GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002772-TA|BGIBMGA002772-PA|undefined
         (77 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL138972-6|CAB72289.1|  249|Drosophila melanogaster EG:BACR25B3....    27   4.2  
AE014298-411|AAG22401.2|  249|Drosophila melanogaster CG8310-PA ...    27   4.2  
AY069488-1|AAL39633.1|  459|Drosophila melanogaster LD21841p pro...    25   9.6  
AE014297-1442|AAF54740.2|  459|Drosophila melanogaster CG3313-PA...    25   9.6  

>AL138972-6|CAB72289.1|  249|Drosophila melanogaster EG:BACR25B3.4
           protein.
          Length = 249

 Score = 26.6 bits (56), Expect = 4.2
 Identities = 17/52 (32%), Positives = 28/52 (53%)

Query: 8   RVNKLIKLIVMAILEEAHEEISVIKKNKIWVRKWINRRDKLGATKCLLKELA 59
           R+N+ I+ I+  + E   EE   +KK +   R+     DKL A + LL ++A
Sbjct: 179 RINRTIEYIISELDELEREEFYRLKKIQDKKREARKASDKLRAEQRLLGQMA 230


>AE014298-411|AAG22401.2|  249|Drosophila melanogaster CG8310-PA
           protein.
          Length = 249

 Score = 26.6 bits (56), Expect = 4.2
 Identities = 17/52 (32%), Positives = 28/52 (53%)

Query: 8   RVNKLIKLIVMAILEEAHEEISVIKKNKIWVRKWINRRDKLGATKCLLKELA 59
           R+N+ I+ I+  + E   EE   +KK +   R+     DKL A + LL ++A
Sbjct: 179 RINRTIEYIISELDELEREEFYRLKKIQDKKREARKASDKLRAEQRLLGQMA 230


>AY069488-1|AAL39633.1|  459|Drosophila melanogaster LD21841p
           protein.
          Length = 459

 Score = 25.4 bits (53), Expect = 9.6
 Identities = 10/27 (37%), Positives = 17/27 (62%)

Query: 27  EISVIKKNKIWVRKWINRRDKLGATKC 53
           +IS+   NK++  KW++ R  +  TKC
Sbjct: 112 QISLGYINKVFCSKWLSSRQVVFGTKC 138


>AE014297-1442|AAF54740.2|  459|Drosophila melanogaster CG3313-PA
           protein.
          Length = 459

 Score = 25.4 bits (53), Expect = 9.6
 Identities = 10/27 (37%), Positives = 17/27 (62%)

Query: 27  EISVIKKNKIWVRKWINRRDKLGATKC 53
           +IS+   NK++  KW++ R  +  TKC
Sbjct: 112 QISLGYINKVFCSKWLSSRQVVFGTKC 138


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.321    0.135    0.404 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,436,661
Number of Sequences: 52641
Number of extensions: 104512
Number of successful extensions: 242
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 238
Number of HSP's gapped (non-prelim): 4
length of query: 77
length of database: 24,830,863
effective HSP length: 57
effective length of query: 20
effective length of database: 21,830,326
effective search space: 436606520
effective search space used: 436606520
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 53 (25.4 bits)