GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002774-TA|BGIBMGA002774-PA|undefined
         (204 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-1635|AAF54909.1|  233|Drosophila melanogaster CG8138-PA...    84   1e-16
AE014134-941|AAF52267.1|  238|Drosophila melanogaster CG14017-PA...    79   4e-15
BT011401-1|AAR96193.1|  241|Drosophila melanogaster AT24369p pro...    68   8e-12
AE014134-940|AAF52266.1|  241|Drosophila melanogaster CG14013-PA...    68   8e-12
AE014134-425|AAF51245.1|  235|Drosophila melanogaster CG3528-PA ...    61   1e-09

>AE014297-1635|AAF54909.1|  233|Drosophila melanogaster CG8138-PA
           protein.
          Length = 233

 Score = 83.8 bits (198), Expect = 1e-16
 Identities = 52/175 (29%), Positives = 81/175 (46%), Gaps = 8/175 (4%)

Query: 17  DRRLLPFVTWEEYLDSLIDIADLRNLRSTAAARTVAALGYRANGDTLSEKEFYTRRAVIN 76
           D  +  F  ++EYL S   + D R L       T+  LGYR +     E EF   +  + 
Sbjct: 3   DFSIAKFNNYQEYLHSFTTVEDFRYLPFHKTVITLTKLGYREHRTFYEEDEFLNVKKQVE 62

Query: 77  EIVYPTVKAYVLVSEGVVIDDPFSRELAIRERANRVGILQSIIFIRHFTKGGFEISGYID 136
           +++ PTV A +  S+     DP    LA RE  N    + +IIF+    + GF  SGYID
Sbjct: 63  QLLNPTVSAQIYYSQYFKGTDPALWALAEREHGNVQQEISTIIFLEISGRSGFSKSGYID 122

Query: 137 YA-----HRLVSEN---WAQFFRSKKMLWPRDKDLGYYHWRHGTVRSNISRNYKI 183
           +      +R    N   W   F  +K+L P+  D+ +Y W+   + +N + NY +
Sbjct: 123 FEASLRNYRFKGPNAVDWKAVFEERKLLKPQPSDIVFYDWKTRKIFANDNDNYTV 177


>AE014134-941|AAF52267.1|  238|Drosophila melanogaster CG14017-PA,
           isoform A protein.
          Length = 238

 Score = 79.0 bits (186), Expect = 4e-15
 Identities = 55/198 (27%), Positives = 87/198 (43%), Gaps = 16/198 (8%)

Query: 1   MAMAEKKNEYPPGVEADRRLLPFVTWEEYLDSLIDIADLRNLRSTAAARTVAALGYRANG 60
           M  +++K+    G  A       + +  YL+S + + D R L +      +  L      
Sbjct: 1   MEDSQRKHAGSKGFRALENRKQDIAYNHYLNSFVKLEDRRYLPNDNVIHQLVPLRAAVGT 60

Query: 61  DTLSEKEFYTRRAVINEIVYPTVKAYVLVSEGVVIDDPFSRELAIRERANRVGILQSIIF 120
             ++  +F       NE+ +  +      SE  V +DP +  L  RE+ N    + +I+F
Sbjct: 61  IVMTPTQF-------NEVHFSPLGTCFYFSENNVPNDPLTMALLEREKLNATKTISTIVF 113

Query: 121 IRHFTKGGFEISGYIDYAHRL--------VSENWAQFFRSKKMLWPRDKDLGYYHWRHGT 172
           +      GF ISGYID  H L         S  WA  F  ++ L P  +DL + +W +G 
Sbjct: 114 VSTRDSKGFNISGYIDLEHSLRRYKTAGSKSHPWADIFAGRRRLEPNHQDLSFINWSNGR 173

Query: 173 VRSNISRNYK-IPNKTQG 189
           V SN S NYK IP+  +G
Sbjct: 174 VHSNDSDNYKVIPDAVKG 191


>BT011401-1|AAR96193.1|  241|Drosophila melanogaster AT24369p
           protein.
          Length = 241

 Score = 68.1 bits (159), Expect = 8e-12
 Identities = 49/181 (27%), Positives = 77/181 (42%), Gaps = 10/181 (5%)

Query: 13  GVEADRRLLPFVTWEEYLDSLIDIADLRNLRSTAAARTVAALGYRANGDTLSEKEFYTRR 72
           G   D  +L F  + +Y+ S   + D R L +    +T+  LGYR      + +E+  R 
Sbjct: 5   GKSVDFSVLEFDNYNDYISSFATVTDHRYLGNQNTIKTIVQLGYRTTKIPYTAEEYEKRV 64

Query: 73  AVINEIVYPTVKAYVLVSE--GVVIDDPFSRELAIRERANRVGILQSIIFIRHFTKGGFE 130
            +  E + P +    L S+       DP   E   RE  N   IL +I+F  +    G E
Sbjct: 65  DLALEAIRPKLAHVGLFSDLLSPTNRDPVLLEFKARELLNLNKILSTIVFTSYIHMDGSE 124

Query: 131 ISGYID--------YAHRLVSENWAQFFRSKKMLWPRDKDLGYYHWRHGTVRSNISRNYK 182
           ISGYID        +   +   +W   F+ +  L P    L Y + R+  V+   S NY+
Sbjct: 125 ISGYIDLDMSWRNCFREAIKHTDWRGVFQGRSRLKPMPHHLSYSNPRYNVVKYTDSDNYQ 184

Query: 183 I 183
           +
Sbjct: 185 V 185


>AE014134-940|AAF52266.1|  241|Drosophila melanogaster CG14013-PA
           protein.
          Length = 241

 Score = 68.1 bits (159), Expect = 8e-12
 Identities = 49/181 (27%), Positives = 77/181 (42%), Gaps = 10/181 (5%)

Query: 13  GVEADRRLLPFVTWEEYLDSLIDIADLRNLRSTAAARTVAALGYRANGDTLSEKEFYTRR 72
           G   D  +L F  + +Y+ S   + D R L +    +T+  LGYR      + +E+  R 
Sbjct: 5   GKSVDFSVLEFDNYNDYISSFATVTDHRYLGNQNTIKTIVQLGYRTTKIPYTAEEYEKRV 64

Query: 73  AVINEIVYPTVKAYVLVSE--GVVIDDPFSRELAIRERANRVGILQSIIFIRHFTKGGFE 130
            +  E + P +    L S+       DP   E   RE  N   IL +I+F  +    G E
Sbjct: 65  DLALEAIRPKLAHVGLFSDLLSPTNRDPVLLEFKARELLNLNKILSTIVFTSYIHMDGSE 124

Query: 131 ISGYID--------YAHRLVSENWAQFFRSKKMLWPRDKDLGYYHWRHGTVRSNISRNYK 182
           ISGYID        +   +   +W   F+ +  L P    L Y + R+  V+   S NY+
Sbjct: 125 ISGYIDLDMSWRNCFREAIKHTDWRGVFQGRSRLKPMPHHLSYSNPRYNVVKYTDSDNYQ 184

Query: 183 I 183
           +
Sbjct: 185 V 185


>AE014134-425|AAF51245.1|  235|Drosophila melanogaster CG3528-PA
           protein.
          Length = 235

 Score = 60.9 bits (141), Expect = 1e-09
 Identities = 46/179 (25%), Positives = 82/179 (45%), Gaps = 12/179 (6%)

Query: 20  LLPFVTWEEYLDSLIDIADLRNLRSTAAARTVA--ALGYRANGDTLSEKEFYTRRAVINE 77
           L+ F  +++Y+DS I I D R L +    R +   A G    G+ L+ ++FY R+     
Sbjct: 3   LINFNHYQDYVDSFITIQDTRYLGNKEIQRNLIQNACGKNCLGNLLTREQFYQRKEKELV 62

Query: 78  IVYPT-VKAYVLVSEGVVIDDPFSRELAIRERANRVGILQSIIFIRHFTKGGFEISGYID 136
           ++ P  ++   L  + +   D   ++ A RE+      + +++++   +K G EIS ++D
Sbjct: 63  LLKPRGLRGLQLFGDYLNNKDEVLQQFANREKKLLEKQISTVVYLVMRSKKGLEISSFLD 122

Query: 137 YAHRLVS---EN------WAQFFRSKKMLWPRDKDLGYYHWRHGTVRSNISRNYKIPNK 186
               L     EN      W   F  +  L P +  L Y+ W    V  N S N+++ NK
Sbjct: 123 LEQSLRESRFENSTSCVDWRAIFEGRTKLRPSNLHLSYFDWHQNRVSFNNSDNFRVLNK 181


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.322    0.138    0.417 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,735,494
Number of Sequences: 52641
Number of extensions: 364573
Number of successful extensions: 591
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 578
Number of HSP's gapped (non-prelim): 5
length of query: 204
length of database: 24,830,863
effective HSP length: 82
effective length of query: 122
effective length of database: 20,514,301
effective search space: 2502744722
effective search space used: 2502744722
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 60 (28.3 bits)