNLTEWP F+
Sbjct: 775 RLNAAFNSFCEKVSRLTNDQFEFDSPFAGLGFFGVPYRSATTLKPTASCLVNLTEWPTFI 834
Query: 838 IALEDVELVHFERVQFHLKNFDMVFVFKDYAKKVAMVNAVPMDMLDHVKEWLNSCDIRYS 897
+ L +VELVHFERV LKNFDMVF+FKDY K MV +PM +D +KEWL++CDI YS
Sbjct: 835 VTLSEVELVHFERVSLQLKNFDMVFIFKDYKIKPQMVAQIPMSSIDKIKEWLHTCDIWYS 894
Query: 898 EGIQSLNWTKVMKTITDDIEGFFENGGWSFL 928
EGIQSLNW KVMKTITDD+E FFE GGWSFL
Sbjct: 895 EGIQSLNWAKVMKTITDDLEAFFEEGGWSFL 925
>AC006644-3|AAF39838.2| 491|Caenorhabditis elegans Hypothetical
protein F55A3.7 protein.
Length = 491
Score = 206 bits (504), Expect = 5e-53
Identities = 100/165 (60%), Positives = 131/165 (79%), Gaps = 3/165 (1%)
Query: 529 ELKLYVDRKYETVILPIFGVPVPFHISTIKNISQSVEGDYTYLRINFFHPGATMGRNEGG 588
++ ++VDRKY++V++PIFG+PVPFHIS IKN SQSVEGD TYLRINF PG+ +G+ + G
Sbjct: 240 KMLIFVDRKYDSVVVPIFGIPVPFHISMIKNCSQSVEGDLTYLRINFATPGSQVGK-DSG 298
Query: 589 NYSQPDATFVKEVTYRSTNTKE-PGEISPPSSNLNTGFRLIKEVQKKFKTREAEEREKED 647
+ P A ++KE T+R++N K+ + + PS NL+T FR IKE+QK+FK+ EAE+REKE
Sbjct: 299 QFPHPLAHYMKEFTFRASNIKDHHSDSTAPSRNLSTAFRFIKEMQKRFKSEEAEQREKEG 358
Query: 648 LVKQDTLILSQNKGNPKLKDLYIRPNIVTKRMSGSLEAHTNGFRF 692
VKQD LILSQNK NPKL +L I PNI+ K ++GSLEAHTNGFRF
Sbjct: 359 AVKQDKLILSQNKLNPKL-NLLICPNIIQKLITGSLEAHTNGFRF 402
Score = 116 bits (278), Expect = 1e-25
Identities = 75/237 (31%), Positives = 121/237 (51%), Gaps = 21/237 (8%)
Query: 30 KSDDALSKVDCLVSCVGVDEETLYSKSTSLQTWLFGYELPDTITVLTEHSMCFLASKKKI 89
K D L + L G + + Y+K++ L TWLFG+E+ DT+ +L + L S +K+
Sbjct: 8 KGADGLDSIKSLAFVYG-ETDNPYTKTSELFTWLFGHEIADTVLLLLNDHIYILGSNRKV 66
Query: 90 EFLRQIE-NGKDETELPPAKLLIRDRNDKDKENFNKLLQEIKKSKSGKTLGIFVKDNYPG 148
EF + + + ++P L+RD+ DKD NF KL+ IK +G +G FVK+ +
Sbjct: 67 EFFGSVTGDNQSSGKVPTVSTLLRDKTDKDAGNFEKLIDHIK--SAGGDVGNFVKEKFSS 124
Query: 149 EFCESW-KAVLKGEKSENVDVSSAIALLMAPKEDSEIITIKKACLVTVDVFTKYLKDQIM 207
EF SW KA+ +G ++N DV+ A L A K+D E+ I+K+ T +T + + +
Sbjct: 125 EFVSSWNKALEEGGVNKN-DVTLAFTHLFAVKDDKEMDLIRKSAQATTASWTA-ARARYV 182
Query: 208 EIIDSDK--------------KVKHSKLAEGVETAVSDKKYVTGVDTSQVDMCYPPI 250
EI D++K +V+HS L+ + D K + + D CY PI
Sbjct: 183 EISDNEKVLIVLKIVELGVLLRVRHSVLSNQFAAFMKDSKVQQALAKYEADTCYDPI 239
>L15314-4|AAF99988.2| 618|Caenorhabditis elegans Hypothetical
protein K06H7.3 protein.
Length = 618
Score = 35.9 bits (79), Expect = 0.16
Identities = 16/56 (28%), Positives = 32/56 (57%)
Query: 455 GRGKRTAVIESKLRTEHSSEEKRKEHQRELAISLNEKAKERLAKQSTGKDTEKLRK 510
G RT + E K + E + E++R++ +R+ +K KE+L K+ +D E++ +
Sbjct: 499 GNWARTHIPEPKKKVELTEEQEREQAERKKEKKARQKEKEKLKKEIAKRDVEEMEE 554
>U23168-5|ABD63247.1| 2702|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform e protein.
Length = 2702
Score = 35.1 bits (77), Expect = 0.29
Identities = 45/173 (26%), Positives = 75/173 (43%), Gaps = 22/173 (12%)
Query: 458 KRTAVIE----SKLRTEHSSEEKRKEHQR-ELAISLNEKAKERLAKQSTGKDTEKLRKST 512
K+T VIE S+++ EE+RKE +R A + EK E + K S G DT +
Sbjct: 2342 KKTTVIETEQASEVKMREKGEERRKEEKRVSFAAEVQEKTMEAIDK-SLGLDTSMEVEPA 2400
Query: 513 VSYKSISQMP----RENEVKELKLYVDRKYETV----ILPIFGVPVPFHISTIKNISQSV 564
SI + P RE ++L+ ++ V +L + P +I K + V
Sbjct: 2401 FQKPSIIKKPMKKERERRSRDLRQNAAPAFKPVRRNSLLQALAIGSPHNIPHFKTLDDIV 2460
Query: 565 EG-DYTYLRINFFHPGATMGRNEGGNYSQPDATFVKEVTYRSTNTKEPGEISP 616
+ + L + G ++ N+ Q + TF K R +T +P E++P
Sbjct: 2461 KAIKHAGLEYSNLIFGIDYTKS---NFYQGERTFDK----RPLHTIDPAEMNP 2506
>U23168-2|AAC38806.2| 1633|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform a protein.
Length = 1633
Score = 35.1 bits (77), Expect = 0.29
Identities = 45/173 (26%), Positives = 75/173 (43%), Gaps = 22/173 (12%)
Query: 458 KRTAVIE----SKLRTEHSSEEKRKEHQR-ELAISLNEKAKERLAKQSTGKDTEKLRKST 512
K+T VIE S+++ EE+RKE +R A + EK E + K S G DT +
Sbjct: 1273 KKTTVIETEQASEVKMREKGEERRKEEKRVSFAAEVQEKTMEAIDK-SLGLDTSMEVEPA 1331
Query: 513 VSYKSISQMP----RENEVKELKLYVDRKYETV----ILPIFGVPVPFHISTIKNISQSV 564
SI + P RE ++L+ ++ V +L + P +I K + V
Sbjct: 1332 FQKPSIIKKPMKKERERRSRDLRQNAAPAFKPVRRNSLLQALAIGSPHNIPHFKTLDDIV 1391
Query: 565 EG-DYTYLRINFFHPGATMGRNEGGNYSQPDATFVKEVTYRSTNTKEPGEISP 616
+ + L + G ++ N+ Q + TF K R +T +P E++P
Sbjct: 1392 KAIKHAGLEYSNLIFGIDYTKS---NFYQGERTFDK----RPLHTIDPAEMNP 1437
>U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform c protein.
Length = 7548
Score = 35.1 bits (77), Expect = 0.29
Identities = 45/173 (26%), Positives = 75/173 (43%), Gaps = 22/173 (12%)
Query: 458 KRTAVIE----SKLRTEHSSEEKRKEHQR-ELAISLNEKAKERLAKQSTGKDTEKLRKST 512
K+T VIE S+++ EE+RKE +R A + EK E + K S G DT +
Sbjct: 7188 KKTTVIETEQASEVKMREKGEERRKEEKRVSFAAEVQEKTMEAIDK-SLGLDTSMEVEPA 7246
Query: 513 VSYKSISQMP----RENEVKELKLYVDRKYETV----ILPIFGVPVPFHISTIKNISQSV 564
SI + P RE ++L+ ++ V +L + P +I K + V
Sbjct: 7247 FQKPSIIKKPMKKERERRSRDLRQNAAPAFKPVRRNSLLQALAIGSPHNIPHFKTLDDIV 7306
Query: 565 EG-DYTYLRINFFHPGATMGRNEGGNYSQPDATFVKEVTYRSTNTKEPGEISP 616
+ + L + G ++ N+ Q + TF K R +T +P E++P
Sbjct: 7307 KAIKHAGLEYSNLIFGIDYTKS---NFYQGERTFDK----RPLHTIDPAEMNP 7352
>Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical protein
C35C5.1 protein.
Length = 2962
Score = 33.5 bits (73), Expect = 0.88
Identities = 19/60 (31%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 474 EEKRKEHQRELAISLNEKAKERLAKQSTGKDTEKLRKSTVSYKSISQMPRENEVKELKLY 533
EEKR+E +R+LA ++ A++R ST + ++ + V ++I ++ RE+EV++ K +
Sbjct: 1072 EEKRRESRRKLA---DKYAEQRRMMASTRRLEKRTTQKQVDPETIQRLRREDEVRKRKRF 1128
>Z78417-12|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical
protein C35C5.1 protein.
Length = 2962
Score = 33.5 bits (73), Expect = 0.88
Identities = 19/60 (31%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 474 EEKRKEHQRELAISLNEKAKERLAKQSTGKDTEKLRKSTVSYKSISQMPRENEVKELKLY 533
EEKR+E +R+LA ++ A++R ST + ++ + V ++I ++ RE+EV++ K +
Sbjct: 1072 EEKRRESRRKLA---DKYAEQRRMMASTRRLEKRTTQKQVDPETIQRLRREDEVRKRKRF 1128
>AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein.
Length = 2962
Score = 33.5 bits (73), Expect = 0.88
Identities = 19/60 (31%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 474 EEKRKEHQRELAISLNEKAKERLAKQSTGKDTEKLRKSTVSYKSISQMPRENEVKELKLY 533
EEKR+E +R+LA ++ A++R ST + ++ + V ++I ++ RE+EV++ K +
Sbjct: 1072 EEKRRESRRKLA---DKYAEQRRMMASTRRLEKRTTQKQVDPETIQRLRREDEVRKRKRF 1128
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 33.1 bits (72), Expect = 1.2
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 466 KLRTEHSSEEKRKEHQRELAISLNEKAKERLAKQSTG-KDTEKLRKSTVSYKSISQMPRE 524
KL+ E S K K+ E A L+ + KE+ A++ TG + +K K + S +++ + P++
Sbjct: 9707 KLKLEEESAAKSKQTVEEQA-KLDAQTKEKTAEKQTGLEKDDKSTKDSESKETVDEKPKK 9765
Query: 525 NEVKE 529
+K+
Sbjct: 9766 KVLKK 9770
Score = 32.3 bits (70), Expect = 2.0
Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 466 KLRTEHSSEEKRKEHQRELAISLNEKAKERLAKQSTG-KDTEKLRKSTVSYKSISQMPRE 524
KL+ E S K K+ E A L+ + K + A++ TG + EK K + S +++ + P++
Sbjct: 9457 KLKLEEQSAAKSKQAAEEQA-KLDAQTKAKAAEKQTGLEKDEKSNKDSGSNETVEEKPKK 9515
Query: 525 NEVKE 529
+K+
Sbjct: 9516 KVLKK 9520
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 33.1 bits (72), Expect = 1.2
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 466 KLRTEHSSEEKRKEHQRELAISLNEKAKERLAKQSTG-KDTEKLRKSTVSYKSISQMPRE 524
KL+ E S K K+ E A L+ + KE+ A++ TG + +K K + S +++ + P++
Sbjct: 9727 KLKLEEESAAKSKQTVEEQA-KLDAQTKEKTAEKQTGLEKDDKSTKDSESKETVDEKPKK 9785
Query: 525 NEVKE 529
+K+
Sbjct: 9786 KVLKK 9790
Score = 32.3 bits (70), Expect = 2.0
Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 466 KLRTEHSSEEKRKEHQRELAISLNEKAKERLAKQSTG-KDTEKLRKSTVSYKSISQMPRE 524
KL+ E S K K+ E A L+ + K + A++ TG + EK K + S +++ + P++
Sbjct: 9477 KLKLEEQSAAKSKQAAEEQA-KLDAQTKAKAAEKQTGLEKDEKSNKDSGSNETVEEKPKK 9535
Query: 525 NEVKE 529
+K+
Sbjct: 9536 KVLKK 9540
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 33.1 bits (72), Expect = 1.2
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 466 KLRTEHSSEEKRKEHQRELAISLNEKAKERLAKQSTG-KDTEKLRKSTVSYKSISQMPRE 524
KL+ E S K K+ E A L+ + KE+ A++ TG + +K K + S +++ + P++
Sbjct: 9727 KLKLEEESAAKSKQTVEEQA-KLDAQTKEKTAEKQTGLEKDDKSTKDSESKETVDEKPKK 9785
Query: 525 NEVKE 529
+K+
Sbjct: 9786 KVLKK 9790
Score = 32.3 bits (70), Expect = 2.0
Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 466 KLRTEHSSEEKRKEHQRELAISLNEKAKERLAKQSTG-KDTEKLRKSTVSYKSISQMPRE 524
KL+ E S K K+ E A L+ + K + A++ TG + EK K + S +++ + P++
Sbjct: 9477 KLKLEEQSAAKSKQAAEEQA-KLDAQTKAKAAEKQTGLEKDEKSNKDSGSNETVEEKPKK 9535
Query: 525 NEVKE 529
+K+
Sbjct: 9536 KVLKK 9540
>U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical protein
C32E12.4 protein.
Length = 1553
Score = 32.3 bits (70), Expect = 2.0
Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Query: 464 ESKLRTEHSSEEKRKEHQRELAISLNEKAKERLAKQ------STGK-DTEKLRKSTVSYK 516
E K + + EE++K ++EL + N++ +E+L K + GK D LRKS ++ K
Sbjct: 1007 EEKRKKKQEEEEEKKRKEKELEMKKNKEEEEKLKKDIEAKSLAAGKEDKSALRKSALNMK 1066
Query: 517 SISQMPRENEVKELKLYVDRKYETV 541
+ +++ R++ TV
Sbjct: 1067 DEDAKKKVATDEKVAAQKARRFGTV 1091
>AF077529-1|AAC26253.1| 690|Caenorhabditis elegans Hypothetical
protein C09E8.3 protein.
Length = 690
Score = 32.3 bits (70), Expect = 2.0
Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 14/116 (12%)
Query: 453 ILGRGKRTAV-IESKLRTEHSSEEKRKEHQRELAISLNEKAKERL-AKQSTGKDTEKLRK 510
ILG +++ + + L +S E+K+K + A L EK ERL K+S K T+ L+K
Sbjct: 419 ILGNEEKSKIEVFEDLDKSYSEEQKKKLNDDGFAF-LTEKQMERLYGKESPYKHTKALKK 477
Query: 511 STVSYKSISQMPR---ENEVKEL----KLYVDRKYETVILPIFGVPVPFHISTIKN 559
+K + P E +++ L K V R+ + V P P+ F + + N
Sbjct: 478 ----FKRLRDDPEKYIEKDIRALAEAEKFRVARRADIVSSPFILTPLTFASAPLSN 529
>AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical
protein E01A2.4 protein.
Length = 504
Score = 31.9 bits (69), Expect = 2.7
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 464 ESKLRTEHSSEEKRKEHQREL-AISLNEKAKERLAKQSTGKDTEKLRKSTVSYKSISQMP 522
E++ + E E++RKE +RE+ A+ + + +S D E+ +K V S+
Sbjct: 246 ENEKKREELKEDRRKEKKREMRAVRNVSEDDSSTSSESEESDFEQKKKKKVKKSKKSKKD 305
Query: 523 RENEVKELK 531
++ E KE K
Sbjct: 306 KKKEKKEKK 314
>L13200-8|AAA28188.2| 324|Caenorhabditis elegans Hypothetical
protein ZK1236.7 protein.
Length = 324
Score = 31.5 bits (68), Expect = 3.5
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 464 ESKLRTEHSSEEKRKEHQRELAISLNEKAKERLAKQSTGKDTEKLRKSTVSYKSISQMPR 523
E +LR E E++RKEH+ LA+ + +E G++ E L + V Y +++
Sbjct: 185 EERLRKERE-EKERKEHEEYLAMKASFAIEEEGTDAIEGEEAENLIRDFVDYVKTNKVVN 243
Query: 524 ENEV 527
+E+
Sbjct: 244 IDEL 247
>Z79755-11|CAB02109.1| 2034|Caenorhabditis elegans Hypothetical
protein F43G9.6 protein.
Length = 2034
Score = 31.1 bits (67), Expect = 4.7
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 86 KKKIEFLRQIENGKDETELPPAKLLIRDRNDKDKE--NFNKLLQEIKKSKSGKTLG 139
+K ++ ++ + G +++ RD +D D E N +K + KKSKSGK+ G
Sbjct: 5 EKLLKVKQKFKRGDSSSDVDSGPERDRDEDDSDNESRNTSKTSKSSKKSKSGKSTG 60
>U67949-5|AAB07566.1| 705|Caenorhabditis elegans Hypothetical
protein F55A4.5 protein.
Length = 705
Score = 31.1 bits (67), Expect = 4.7
Identities = 14/44 (31%), Positives = 26/44 (59%)
Query: 458 KRTAVIESKLRTEHSSEEKRKEHQRELAISLNEKAKERLAKQST 501
K+ A++E K+R S+E R+ E + L+E+A+ L ++T
Sbjct: 580 KKDAIVEGKIRRLKRSKENRRALTAEQIVELSERAQSYLQTKNT 623
>U57652-1|AAB02243.1| 2034|Caenorhabditis elegans FER-1 protein.
Length = 2034
Score = 31.1 bits (67), Expect = 4.7
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 86 KKKIEFLRQIENGKDETELPPAKLLIRDRNDKDKE--NFNKLLQEIKKSKSGKTLG 139
+K ++ ++ + G +++ RD +D D E N +K + KKSKSGK+ G
Sbjct: 5 EKLLKVKQKFKRGDSSSDVDSGPERDRDEDDSDNESRNTSKTSKSSKKSKSGKSTG 60
>U23452-4|ABE73334.1| 1316|Caenorhabditis elegans Hypothetical
protein R07G3.3c protein.
Length = 1316
Score = 31.1 bits (67), Expect = 4.7
Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 164 ENVDVSSAIALLMAPKEDSEIITIKKACLV-TVDVFTKYLKDQIMEIIDSDKKVKHSKLA 222
+N+++ + ++ L KE+ + + L T V T LKD+I ++ + ++HSK A
Sbjct: 90 KNLELETVVSRLKIEKEERDAAVVNATKLAQTAQVETFALKDEIKKLTNEQASLRHSKEA 149
>U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical
protein R07G3.3a protein.
Length = 1982
Score = 31.1 bits (67), Expect = 4.7
Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 164 ENVDVSSAIALLMAPKEDSEIITIKKACLV-TVDVFTKYLKDQIMEIIDSDKKVKHSKLA 222
+N+++ + ++ L KE+ + + L T V T LKD+I ++ + ++HSK A
Sbjct: 90 KNLELETVVSRLKIEKEERDAAVVNATKLAQTAQVETFALKDEIKKLTNEQASLRHSKEA 149
>U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical
protein R07G3.3b protein.
Length = 1987
Score = 31.1 bits (67), Expect = 4.7
Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 164 ENVDVSSAIALLMAPKEDSEIITIKKACLV-TVDVFTKYLKDQIMEIIDSDKKVKHSKLA 222
+N+++ + ++ L KE+ + + L T V T LKD+I ++ + ++HSK A
Sbjct: 90 KNLELETVVSRLKIEKEERDAAVVNATKLAQTAQVETFALKDEIKKLTNEQASLRHSKEA 149
>AC006790-7|AAF60731.1| 547|Caenorhabditis elegans Suppressor of
mec and unc defectsprotein 2 protein.
Length = 547
Score = 31.1 bits (67), Expect = 4.7
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Query: 456 RGKRTAVIESKLRTEHSSEEKRKEHQRELAISLNEKAKER--LAKQSTGKDTEKLRK 510
R R E + E+ R+E QRE + E+ +ER +Q K+ EK RK
Sbjct: 364 RDNRDRYFEKSANSRREEEQNRREQQRERERAEQERRREREKEREQEKAKEREKKRK 420
>U64441-1|AAB06457.1| 549|Caenorhabditis elegans nonsense-mediated
mRNA decay proteinprotein.
Length = 549
Score = 30.3 bits (65), Expect = 8.2
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Query: 85 SKKKIEFLRQIENGKDETELPPAKLLIRDRNDKDKENFNKLLQEIKKSKSGKTLGIFVKD 144
S+ +EFL Q+ N E PP +++ D+E LL+ I +S+ K L I +K
Sbjct: 361 SEPNVEFLSQLINYLVSVEFPPMEII------HDREESGPLLRRINQSEQ-KRLDIQIKT 413
Query: 145 NYPGEFCESWKAV 157
E W+ V
Sbjct: 414 QNDEVNREDWRPV 426
>U64440-1|AAB06456.1| 549|Caenorhabditis elegans nonsense-mediated
mRNA decay proteinprotein.
Length = 549
Score = 30.3 bits (65), Expect = 8.2
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Query: 85 SKKKIEFLRQIENGKDETELPPAKLLIRDRNDKDKENFNKLLQEIKKSKSGKTLGIFVKD 144
S+ +EFL Q+ N E PP +++ D+E LL+ I +S+ K L I +K
Sbjct: 361 SEPNVEFLSQLINYLVSVEFPPMEII------HDREESGPLLRRINQSEQ-KRLDIQIKT 413
Query: 145 NYPGEFCESWKAV 157
E W+ V
Sbjct: 414 QNDEVNREDWRPV 426
>U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction
molecule protein1, isoform b protein.
Length = 944
Score = 30.3 bits (65), Expect = 8.2
Identities = 18/81 (22%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 463 IESKLRTEHSSEEKRKEHQRELAISLNEKAKERLAKQSTGKDTEKLRKSTVSYKSI--SQ 520
+E + R EE+R+E + + + +ERL K+ ++ E+L + + + I +
Sbjct: 495 LEDEAREMRRREEERREAELVADVHRQAEERERLRKRQEREEAERLERIRLEQQKIDMER 554
Query: 521 MPRENEVKELKLYVDRKYETV 541
+ E +E K R++E +
Sbjct: 555 IDAERRERERKEEERREFELI 575
>U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction
molecule protein1, isoform c protein.
Length = 1148
Score = 30.3 bits (65), Expect = 8.2
Identities = 18/81 (22%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 463 IESKLRTEHSSEEKRKEHQRELAISLNEKAKERLAKQSTGKDTEKLRKSTVSYKSI--SQ 520
+E + R EE+R+E + + + +ERL K+ ++ E+L + + + I +
Sbjct: 495 LEDEAREMRRREEERREAELVADVHRQAEERERLRKRQEREEAERLERIRLEQQKIDMER 554
Query: 521 MPRENEVKELKLYVDRKYETV 541
+ E +E K R++E +
Sbjct: 555 IDAERRERERKEEERREFELI 575
>U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction
molecule protein1, isoform d protein.
Length = 1439
Score = 30.3 bits (65), Expect = 8.2
Identities = 18/81 (22%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 463 IESKLRTEHSSEEKRKEHQRELAISLNEKAKERLAKQSTGKDTEKLRKSTVSYKSI--SQ 520
+E + R EE+R+E + + + +ERL K+ ++ E+L + + + I +
Sbjct: 495 LEDEAREMRRREEERREAELVADVHRQAEERERLRKRQEREEAERLERIRLEQQKIDMER 554
Query: 521 MPRENEVKELKLYVDRKYETV 541
+ E +E K R++E +
Sbjct: 555 IDAERRERERKEEERREFELI 575
>U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction
molecule protein1, isoform a protein.
Length = 1480
Score = 30.3 bits (65), Expect = 8.2
Identities = 18/81 (22%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 463 IESKLRTEHSSEEKRKEHQRELAISLNEKAKERLAKQSTGKDTEKLRKSTVSYKSI--SQ 520
+E + R EE+R+E + + + +ERL K+ ++ E+L + + + I +
Sbjct: 495 LEDEAREMRRREEERREAELVADVHRQAEERERLRKRQEREEAERLERIRLEQQKIDMER 554
Query: 521 MPRENEVKELKLYVDRKYETV 541
+ E +E K R++E +
Sbjct: 555 IDAERRERERKEEERREFELI 575
>AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein.
Length = 4250
Score = 30.3 bits (65), Expect = 8.2
Identities = 17/57 (29%), Positives = 27/57 (47%)
Query: 513 VSYKSISQMPRENEVKELKLYVDRKYETVILPIFGVPVPFHISTIKNISQSVEGDYT 569
VSY+ S R+ + EL+ ++ R E + LP P P + ++ Q E D T
Sbjct: 3043 VSYEWQSTAERKERITELEDWIHRPKEDLNLPAVDYPAPSFSQGLTDLGQLNEADAT 3099
>AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein.
Length = 1359
Score = 30.3 bits (65), Expect = 8.2
Identities = 39/181 (21%), Positives = 74/181 (40%), Gaps = 11/181 (6%)
Query: 472 SSEEKRKEHQRELAISLNEKAKERLAKQSTGKDTEKLRKSTVSYKSISQMPRENEVKELK 531
S E E ++E+ S +K+K+ + K+S +D +K T K E+ E
Sbjct: 206 SESESESEDEKEVKKS-KKKSKKVVKKESESEDEAPEKKKTEKRKRSKTSSEESSESEKS 264
Query: 532 LYVDRKYETVILPIFGVPVPFHISTIKNISQSVEGDYTYLRINFFHPGATM---GRNEGG 588
+ + E+ P P + + + +S E D L T+ +E
Sbjct: 265 DEEEEEKESSPKP--KKKKPLAVKKLSSDEESEESDVEVLPQKKKRGAVTLISDSEDEKD 322
Query: 589 NYSQPDATFVKEVTYRSTNTKEPGEISPPSSNLNTGFRLIKEVQKKFKTREAEEREKEDL 648
S+ +A+ V+E + K+ E S S+ + G V +K K +E E++K+ +
Sbjct: 323 QKSESEASDVEEKVSKKKAKKQ--ESSESGSDSSEG---SITVNRKSKKKEKPEKKKKGI 377
Query: 649 V 649
+
Sbjct: 378 I 378
Score = 30.3 bits (65), Expect = 8.2
Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Query: 462 VIESKLRTEHSSEEKRKEHQRELAISLNEKAKERLAKQSTG--KDTEKLRKSTVSYKSIS 519
V + K + + SSE + + ++ K KE+ K+ G D+ KL+K T+ +
Sbjct: 336 VSKKKAKKQESSESGSDSSEGSITVNRKSKKKEKPEKKKKGIIMDSSKLQKETIDAERAE 395
Query: 520 QMPRENEVKELK 531
+ R+ K+ K
Sbjct: 396 KERRKRLEKKQK 407
>AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform b protein.
Length = 4203
Score = 30.3 bits (65), Expect = 8.2
Identities = 17/57 (29%), Positives = 27/57 (47%)
Query: 513 VSYKSISQMPRENEVKELKLYVDRKYETVILPIFGVPVPFHISTIKNISQSVEGDYT 569
VSY+ S R+ + EL+ ++ R E + LP P P + ++ Q E D T
Sbjct: 2960 VSYEWQSTAERKERITELEDWIHRPKEDLNLPAVDYPAPSFSQGLTDLGQLNEADAT 3016
>AF106579-3|AAM45364.1| 4369|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform d protein.
Length = 4369
Score = 30.3 bits (65), Expect = 8.2
Identities = 17/57 (29%), Positives = 27/57 (47%)
Query: 513 VSYKSISQMPRENEVKELKLYVDRKYETVILPIFGVPVPFHISTIKNISQSVEGDYT 569
VSY+ S R+ + EL+ ++ R E + LP P P + ++ Q E D T
Sbjct: 3281 VSYEWQSTAERKERITELEDWIHRPKEDLNLPAVDYPAPSFSQGLTDLGQLNEADAT 3337
>AF106579-2|AAM45363.1| 4447|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform c protein.
Length = 4447
Score = 30.3 bits (65), Expect = 8.2
Identities = 17/57 (29%), Positives = 27/57 (47%)
Query: 513 VSYKSISQMPRENEVKELKLYVDRKYETVILPIFGVPVPFHISTIKNISQSVEGDYT 569
VSY+ S R+ + EL+ ++ R E + LP P P + ++ Q E D T
Sbjct: 3281 VSYEWQSTAERKERITELEDWIHRPKEDLNLPAVDYPAPSFSQGLTDLGQLNEADAT 3337
>AF106579-1|AAC78200.4| 4889|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform a protein.
Length = 4889
Score = 30.3 bits (65), Expect = 8.2
Identities = 17/57 (29%), Positives = 27/57 (47%)
Query: 513 VSYKSISQMPRENEVKELKLYVDRKYETVILPIFGVPVPFHISTIKNISQSVEGDYT 569
VSY+ S R+ + EL+ ++ R E + LP P P + ++ Q E D T
Sbjct: 3682 VSYEWQSTAERKERITELEDWIHRPKEDLNLPAVDYPAPSFSQGLTDLGQLNEADAT 3738
>AF067220-1|AAK84500.1| 1014|Caenorhabditis elegans Hypothetical
protein C33E10.6 protein.
Length = 1014
Score = 30.3 bits (65), Expect = 8.2
Identities = 37/176 (21%), Positives = 70/176 (39%), Gaps = 10/176 (5%)
Query: 63 LFGYELPDTITVLTEHSMCFLASKKKIEFLRQIENGKDETELPPAKLLIRDRNDKDKENF 122
L+G+ + I L ++ F +K + E R I ++ + +++++ + E
Sbjct: 549 LYGWAM---IQKLPYDNIKFEMNKNEFEDFRDILKNLEDQKTEVQNSEVQNKDKEVNEIN 605
Query: 123 NKLLQEIKKSKSGKTLGIFVKDNYPGEFCESWKAVLKGEKSENVDVSSAIALLMAPKEDS 182
NK++Q +KK + K LG F E K V+ + K
Sbjct: 606 NKIIQHLKKIINAKELGEFTLP----MLNECIKEVISNDNENKTIEYQNFDERELRKYIE 661
Query: 183 EIITIKKACLVTVDV-FTKYLKD--QIMEIIDSDKKVKHSKLAEGVETAVSDKKYV 235
+ I K C++ VD+ + K + D + KV + K + + T +KYV
Sbjct: 662 NLNEIGKGCILEVDLEYPKDIHDLHNDFPFYPQNTKVNNQKTCKLMNTLFDKEKYV 717
>AF024502-4|AAB70374.1| 675|Caenorhabditis elegans Hypothetical
protein M151.2 protein.
Length = 675
Score = 30.3 bits (65), Expect = 8.2
Identities = 22/103 (21%), Positives = 47/103 (45%), Gaps = 7/103 (6%)
Query: 466 KLRTEHSSEEKRKEHQREL-AISLNEKAKERLAKQSTGKDTEKLRKSTVSYKSISQ-MPR 523
KLR + ++ +K H++E+ A+ + K + K+ E+ K + + Q +
Sbjct: 260 KLRMDQFEDDTKKRHKKEIKALEVEVKKRNATIKEHQVAAQERRAKHDAEVEELEQKLAT 319
Query: 524 ENE-----VKELKLYVDRKYETVILPIFGVPVPFHISTIKNIS 561
E E V++++ +D + + P + +P H ST +S
Sbjct: 320 EEEKCRRIVQDIREKLDAQLPMGLPPFVPMDIPDHASTAPLVS 362
>AF003141-6|AAK21489.1| 549|Caenorhabditis elegans Suppressor with
morphological effecton genitalia protein 5 protein.
Length = 549
Score = 30.3 bits (65), Expect = 8.2
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Query: 85 SKKKIEFLRQIENGKDETELPPAKLLIRDRNDKDKENFNKLLQEIKKSKSGKTLGIFVKD 144
S+ +EFL Q+ N E PP +++ D+E LL+ I +S+ K L I +K
Sbjct: 361 SEPNVEFLSQLINYLVSVEFPPMEII------HDREESGPLLRRINQSEQ-KRLDIQIKT 413
Query: 145 NYPGEFCESWKAV 157
E W+ V
Sbjct: 414 QNDEVNREDWRPV 426
>AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp gene
related protein 1 protein.
Length = 1359
Score = 30.3 bits (65), Expect = 8.2
Identities = 39/181 (21%), Positives = 74/181 (40%), Gaps = 11/181 (6%)
Query: 472 SSEEKRKEHQRELAISLNEKAKERLAKQSTGKDTEKLRKSTVSYKSISQMPRENEVKELK 531
S E E ++E+ S +K+K+ + K+S +D +K T K E+ E
Sbjct: 206 SESESESEDEKEVKKS-KKKSKKVVKKESESEDEAPEKKKTEKRKRSKTSSEESSESEKS 264
Query: 532 LYVDRKYETVILPIFGVPVPFHISTIKNISQSVEGDYTYLRINFFHPGATM---GRNEGG 588
+ + E+ P P + + + +S E D L T+ +E
Sbjct: 265 DEEEEEKESSPKP--KKKKPLAVKKLSSDEESEESDVEVLPQKKKRGAVTLISDSEDEKD 322
Query: 589 NYSQPDATFVKEVTYRSTNTKEPGEISPPSSNLNTGFRLIKEVQKKFKTREAEEREKEDL 648
S+ +A+ V+E + K+ E S S+ + G V +K K +E E++K+ +
Sbjct: 323 QKSESEASDVEEKVSKKKAKKQ--ESSESGSDSSEG---SITVNRKSKKKEKPEKKKKGI 377
Query: 649 V 649
+
Sbjct: 378 I 378
Score = 30.3 bits (65), Expect = 8.2
Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Query: 462 VIESKLRTEHSSEEKRKEHQRELAISLNEKAKERLAKQSTG--KDTEKLRKSTVSYKSIS 519
V + K + + SSE + + ++ K KE+ K+ G D+ KL+K T+ +
Sbjct: 336 VSKKKAKKQESSESGSDSSEGSITVNRKSKKKEKPEKKKKGIIMDSSKLQKETIDAERAE 395
Query: 520 QMPRENEVKELK 531
+ R+ K+ K
Sbjct: 396 KERRKRLEKKQK 407
>AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein.
Length = 4219
Score = 30.3 bits (65), Expect = 8.2
Identities = 17/57 (29%), Positives = 27/57 (47%)
Query: 513 VSYKSISQMPRENEVKELKLYVDRKYETVILPIFGVPVPFHISTIKNISQSVEGDYT 569
VSY+ S R+ + EL+ ++ R E + LP P P + ++ Q E D T
Sbjct: 2976 VSYEWQSTAERKERITELEDWIHRPKEDLNLPAVDYPAPSFSQGLTDLGQLNEADAT 3032
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.315 0.132 0.375
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,594,081
Number of Sequences: 27539
Number of extensions: 1005623
Number of successful extensions: 3906
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 3748
Number of HSP's gapped (non-prelim): 177
length of query: 1136
length of database: 12,573,161
effective HSP length: 89
effective length of query: 1047
effective length of database: 10,122,190
effective search space: 10597932930
effective search space used: 10597932930
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 65 (30.3 bits)
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