GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002773-TA|BGIBMGA002773-PA|IPR001464|Annexin
         (482 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             29   0.11 
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    24   2.5  
AB086196-1|BAD06465.1|  289|Apis mellifera Period protein.             24   2.5  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    24   3.2  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              24   3.2  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    23   4.3  
DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.              22   9.9  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   9.9  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 28.7 bits (61), Expect = 0.11
 Identities = 14/34 (41%), Positives = 15/34 (44%)

Query: 55   QQNQGYPQSTAQYPTQGVPYPTHQSQGYPQSTAQ 88
            QQ Q  PQ  +Q P Q  P P  Q Q   Q   Q
Sbjct: 1511 QQQQQQPQQQSQQPQQQQPQPQQQQQQQQQQQPQ 1544



 Score = 27.1 bits (57), Expect = 0.35
 Identities = 13/33 (39%), Positives = 14/33 (42%)

Query: 78   QSQGYPQSTAQYPTQGVPYPNHQSQGYPQSTAQ 110
            Q Q  PQ  +Q P Q  P P  Q Q   Q   Q
Sbjct: 1512 QQQQQPQQQSQQPQQQQPQPQQQQQQQQQQQPQ 1544


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 24.2 bits (50), Expect = 2.5
 Identities = 13/60 (21%), Positives = 31/60 (51%), Gaps = 2/60 (3%)

Query: 179 NPREDAGVLRKAMKGFGTDEKSIIQVLTKRSNEQRLRIALEFKTLYGTDLISDIKSETSG 238
           N  E +G   +    FG+  +++ Q ++KR +++  +   + KT+   +  +DI  + +G
Sbjct: 39  NRSESSGYCGRRPSTFGSSNEALPQPISKRKDKEHKK--KKSKTILAVNAEADITLKNAG 96


>AB086196-1|BAD06465.1|  289|Apis mellifera Period protein.
          Length = 289

 Score = 24.2 bits (50), Expect = 2.5
 Identities = 13/60 (21%), Positives = 31/60 (51%), Gaps = 2/60 (3%)

Query: 179 NPREDAGVLRKAMKGFGTDEKSIIQVLTKRSNEQRLRIALEFKTLYGTDLISDIKSETSG 238
           N  E +G   +    FG+  +++ Q ++KR +++  +   + KT+   +  +DI  + +G
Sbjct: 39  NRSESSGYCGRRPSTFGSSNEALPQPISKRKDKEHKK--KKSKTILAVNAEADITLKNAG 96


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 23.8 bits (49), Expect = 3.2
 Identities = 13/58 (22%), Positives = 26/58 (44%)

Query: 227 DLISDIKSETSGKFEDLLIALLTPLPKFYAKELHEAMVGIGTDEGVLIEVMCTMSNYE 284
           D+ + +  +T+  FE  L   +  +P++   + H     IG+    + EVM     +E
Sbjct: 160 DIHNSVTGKTTACFEPSLDYCVVKIPRWDLGKFHRVCTQIGSSMKSVGEVMAIGRKFE 217


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.8 bits (49), Expect = 3.2
 Identities = 15/58 (25%), Positives = 23/58 (39%), Gaps = 5/58 (8%)

Query: 61   PQSTAQYPTQGVPYPTHQSQGYPQSTAQYPTQGVPYPNHQSQGYPQSTAQY---PTQG 115
            P    Q+ T   P+P +   G       +PT    +    SQ  P+   +Y   P+QG
Sbjct: 1739 PSKAMQFQT--FPHPGNGHSGTMGPPVGHPTNASAHSRSGSQSMPRQNGRYSRVPSQG 1794


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 23.4 bits (48), Expect = 4.3
 Identities = 14/56 (25%), Positives = 22/56 (39%)

Query: 53  PIQQNQGYPQSTAQYPTQGVPYPTHQSQGYPQSTAQYPTQGVPYPNHQSQGYPQST 108
           P+ ++Q + Q   Q+P        HQSQ   Q    +    +     QSQ   Q +
Sbjct: 162 PLVESQMHHQMHTQHPHMQPQQGQHQSQAQQQHLQAHEQHMMYQQQQQSQAASQQS 217


>DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 9.9
 Identities = 8/28 (28%), Positives = 17/28 (60%), Gaps = 1/28 (3%)

Query: 258 ELHEAMVGIGTDEGVLIEVMCTMSNYEI 285
           +++E  + +  DE VL+ + CTM  + +
Sbjct: 46  DINEGKINMD-DENVLLFIECTMKKFNV 72


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.2 bits (45), Expect = 9.9
 Identities = 12/32 (37%), Positives = 13/32 (40%)

Query: 63  STAQYPTQGVPYPTHQSQGYPQSTAQYPTQGV 94
           S AQ+ T   P P     G P S  Q  T  V
Sbjct: 386 SGAQFATPCTPSPPRGPGGVPTSVIQAATSSV 417


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.316    0.134    0.398 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,768
Number of Sequences: 429
Number of extensions: 6499
Number of successful extensions: 18
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 7
Number of HSP's gapped (non-prelim): 14
length of query: 482
length of database: 140,377
effective HSP length: 60
effective length of query: 422
effective length of database: 114,637
effective search space: 48376814
effective search space used: 48376814
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 45 (22.2 bits)