Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002777-TA|BGIBMGA002777-PA|undefined
         (61 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   1.5  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    20   2.0  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    20   2.7  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    19   4.7  
X02007-1|CAA26038.1|   70|Apis mellifera prepromelittin protein.       19   6.2  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    19   6.2  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    19   6.2  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 20.6 bits (41), Expect = 1.5
 Identities = 8/13 (61%), Positives = 10/13 (76%)

Query: 32  KRPGLSKNLIPNK 44
           K+ GL  NLIP+K
Sbjct: 186 KKGGLKDNLIPDK 198


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 20.2 bits (40), Expect = 2.0
 Identities = 11/34 (32%), Positives = 16/34 (47%)

Query: 27  NKKKLKRPGLSKNLIPNKKVIKMYKEQKARDGKK 60
           NKK +     +K L+P  K   + KEQ     K+
Sbjct: 755 NKKNVGSMSRNKALLPVIKPANVNKEQSPNSTKE 788


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 19.8 bits (39), Expect = 2.7
 Identities = 8/31 (25%), Positives = 19/31 (61%)

Query: 26  VNKKKLKRPGLSKNLIPNKKVIKMYKEQKAR 56
           + +K +K  G++K+   +  V+K+  + +AR
Sbjct: 313 IKEKLVKDSGVAKDAAYDNIVLKLLTKPRAR 343


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 19.0 bits (37), Expect = 4.7
 Identities = 8/19 (42%), Positives = 13/19 (68%)

Query: 24  GGVNKKKLKRPGLSKNLIP 42
           G  NK++LKR   + +L+P
Sbjct: 546 GETNKQELKRLKSTVSLLP 564


>X02007-1|CAA26038.1|   70|Apis mellifera prepromelittin protein.
          Length = 70

 Score = 18.6 bits (36), Expect = 6.2
 Identities = 7/16 (43%), Positives = 9/16 (56%)

Query: 3  AAPPPEATLDPVSNTD 18
          AAP PE   +P +  D
Sbjct: 21 AAPEPEPAPEPEAEAD 36


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 18.6 bits (36), Expect = 6.2
 Identities = 5/16 (31%), Positives = 9/16 (56%)

Query: 22  WEGGVNKKKLKRPGLS 37
           W G + K+K  R  ++
Sbjct: 868 WRGAIEKRKTLRASIA 883


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 18.6 bits (36), Expect = 6.2
 Identities = 9/20 (45%), Positives = 11/20 (55%)

Query: 38  KNLIPNKKVIKMYKEQKARD 57
           KN   NK  +K  KEQ A +
Sbjct: 146 KNAGNNKITMKSKKEQNAEE 165


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.309    0.131    0.377 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,265
Number of Sequences: 429
Number of extensions: 635
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of query: 61
length of database: 140,377
effective HSP length: 41
effective length of query: 20
effective length of database: 122,788
effective search space:  2455760
effective search space used:  2455760
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.5 bits)
S2: 35 (18.2 bits)