Silkworm BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002772-TA|BGIBMGA002772-PA|undefined
         (77 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC032592-1|AAH32592.1|  529|Homo sapiens nucleolar protein NOP5/...    28   5.2  
BC009306-1|AAH09306.1|  522|Homo sapiens NOP5/NOP58 protein prot...    28   5.2  
AF263608-1|AAF91394.1|  529|Homo sapiens nucleolar protein 5 pro...    28   5.2  
AF123534-1|AAD27610.1|  529|Homo sapiens nucleolar protein NOP5/...    28   5.2  
AC064836-1|AAY24145.1|  529|Homo sapiens unknown protein.              28   5.2  
U15174-1|AAC00022.1|  194|Homo sapiens BCL2/adenovirus E1B 19kD-...    27   6.9  
BC080643-1|AAH80643.1|  228|Homo sapiens BNIP3 protein protein.        27   6.9  
BC067818-1|AAH67818.1|  244|Homo sapiens BNIP3 protein protein.        27   6.9  
BC021989-1|AAH21989.1|  194|Homo sapiens BCL2/adenovirus E1B 19k...    27   6.9  
AY886764-1|AAW62256.1|  194|Homo sapiens BCL2/adenovirus E1B 19k...    27   6.9  
AL162274-1|CAD13201.1|  194|Homo sapiens BCL2/adenovirus E1B 19k...    27   6.9  
AK222626-1|BAD96346.1|  194|Homo sapiens BCL2/adenovirus E1B 19k...    27   6.9  
AF002697-1|AAC16738.1|  194|Homo sapiens E1B 19K/Bcl-2-binding p...    27   6.9  

>BC032592-1|AAH32592.1|  529|Homo sapiens nucleolar protein
          NOP5/NOP58 protein.
          Length = 529

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 10/27 (37%), Positives = 19/27 (70%)

Query: 4  LQRNRVNKLIKLIVMAILEEAHEEISV 30
          L   ++NK +K ++  I++EAHE ++V
Sbjct: 63 LMEGKINKQLKKVLKKIVKEAHEPLAV 89


>BC009306-1|AAH09306.1|  522|Homo sapiens NOP5/NOP58 protein
          protein.
          Length = 522

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 10/27 (37%), Positives = 19/27 (70%)

Query: 4  LQRNRVNKLIKLIVMAILEEAHEEISV 30
          L   ++NK +K ++  I++EAHE ++V
Sbjct: 63 LMEGKINKQLKKVLKKIVKEAHEPLAV 89


>AF263608-1|AAF91394.1|  529|Homo sapiens nucleolar protein 5
          protein.
          Length = 529

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 10/27 (37%), Positives = 19/27 (70%)

Query: 4  LQRNRVNKLIKLIVMAILEEAHEEISV 30
          L   ++NK +K ++  I++EAHE ++V
Sbjct: 63 LMEGKINKQLKKVLKKIVKEAHEPLAV 89


>AF123534-1|AAD27610.1|  529|Homo sapiens nucleolar protein
          NOP5/NOP58 protein.
          Length = 529

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 10/27 (37%), Positives = 19/27 (70%)

Query: 4  LQRNRVNKLIKLIVMAILEEAHEEISV 30
          L   ++NK +K ++  I++EAHE ++V
Sbjct: 63 LMEGKINKQLKKVLKKIVKEAHEPLAV 89


>AC064836-1|AAY24145.1|  529|Homo sapiens unknown protein.
          Length = 529

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 10/27 (37%), Positives = 19/27 (70%)

Query: 4  LQRNRVNKLIKLIVMAILEEAHEEISV 30
          L   ++NK +K ++  I++EAHE ++V
Sbjct: 63 LMEGKINKQLKKVLKKIVKEAHEPLAV 89


>U15174-1|AAC00022.1|  194|Homo sapiens BCL2/adenovirus E1B
           19kD-interacting protein 3 protein.
          Length = 194

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 11/36 (30%), Positives = 19/36 (52%)

Query: 21  LEEAHEEISVIKKNKIWVRKWINRRDKLGATKCLLK 56
           +E   E  S++KKN  W+  W +R + +   + L K
Sbjct: 100 IERRKEVESILKKNSDWIWDWSSRPENIPPKEFLFK 135


>BC080643-1|AAH80643.1|  228|Homo sapiens BNIP3 protein protein.
          Length = 228

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 11/36 (30%), Positives = 19/36 (52%)

Query: 21  LEEAHEEISVIKKNKIWVRKWINRRDKLGATKCLLK 56
           +E   E  S++KKN  W+  W +R + +   + L K
Sbjct: 134 IERRKEVESILKKNSDWIWDWSSRPENIPPKEFLFK 169


>BC067818-1|AAH67818.1|  244|Homo sapiens BNIP3 protein protein.
          Length = 244

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 11/36 (30%), Positives = 19/36 (52%)

Query: 21  LEEAHEEISVIKKNKIWVRKWINRRDKLGATKCLLK 56
           +E   E  S++KKN  W+  W +R + +   + L K
Sbjct: 150 IERRKEVESILKKNSDWIWDWSSRPENIPPKEFLFK 185


>BC021989-1|AAH21989.1|  194|Homo sapiens BCL2/adenovirus E1B 19kDa
           interacting protein 3 protein.
          Length = 194

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 11/36 (30%), Positives = 19/36 (52%)

Query: 21  LEEAHEEISVIKKNKIWVRKWINRRDKLGATKCLLK 56
           +E   E  S++KKN  W+  W +R + +   + L K
Sbjct: 100 IERRKEVESILKKNSDWIWDWSSRPENIPPKEFLFK 135


>AY886764-1|AAW62256.1|  194|Homo sapiens BCL2/adenovirus E1B 19kDa
           interacting protein 3 protein.
          Length = 194

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 11/36 (30%), Positives = 19/36 (52%)

Query: 21  LEEAHEEISVIKKNKIWVRKWINRRDKLGATKCLLK 56
           +E   E  S++KKN  W+  W +R + +   + L K
Sbjct: 100 IERRKEVESILKKNSDWIWDWSSRPENIPPKEFLFK 135


>AL162274-1|CAD13201.1|  194|Homo sapiens BCL2/adenovirus E1B 19kDa
           interacting protein 3 protein.
          Length = 194

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 11/36 (30%), Positives = 19/36 (52%)

Query: 21  LEEAHEEISVIKKNKIWVRKWINRRDKLGATKCLLK 56
           +E   E  S++KKN  W+  W +R + +   + L K
Sbjct: 100 IERRKEVESILKKNSDWIWDWSSRPENIPPKEFLFK 135


>AK222626-1|BAD96346.1|  194|Homo sapiens BCL2/adenovirus E1B
           19kD-interacting protein 3 variant protein.
          Length = 194

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 11/36 (30%), Positives = 19/36 (52%)

Query: 21  LEEAHEEISVIKKNKIWVRKWINRRDKLGATKCLLK 56
           +E   E  S++KKN  W+  W +R + +   + L K
Sbjct: 100 IERRKEVESILKKNSDWIWDWSSRPENIPPKEFLFK 135


>AF002697-1|AAC16738.1|  194|Homo sapiens E1B 19K/Bcl-2-binding
           protein Nip3 protein.
          Length = 194

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 11/36 (30%), Positives = 19/36 (52%)

Query: 21  LEEAHEEISVIKKNKIWVRKWINRRDKLGATKCLLK 56
           +E   E  S++KKN  W+  W +R + +   + L K
Sbjct: 100 IERRKEVESILKKNSDWIWDWSSRPENIPPKEFLFK 135


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.321    0.135    0.404 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,354,873
Number of Sequences: 224733
Number of extensions: 325691
Number of successful extensions: 563
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 550
Number of HSP's gapped (non-prelim): 13
length of query: 77
length of database: 73,234,838
effective HSP length: 56
effective length of query: 21
effective length of database: 60,649,790
effective search space: 1273645590
effective search space used: 1273645590
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 57 (27.1 bits)