Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002764-TA|BGIBMGA002764-PA|IPR011047|Quinonprotein
alcohol dehydrogenase-like
(482 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_13044| Best HMM Match : Vps26 (HMM E-Value=0) 205 7e-53
SB_54689| Best HMM Match : DUF1525 (HMM E-Value=6.3) 100 3e-21
SB_52781| Best HMM Match : FG-GAP (HMM E-Value=0.0043) 91 1e-18
SB_14030| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.17
SB_1968| Best HMM Match : PQQ (HMM E-Value=0.58) 35 0.17
SB_51065| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.29
SB_51248| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.7
SB_42162| Best HMM Match : 7tm_1 (HMM E-Value=0.0047) 31 2.7
SB_56678| Best HMM Match : WD40 (HMM E-Value=6.4e-22) 29 8.3
>SB_13044| Best HMM Match : Vps26 (HMM E-Value=0)
Length = 669
Score = 205 bits (500), Expect = 7e-53
Identities = 109/262 (41%), Positives = 153/262 (58%), Gaps = 12/262 (4%)
Query: 1 AYDVHDNSDLFFKEAPDGVNVIVAGSFGKYTKTLAIVGGNSSVLGLTWEGNEAFWNVVGG 60
AYDV +NSDLF+K+ DGVN I+ G G Y LA+ GGN S+ G +GN+ FW V G
Sbjct: 411 AYDVENNSDLFYKDVADGVNAILVGKLGGYDLPLALAGGNCSIQGFDCDGNDEFWTVTGD 470
Query: 61 KVTAMITFDFDRDGESELIVGSEDSFIRVLKNNQFVAEIAETGPVVCLSVISDVRFAYGL 120
V ++ DF+ DG +EL+VGSED IRV K ++ +AE+ ET V L + +F Y L
Sbjct: 471 NVCSLALCDFNGDGHNELLVGSEDFDIRVFKEDEIIAEMTETEAVTSLCPLRGSKFGYAL 530
Query: 121 ANGTIGIYEDGVRLWRVKSKQNAISLQW------SGEALACCWSNGRVDWRDGSSGRVLR 174
+NGT+G+Y+ R WR+KSK +AI++ L WSNG++D R SG V+
Sbjct: 531 SNGTVGVYDRTARYWRIKSKNHAIAINSFDIDSDGVPELITGWSNGKIDARSDRSGEVVF 590
Query: 175 RVQMRASAAAMLLADYRALGTPDLVCVSVRGE--GYSPTQESSGFNDTTKNPATEEDRLA 232
+ ++ A ++ DYR G +L+C SV GE GY P N N E+D A
Sbjct: 591 KDNFSSAIAGVIEGDYRMDGKMELICCSVDGEVRGYLPAPPEMKGNLMDTN--VEQD--A 646
Query: 233 ITELLNKKQALMLELQHYEANA 254
+ +L +KQ L+LEL++YE NA
Sbjct: 647 LRDLAQRKQNLLLELRNYEENA 668
>SB_54689| Best HMM Match : DUF1525 (HMM E-Value=6.3)
Length = 298
Score = 100 bits (239), Expect = 3e-21
Identities = 76/220 (34%), Positives = 109/220 (49%), Gaps = 30/220 (13%)
Query: 260 PDLEDDRPTTAMPTNTRLQVAV-VHSLDEGC---LNLAISTNNETIVRAALILAEGIFES 315
PD+ D +P NT+LQ ++ V+ E + L IST N+TI+R A+I AEG+FE
Sbjct: 6 PDV-DQTQMGVIPANTQLQTSLLVNPGSEQVQPHVELNISTTNDTIIRTAMIFAEGVFE- 63
Query: 316 GETLARHPPLSQIRPILHVPLHPPRDVPVDVHIKALVGYPNSEQYHIFEMTKQLPRFAMY 375
GE+ HP ++ L VP++PP+D+ VD+HIKA VG+ + RF MY
Sbjct: 64 GESHVVHPSSQNVKTSLRVPIYPPKDIQVDLHIKAFVGHKS--------------RFTMY 109
Query: 376 TMNYNATNRINYNSSYVTFQITERLQRICIWAXXXXXXXXXXXXXXXDAKE--FHVNLTC 433
S V+F I ER+ R +W +AK+ V
Sbjct: 110 IP---CPEGYAEPKSAVSFHINERVNRALMWVNQNFLLMEEI-----EAKDGCLDVMFLS 161
Query: 434 LRDQSTLDMNFNVDGNVKITTSDMRLAGDLVQSLAVFLNL 473
LR + + + GNV I T DM LAGDL+Q++A FL +
Sbjct: 162 LRTGNPVLFRMDQSGNVVIKTDDMDLAGDLIQAMAGFLGI 201
>SB_52781| Best HMM Match : FG-GAP (HMM E-Value=0.0043)
Length = 89
Score = 91.5 bits (217), Expect = 1e-18
Identities = 41/86 (47%), Positives = 55/86 (63%)
Query: 17 DGVNVIVAGSFGKYTKTLAIVGGNSSVLGLTWEGNEAFWNVVGGKVTAMITFDFDRDGES 76
DGVN I+ G G Y LA+ GGN S+ G +GN+ FW V G V ++ DF+ DG +
Sbjct: 3 DGVNAILVGKLGGYDLPLALAGGNCSIQGFDCDGNDEFWTVTGDNVCSLALCDFNGDGHN 62
Query: 77 ELIVGSEDSFIRVLKNNQFVAEIAET 102
EL+VGSED IRV K ++ +AE+ ET
Sbjct: 63 ELLVGSEDFDIRVFKEDEIIAEMTET 88
>SB_14030| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 765
Score = 34.7 bits (76), Expect = 0.17
Identities = 28/75 (37%), Positives = 36/75 (48%), Gaps = 7/75 (9%)
Query: 159 NGRVDWRDGSSGR-----VLRRVQMRASAAAM-LLADY-RALGTPDLVCVSVRGEGYSPT 211
N + R G SGR V+ V AS A M LL D + L + CV VRG+GY+ T
Sbjct: 432 NYTAEIRKGLSGRLGPNLVMHTVPPPASGAVMHLLLDILKGLESGFKTCVDVRGKGYNFT 491
Query: 212 QESSGFNDTTKNPAT 226
+ S DT + T
Sbjct: 492 ESSRDLKDTNTSTLT 506
>SB_1968| Best HMM Match : PQQ (HMM E-Value=0.58)
Length = 529
Score = 34.7 bits (76), Expect = 0.17
Identities = 35/145 (24%), Positives = 64/145 (44%), Gaps = 11/145 (7%)
Query: 71 DRDGESELIVGSEDSFIRVLKNNQFVA----EIAETGPVVCLSVISDVRFAYGLA--NGT 124
D D S L++G+E I +L F + + +S + DV F +A +G
Sbjct: 148 DEDAVSCLVIGTESKDIYILDPEAFTVLSKMSLLSVPAFMSVSGLYDVEFRVIVACRDGK 207
Query: 125 IGIYEDGVRLWR--VKSKQNAISLQWSGEALAC-CWSNGRVDWRDGSSGRVLRRVQMRAS 181
+ + G ++ + ++ A+ L+ G+ + C N V + + G+ L V + A+
Sbjct: 208 VYTLKRGNKIAKASIELTAQAVGLERIGKNIIVGCMDNTLVCY--STKGKKLWTVYLPAN 265
Query: 182 AAAMLLADYRALGTPDLVCVSVRGE 206
A M L DY+A G ++ GE
Sbjct: 266 IATMALMDYKARGFKGVMVALTNGE 290
>SB_51065| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 33.9 bits (74), Expect = 0.29
Identities = 16/45 (35%), Positives = 25/45 (55%)
Query: 162 VDWRDGSSGRVLRRVQMRASAAAMLLADYRALGTPDLVCVSVRGE 206
+D R SG V+ + ++ A ++ DYR G +L+C SV GE
Sbjct: 1 IDARSDRSGEVVFKDNFSSAIAGVIEGDYRMDGKMELICCSVDGE 45
>SB_51248| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1004
Score = 30.7 bits (66), Expect = 2.7
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 16/98 (16%)
Query: 46 LTWEGNEAF-WNVVGGKVTAMITFDFDRDGESELIVGSEDSFIRVL-----KNNQFVAEI 99
L + G F W V + +++I F + ES+ +V +R L KNNQF+ I
Sbjct: 82 LAFLGRSQFEWTV---EKSSIIIDQFGFNSESDTVVKLSQRTLRCLNETKNKNNQFIISI 138
Query: 100 AET--GPVVCLSVISDVR-----FAYGLANGTIGIYED 130
ET G + S I V+ +YGL NGT +D
Sbjct: 139 EETYPGQSLLYSCIQCVQRGENVVSYGLGNGTKNFGDD 176
>SB_42162| Best HMM Match : 7tm_1 (HMM E-Value=0.0047)
Length = 419
Score = 30.7 bits (66), Expect = 2.7
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 60 GKVTAMITFDFDRDGESELIVGSEDSFIRV 89
G + A+ TFD DG ++++VG +D + V
Sbjct: 10 GSILALETFDITADGVADILVGRDDGVVEV 39
>SB_56678| Best HMM Match : WD40 (HMM E-Value=6.4e-22)
Length = 834
Score = 29.1 bits (62), Expect = 8.3
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Query: 70 FDRDGESELIVGSEDSFIRVLKNNQ----FVAEIAETGPVVCLSVISDVRFAYGLANGTI 125
F +DG L S+D ++ + N + A + PV CL VISD A G G++
Sbjct: 98 FSKDG-LHLFTASKDKSLQAIDMNSGSIAHAIKKAHSCPVNCLKVISDHLVATGDDEGSV 156
Query: 126 GIYEDGVRLWRVKSKQN 142
+++ ++ K+N
Sbjct: 157 KVWDSRTVACVMEMKEN 173
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.319 0.134 0.397
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,541,115
Number of Sequences: 59808
Number of extensions: 625537
Number of successful extensions: 1309
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1294
Number of HSP's gapped (non-prelim): 12
length of query: 482
length of database: 16,821,457
effective HSP length: 85
effective length of query: 397
effective length of database: 11,737,777
effective search space: 4659897469
effective search space used: 4659897469
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 62 (29.1 bits)
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