GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002777-TA|BGIBMGA002777-PA|undefined
         (61 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    21   0.96 
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         21   0.96 
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    20   2.2  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    19   2.9  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           19   5.1  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    19   5.1  
DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    18   6.8  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    18   9.0  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    18   9.0  

>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
          protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 0.96
 Identities = 13/37 (35%), Positives = 17/37 (45%)

Query: 11 LDPVSNTDDVIWEGGVNKKKLKRPGLSKNLIPNKKVI 47
          LD   N   +  E  +N+  LKR    K   PN KV+
Sbjct: 62 LDKDCNIQVLDEENDINQGGLKRVSALKEKNPNLKVM 98


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 21.0 bits (42), Expect = 0.96
 Identities = 8/25 (32%), Positives = 12/25 (48%)

Query: 4  APPPEATLDPVSNTDDVIWEGGVNK 28
          +PPPE    P+      +WE  + K
Sbjct: 6  SPPPEMMGKPIHEEVAQVWEQTLQK 30


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 19.8 bits (39), Expect = 2.2
 Identities = 7/12 (58%), Positives = 8/12 (66%)

Query: 2   TAAPPPEATLDP 13
           T +PPPE  L P
Sbjct: 100 TPSPPPEERLTP 111


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 19.4 bits (38), Expect = 2.9
 Identities = 7/15 (46%), Positives = 11/15 (73%)

Query: 9   ATLDPVSNTDDVIWE 23
           ATLD + N D +++E
Sbjct: 229 ATLDFLDNVDTIMYE 243


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 18.6 bits (36), Expect = 5.1
 Identities = 8/17 (47%), Positives = 10/17 (58%)

Query: 4  APPPEATLDPVSNTDDV 20
          AP PE T   V+N  D+
Sbjct: 51 APAPERTSVLVTNNSDL 67


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 18.6 bits (36), Expect = 5.1
 Identities = 7/22 (31%), Positives = 11/22 (50%)

Query: 3   AAPPPEATLDPVSNTDDVIWEG 24
           AA    + L P +N+   +W G
Sbjct: 291 AAVAAASNLSPKTNSSPDLWNG 312



 Score = 18.6 bits (36), Expect = 5.1
 Identities = 7/14 (50%), Positives = 8/14 (57%)

Query: 2    TAAPPPEATLDPVS 15
            TA PPP  +  P S
Sbjct: 1109 TAVPPPSGSSGPGS 1122


>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
           protein 7 protein.
          Length = 127

 Score = 18.2 bits (35), Expect = 6.8
 Identities = 6/18 (33%), Positives = 14/18 (77%)

Query: 44  KKVIKMYKEQKARDGKKI 61
           +KVI+   +++ARD +++
Sbjct: 86  EKVIRHLTQKRARDWERL 103


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 17.8 bits (34), Expect = 9.0
 Identities = 6/14 (42%), Positives = 8/14 (57%)

Query: 18  DDVIWEGGVNKKKL 31
           DD +W G  N K +
Sbjct: 318 DDTLWVGFDNPKSV 331


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 17.8 bits (34), Expect = 9.0
 Identities = 6/20 (30%), Positives = 13/20 (65%)

Query: 33  RPGLSKNLIPNKKVIKMYKE 52
           RP   +NL+ N+ +I + ++
Sbjct: 267 RPDPPQNLVINESIIDLSQQ 286


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.309    0.131    0.377 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,332
Number of Sequences: 317
Number of extensions: 529
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of query: 61
length of database: 114,650
effective HSP length: 41
effective length of query: 20
effective length of database: 101,653
effective search space:  2033060
effective search space used:  2033060
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.1 bits)
S2: 34 (17.8 bits)