GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002772-TA|BGIBMGA002772-PA|undefined
         (77 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc fi...    22   1.0  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              20   3.1  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          20   4.1  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    19   5.4  
AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.         19   7.1  

>AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc
          finger domain-Z3 isoform protein.
          Length = 92

 Score = 21.8 bits (44), Expect = 1.0
 Identities = 10/31 (32%), Positives = 15/31 (48%)

Query: 33 KNKIWVRKWINRRDKLGATKCLLKELALEEI 63
          KN +   K +  R   G  K LLK  A++ +
Sbjct: 48 KNSLTTHKSLQHRGSSGMLKRLLKTTAIKNV 78


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 20.2 bits (40), Expect = 3.1
 Identities = 4/13 (30%), Positives = 10/13 (76%)

Query: 34  NKIWVRKWINRRD 46
           +++W+  W N++D
Sbjct: 602 DQVWILNWRNQKD 614


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 19.8 bits (39), Expect = 4.1
 Identities = 10/21 (47%), Positives = 12/21 (57%)

Query: 50  ATKCLLKELALEEIPKNTSIV 70
           AT+ +     L E PKNTS V
Sbjct: 148 ATEKMFVARHLAETPKNTSAV 168


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 19.4 bits (38), Expect = 5.4
 Identities = 7/20 (35%), Positives = 13/20 (65%)

Query: 27  EISVIKKNKIWVRKWINRRD 46
           +I++ K+ KIW+  +   RD
Sbjct: 387 KITIPKEMKIWIPAFAIHRD 406


>AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.
          Length = 104

 Score = 19.0 bits (37), Expect = 7.1
 Identities = 6/18 (33%), Positives = 9/18 (50%)

Query: 37 WVRKWINRRDKLGATKCL 54
          W  KW++      A +CL
Sbjct: 69 WQSKWLSINHSACAIRCL 86


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.321    0.135    0.404 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,740
Number of Sequences: 429
Number of extensions: 810
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of query: 77
length of database: 140,377
effective HSP length: 46
effective length of query: 31
effective length of database: 120,643
effective search space:  3739933
effective search space used:  3739933
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.6 bits)
S2: 36 (18.6 bits)