GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002766-TA|BGIBMGA002766-PA|IPR012617|TRAUB
         (574 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         33   0.021
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    30   0.19 
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    29   0.25 
AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical prote...    29   0.34 
AY344840-1|AAR05811.1|  221|Anopheles gambiae TEP4 protein.            28   0.59 
AY344839-1|AAR05810.1|  221|Anopheles gambiae TEP4 protein.            28   0.59 
AY344838-1|AAR05809.1|  221|Anopheles gambiae TEP4 protein.            28   0.59 
AY344837-1|AAR05808.1|  221|Anopheles gambiae TEP4 protein.            28   0.59 
AY344836-1|AAR05807.1|  221|Anopheles gambiae TEP4 protein.            28   0.59 
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       27   1.8  
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    26   2.4  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          26   2.4  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    26   3.1  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    25   5.5  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    25   5.5  
AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    25   5.5  
DQ974169-1|ABJ52809.1|  508|Anopheles gambiae serpin 11 protein.       25   7.2  
DQ437578-1|ABD96048.1|  234|Anopheles gambiae short neuropeptide...    24   9.5  

>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 33.1 bits (72), Expect = 0.021
 Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 1/67 (1%)

Query: 308 KVEQKQESDE-EIPSDTEDEEIPSDTEEDESPVSKNTNESKKSNAPANLPKKRKLDDYEK 366
           K EQ+ E  E E   + EDEE     EE + PVS ++     S    +L  +R  D    
Sbjct: 368 KQEQRDEEGELEAAEEEEDEEEEISVEEVDEPVSNHSASHSASEQAWDLSCRRSSDATSS 427

Query: 367 EISISHK 373
            ++ S+K
Sbjct: 428 TVTSSNK 434


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 29.9 bits (64), Expect = 0.19
 Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 1/65 (1%)

Query: 289  NNYPETKTLTTNKRSAAPSKVEQKQESDE-EIPSDTEDEEIPSDTEEDESPVSKNTNESK 347
            N YP  +T +   +    S  ++   S+  +I    E   I SD +  ESP   N ++  
Sbjct: 1442 NEYPVRRTDSIQSKRKVSSLSDRSDNSEPGQISGGEESPGILSDDQPPESPCDSNDSDET 1501

Query: 348  KSNAP 352
              N P
Sbjct: 1502 TKNLP 1506


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 29.5 bits (63), Expect = 0.25
 Identities = 16/54 (29%), Positives = 27/54 (50%)

Query: 308 KVEQKQESDEEIPSDTEDEEIPSDTEEDESPVSKNTNESKKSNAPANLPKKRKL 361
           K+E  + S EE   D E++     T E+  PV++   E+ K     N  ++R+L
Sbjct: 507 KLESLRYSYEETEKDLEEKRARLQTLEEALPVTRTELETAKQKLQENANEEREL 560


>AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical protein
           protein.
          Length = 166

 Score = 29.1 bits (62), Expect = 0.34
 Identities = 14/42 (33%), Positives = 22/42 (52%)

Query: 305 APSKVEQKQESDEEIPSDTEDEEIPSDTEEDESPVSKNTNES 346
           AP  V +    DEE   + ++EE  +D EE +   S+ + ES
Sbjct: 65  APEPVPEDGSPDEEHLEEEQEEEAEADEEEADESESEESEES 106


>AY344840-1|AAR05811.1|  221|Anopheles gambiae TEP4 protein.
          Length = 221

 Score = 28.3 bits (60), Expect = 0.59
 Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 3/45 (6%)

Query: 250 GLVKQGSSVSTMAGMKIL-NFSYGVKHLYITLLTLQNILFNNYPE 293
           G++KQ   ++T+    I+ N  Y +K     L+ LQ I+FNN+P+
Sbjct: 166 GIIKQTLQLTTVQPFYIVPNMPYSIKRG--ELVELQFIVFNNFPK 208


>AY344839-1|AAR05810.1|  221|Anopheles gambiae TEP4 protein.
          Length = 221

 Score = 28.3 bits (60), Expect = 0.59
 Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 3/45 (6%)

Query: 250 GLVKQGSSVSTMAGMKIL-NFSYGVKHLYITLLTLQNILFNNYPE 293
           G++KQ   ++T+    I+ N  Y +K     L+ LQ I+FNN+P+
Sbjct: 166 GIIKQTLQLTTVQPFYIVPNMPYSIKRG--ELVELQFIVFNNFPK 208


>AY344838-1|AAR05809.1|  221|Anopheles gambiae TEP4 protein.
          Length = 221

 Score = 28.3 bits (60), Expect = 0.59
 Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 3/45 (6%)

Query: 250 GLVKQGSSVSTMAGMKIL-NFSYGVKHLYITLLTLQNILFNNYPE 293
           G++KQ   ++T+    I+ N  Y +K     L+ LQ I+FNN+P+
Sbjct: 166 GIIKQPLQLTTVQPFYIVPNMPYSIKRG--ELVELQFIVFNNFPK 208


>AY344837-1|AAR05808.1|  221|Anopheles gambiae TEP4 protein.
          Length = 221

 Score = 28.3 bits (60), Expect = 0.59
 Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 3/45 (6%)

Query: 250 GLVKQGSSVSTMAGMKIL-NFSYGVKHLYITLLTLQNILFNNYPE 293
           G++KQ   ++T+    I+ N  Y +K     L+ LQ I+FNN+P+
Sbjct: 166 GIIKQPLQLTTVQPFYIVPNMPYSIKRG--ELVELQFIVFNNFPK 208


>AY344836-1|AAR05807.1|  221|Anopheles gambiae TEP4 protein.
          Length = 221

 Score = 28.3 bits (60), Expect = 0.59
 Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 3/45 (6%)

Query: 250 GLVKQGSSVSTMAGMKIL-NFSYGVKHLYITLLTLQNILFNNYPE 293
           G++KQ   ++T+    I+ N  Y +K     L+ LQ I+FNN+P+
Sbjct: 166 GIIKQPLQLTTVQPFYIVPNMPYSIKRG--ELVELQFIVFNNFPK 208


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 26.6 bits (56), Expect = 1.8
 Identities = 17/68 (25%), Positives = 30/68 (44%)

Query: 288 FNNYPETKTLTTNKRSAAPSKVEQKQESDEEIPSDTEDEEIPSDTEEDESPVSKNTNESK 347
           F  + +T  LTT   S     +E +     E  S T  EE+P+ T      ++ +  E  
Sbjct: 498 FQRFAKTTPLTTTTTSTEEPALEPETIMAVEPESTTLMEELPTTTVPITDAITPDDTELL 557

Query: 348 KSNAPANL 355
           ++++  NL
Sbjct: 558 QASSNTNL 565


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 26.2 bits (55), Expect = 2.4
 Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 1/29 (3%)

Query: 308 KVEQKQESDEEIPSDTEDEEIPSDTEEDE 336
           K E+  E +E+   D EDE    DTEEDE
Sbjct: 473 KGEEDYEGEED-EEDEEDEYEGDDTEEDE 500


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 26.2 bits (55), Expect = 2.4
 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)

Query: 310 EQKQESDEEIPSDTEDEEIPSDTEEDESPVSKNTNESKKSNAPAN 354
           E K+E D     D E+EE   + EEDE       +  ++++AP++
Sbjct: 956 EVKKEVDAA-EDDEEEEEEEQEEEEDEDEEGGEEHGQREASAPSS 999


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 25.8 bits (54), Expect = 3.1
 Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 1/33 (3%)

Query: 437 SKAVN-NDNDSEKVTKNRKDDDEYIPEIFDDND 468
           +KA N N+N S+++T +   D+  +P   DD+D
Sbjct: 758 TKADNMNNNHSDQLTGDNSADERAVPNDADDDD 790


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 25.0 bits (52), Expect = 5.5
 Identities = 18/79 (22%), Positives = 33/79 (41%), Gaps = 4/79 (5%)

Query: 286 ILFNNYPETKTLTTNKRSAAPSKVEQKQESDEEIP--SDTEDEEIP--SDTEEDESPVSK 341
           ++ +  P   + TT+  S+ PS  +Q+Q    ++P  S ++    P  S T    S V  
Sbjct: 2   LVISQQPTASSSTTSSSSSKPSPQQQQQLHSADVPHSSTSQSSRRPQHSSTSASSSSVPT 61

Query: 342 NTNESKKSNAPANLPKKRK 360
               S +  A  +    R+
Sbjct: 62  LPTTSGEPRAAGSSSNSRR 80


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 25.0 bits (52), Expect = 5.5
 Identities = 18/79 (22%), Positives = 33/79 (41%), Gaps = 4/79 (5%)

Query: 286 ILFNNYPETKTLTTNKRSAAPSKVEQKQESDEEIP--SDTEDEEIP--SDTEEDESPVSK 341
           ++ +  P   + TT+  S+ PS  +Q+Q    ++P  S ++    P  S T    S V  
Sbjct: 2   LVISQQPTASSSTTSSSSSKPSPQQQQQLHSADVPHSSTSQSSRRPQHSSTSASSSSVPT 61

Query: 342 NTNESKKSNAPANLPKKRK 360
               S +  A  +    R+
Sbjct: 62  LPTTSGEPRAAGSSSNSRR 80


>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 25.0 bits (52), Expect = 5.5
 Identities = 11/35 (31%), Positives = 19/35 (54%)

Query: 185 VKKQNISEEAKKGNCVRNQLLVWEGLLEMRIHLQR 219
           + +QN+ E  KK   ++ QL     L+E ++  QR
Sbjct: 40  ILRQNLEETRKKNESLQEQLTQLRWLMEEKLREQR 74


>DQ974169-1|ABJ52809.1|  508|Anopheles gambiae serpin 11 protein.
          Length = 508

 Score = 24.6 bits (51), Expect = 7.2
 Identities = 40/182 (21%), Positives = 75/182 (41%), Gaps = 12/182 (6%)

Query: 342 NTNESKKSNAPANLPKKRKLDDYEKEI-SISHKAFKPFRDASIQKWNEKTRLATASNIKN 400
           +T  S  S+A +    K+ + D   E+   S +  K   D +++ + +       SN   
Sbjct: 93  DTRLSGASSATSTSMDKQPVGDAGLEVPKPSVRYDKKVMDFAVKLFQKAFPSDDTSNYII 152

Query: 401 APTNTVLQQISYIL---SDRDKLIRRTQLKRTEYDIVGYSKAVNNDNDSEKVTKNRKDDD 457
           +P   V   +SY+    S+  +L   + L+    D+    +A+    D E +TKN+ D  
Sbjct: 153 SPI-MVQSLLSYLFDGASNATRLEMESVLQLNMNDLHDIERALTPQADQEPITKNKLDSA 211

Query: 458 EYI--PEIFDDNDFYHQLLR-ELIECKSADISDPVQLS---RQWIALQQMRSKMKRKVDT 511
             I     F+    +   L+   +     D S+P   S     W A ++ R +++  VD 
Sbjct: 212 SQIFKSTTFELLPAFRDSLKSNHVPLSEMDFSNPRLASETINNW-AREKTRQRIQEVVDE 270

Query: 512 KA 513
           K+
Sbjct: 271 KS 272


>DQ437578-1|ABD96048.1|  234|Anopheles gambiae short neuropeptide F
           prepropeptide protein.
          Length = 234

 Score = 24.2 bits (50), Expect = 9.5
 Identities = 13/55 (23%), Positives = 27/55 (49%), Gaps = 3/55 (5%)

Query: 297 LTTNKRSAAPSKVEQKQESDEEIPSDTEDEEIPSDTEEDES---PVSKNTNESKK 348
           LTT +++   ++  +K+   + +     D  +  D+ ED++     S+NTN   K
Sbjct: 180 LTTGQQAQPANEASEKRAPTQRLRWGRSDPALAKDSSEDKALDVEESENTNADDK 234


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.310    0.128    0.354 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 517,421
Number of Sequences: 2123
Number of extensions: 19924
Number of successful extensions: 63
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 45
Number of HSP's gapped (non-prelim): 23
length of query: 574
length of database: 516,269
effective HSP length: 68
effective length of query: 506
effective length of database: 371,905
effective search space: 188183930
effective search space used: 188183930
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 50 (24.2 bits)