GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002777-TA|BGIBMGA002777-PA|undefined
         (61 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    21   5.7  
AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein p...    20   7.5  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    20   9.9  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 20.6 bits (41), Expect = 5.7
 Identities = 7/21 (33%), Positives = 11/21 (52%)

Query: 1   MTAAPPPEATLDPVSNTDDVI 21
           M   PPP +    V + +DV+
Sbjct: 340 MGGGPPPSSATPSVDDDEDVV 360


>AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein
           protein.
          Length = 344

 Score = 20.2 bits (40), Expect = 7.5
 Identities = 9/23 (39%), Positives = 14/23 (60%), Gaps = 1/23 (4%)

Query: 23  EGGVNKKKLKRPGLSKNLIPNKK 45
           EG +NK+K K+    +N  P K+
Sbjct: 95  EGSINKRKKKKSKKKQNK-PRKR 116


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 19.8 bits (39), Expect = 9.9
 Identities = 7/16 (43%), Positives = 9/16 (56%)

Query: 4   APPPEATLDPVSNTDD 19
           AP P+A   P  +T D
Sbjct: 185 APAPKAPCQPAGSTSD 200


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.309    0.131    0.377 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,518
Number of Sequences: 2123
Number of extensions: 1959
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 61
length of database: 516,269
effective HSP length: 40
effective length of query: 21
effective length of database: 431,349
effective search space:  9058329
effective search space used:  9058329
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.3 bits)
S2: 39 (19.8 bits)