Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002764-TA|BGIBMGA002764-PA|IPR011047|Quinonprotein
alcohol dehydrogenase-like
(482 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0350 - 2753217-2754152 34 0.29
05_04_0048 - 17493775-17494431,17494506-17494801,17494851-174949... 32 1.2
10_08_0972 + 21958658-21958825,21959006-21959197,21959645-219598... 31 2.7
03_05_0816 + 27928812-27930059,27931007-27931111,27931197-279312... 30 3.6
12_02_0828 - 23502276-23503472,23503568-23504002,23504097-235042... 30 4.7
02_03_0180 - 16031366-16031445,16031950-16032022,16032148-160321... 30 4.7
06_01_0121 - 932334-933074,933189-933272,934602-935006 29 6.2
>03_01_0350 - 2753217-2754152
Length = 311
Score = 33.9 bits (74), Expect = 0.29
Identities = 16/46 (34%), Positives = 20/46 (43%)
Query: 151 EALACCWSNGRVDWRDGSSGRVLRRVQMRASAAAMLLADYRALGTP 196
+AL WS G + WR G RR AS + + R LG P
Sbjct: 47 QALRGLWSRGAMPWRGHGGGGARRRAAREASVIRTVATEERGLGMP 92
>05_04_0048 -
17493775-17494431,17494506-17494801,17494851-17494958,
17495463-17495544,17495561-17495740
Length = 440
Score = 31.9 bits (69), Expect = 1.2
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 192 ALGTPDLVCVSVRGEGYSPTQESSGFN----DTTKNPATEEDRLAITE-LLNKKQALMLE 246
A G D V + +RG+ + + SG + +K + ED L +T +L + QA MLE
Sbjct: 227 AAGLHDEVPLQIRGQTAALVTQISGLEQQVEELSKKLCSTEDELEVTNAMLKETQAAMLE 286
Query: 247 LQHYEANAASAV 258
Q A A +A+
Sbjct: 287 AQSDRATAITAM 298
>10_08_0972 +
21958658-21958825,21959006-21959197,21959645-21959845,
21959920-21960009,21960424-21960591,21961100-21961354,
21961506-21961789,21961878-21962040,21962156-21962502,
21962726-21962759
Length = 633
Score = 30.7 bits (66), Expect = 2.7
Identities = 9/20 (45%), Positives = 15/20 (75%)
Query: 49 EGNEAFWNVVGGKVTAMITF 68
EG++ WN+VGGK+ A + +
Sbjct: 205 EGDDGIWNIVGGKIVASLVY 224
>03_05_0816 +
27928812-27930059,27931007-27931111,27931197-27931262,
27931337-27931501,27931671-27931745,27931829-27931983,
27932234-27932369,27932454-27932523,27932602-27932729,
27932838-27932894,27933326-27933511,27934031-27934123,
27934488-27934573,27934668-27934734,27934873-27934939,
27935016-27935152,27935618-27935709,27935849-27935915,
27936058-27936078
Length = 1006
Score = 30.3 bits (65), Expect = 3.6
Identities = 33/124 (26%), Positives = 48/124 (38%), Gaps = 6/124 (4%)
Query: 213 ESSGFNDTTKNPATEEDRLAITELLNKKQALMLELQHYEANAASAVMPDLED--DRPTTA 270
E+ G D T++ A E + + E + +M +L Y + +M L D D P
Sbjct: 280 EAPGLEDGTRHLAVEFV-VTLAEARERAPGMMRKLPRYVGRLFAVLMTMLLDVQDEPAWH 338
Query: 271 MPTNTRLQVAVVHS--LDEGCLN-LAISTNNETIVRAALILAEGIFESGETLARHPPLSQ 327
+ S + CL+ LAI+ TI+ A L F S E RH L
Sbjct: 339 AAVSEEEDAGETGSYVFAQECLDRLAIAVGGNTILPVAAELLPSFFASEEWKRRHAALVT 398
Query: 328 IRPI 331
I I
Sbjct: 399 IAQI 402
>12_02_0828 -
23502276-23503472,23503568-23504002,23504097-23504213,
23505330-23505396,23505685-23505725,23506161-23506237,
23506699-23506945
Length = 726
Score = 29.9 bits (64), Expect = 4.7
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Query: 62 VTAMITFDFDRDGESELIV-GSEDSFIRVLKNNQFVAEIAETGPVVCLSVISDVRFAYG 119
VTA++ D ++ +I G+ S + VLKN A + LSVI + + G
Sbjct: 462 VTALLNLSIHEDNKASIISSGAVPSIVHVLKNGSMEARENAAATLFSLSVIDEYKVTIG 520
>02_03_0180 - 16031366-16031445,16031950-16032022,16032148-16032186,
16032434-16032715,16032790-16032948,16033034-16033390,
16033482-16033622,16033919-16034045,16034121-16034263,
16034740-16034917,16035019-16035552,16035628-16035812,
16036551-16036637,16036710-16036850,16036896-16037175,
16037944-16038020,16038326-16039138,16039292-16039801,
16039926-16040056,16040192-16040246,16040364-16040564,
16040640-16040909,16041103-16041184,16041271-16041434,
16041532-16041690,16041762-16042083,16042158-16042544,
16042811-16042999,16043233-16043317,16043458-16043753,
16043862-16043965,16044484-16044513,16044602-16044817,
16044923-16045540,16045718-16045993,16046619-16046762,
16046854-16046962,16047291-16047475,16047557-16047670,
16048348-16048479,16048929-16049249,16049424-16049891,
16054482-16054547,16054691-16054828,16054917-16055015,
16057098-16057194,16057661-16057761,16057858-16058085,
16059175-16059381,16059451-16059571,16059921-16059988,
16060148-16060213,16060396-16060509,16060949-16061300,
16063571-16063663,16063764-16063922,16064224-16064287,
16064385-16064577,16064673-16064710,16065510-16065645,
16065726-16065914,16065994-16066095,16067660-16067777,
16067861-16067964,16070338-16070346,16071428-16071475,
16071581-16071676,16072430-16072533,16073964-16074045,
16076573-16076601,16076708-16076963
Length = 4246
Score = 29.9 bits (64), Expect = 4.7
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Query: 208 YSPTQESSGFNDTTKNPATEEDRLAITELLNKKQALMLELQHYEANAASAVMPDLEDDRP 267
Y QE + + P TEE AI + ++K +Q YE + ASA+ DL D P
Sbjct: 1499 YRFVQEFTSYFMELATPHTEE---AI-KFIDKVGGFEWLIQKYEIDGASAIKLDLSLDTP 1554
Query: 268 TTAMPTNTR 276
+P N++
Sbjct: 1555 IIIVPKNSQ 1563
>06_01_0121 - 932334-933074,933189-933272,934602-935006
Length = 409
Score = 29.5 bits (63), Expect = 6.2
Identities = 35/130 (26%), Positives = 51/130 (39%), Gaps = 8/130 (6%)
Query: 115 RFAYGLANGTIGIYEDGVRLWRVKSKQNAISLQWSGEALACCWSNGRVDWR---DGSSGR 171
R++ + G G+ G + R K+ A++ WS A GRV WR G
Sbjct: 64 RWSMAVCRGEEGVGLGGGDVRR-KTTAPAVACDWSATAAHTRGGRGRVGWRRQWSARHGD 122
Query: 172 VLRRVQMRASAAAMLLADYRALGTPDLV-CVSVRGEGYSP---TQESSGFNDTTKNPATE 227
V A+AA++ L + LV +S R + P Q G TK P
Sbjct: 123 GFAVVGKAAAAASLQLQKQLVISRLHLVGGLSNRSQSQKPHCTVQTMGGDGKHTKLPWLG 182
Query: 228 EDRLAITELL 237
R A+T +L
Sbjct: 183 VARYAVTAVL 192
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.319 0.134 0.397
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,745,476
Number of Sequences: 37544
Number of extensions: 572306
Number of successful extensions: 1273
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1271
Number of HSP's gapped (non-prelim): 7
length of query: 482
length of database: 14,793,348
effective HSP length: 85
effective length of query: 397
effective length of database: 11,602,108
effective search space: 4606036876
effective search space used: 4606036876
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 62 (29.1 bits)
- SilkBase 1999-2023 -