GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002772-TA|BGIBMGA002772-PA|undefined
         (77 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    23   0.48 
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    23   0.48 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   0.84 
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    20   3.4  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    20   3.4  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    20   3.4  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    20   3.4  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    19   7.8  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       19   7.8  

>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.6 bits (46), Expect = 0.48
 Identities = 11/37 (29%), Positives = 20/37 (54%), Gaps = 7/37 (18%)

Query: 42  INRRDK-------LGATKCLLKELALEEIPKNTSIVW 71
           ++RRDK       LGAT C + ++ +  +  + +I W
Sbjct: 164 LDRRDKFMLLGAWLGATLCSIPQMVVFHVESHPNITW 200


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.6 bits (46), Expect = 0.48
 Identities = 11/37 (29%), Positives = 20/37 (54%), Gaps = 7/37 (18%)

Query: 42  INRRDK-------LGATKCLLKELALEEIPKNTSIVW 71
           ++RRDK       LGAT C + ++ +  +  + +I W
Sbjct: 164 LDRRDKFMLLGAWLGATLCSIPQMVVFHVESHPNITW 200


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 0.84
 Identities = 9/18 (50%), Positives = 12/18 (66%)

Query: 34  NKIWVRKWINRRDKLGAT 51
           N+I  ++WI  RD  GAT
Sbjct: 911 NRIRNQRWIVNRDTSGAT 928


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 3.4
 Identities = 8/19 (42%), Positives = 13/19 (68%)

Query: 8   RVNKLIKLIVMAILEEAHE 26
           +VN+ +KL+V  I E A +
Sbjct: 632 QVNRFVKLLVATIDEAASD 650


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 3.4
 Identities = 8/19 (42%), Positives = 13/19 (68%)

Query: 8   RVNKLIKLIVMAILEEAHE 26
           +VN+ +KL+V  I E A +
Sbjct: 632 QVNRFVKLLVATIDEAASD 650


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 3.4
 Identities = 8/19 (42%), Positives = 13/19 (68%)

Query: 8   RVNKLIKLIVMAILEEAHE 26
           +VN+ +KL+V  I E A +
Sbjct: 632 QVNRFVKLLVATIDEAASD 650


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 3.4
 Identities = 8/19 (42%), Positives = 13/19 (68%)

Query: 8   RVNKLIKLIVMAILEEAHE 26
           +VN+ +KL+V  I E A +
Sbjct: 632 QVNRFVKLLVATIDEAASD 650


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 18.6 bits (36), Expect = 7.8
 Identities = 4/12 (33%), Positives = 8/12 (66%)

Query: 30  VIKKNKIWVRKW 41
           ++ K+  W +KW
Sbjct: 316 ILNKDSGWTKKW 327


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 18.6 bits (36), Expect = 7.8
 Identities = 6/12 (50%), Positives = 9/12 (75%)

Query: 46 DKLGATKCLLKE 57
          DK+ A +C+ KE
Sbjct: 85 DKINAFQCICKE 96


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.321    0.135    0.404 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,898
Number of Sequences: 317
Number of extensions: 586
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of query: 77
length of database: 114,650
effective HSP length: 46
effective length of query: 31
effective length of database: 100,068
effective search space:  3102108
effective search space used:  3102108
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.6 bits)
S2: 36 (18.6 bits)