GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002764-TA|BGIBMGA002764-PA|IPR011047|Quinonprotein
alcohol dehydrogenase-like
         (482 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325075-1|ABD14089.1|  181|Apis mellifera complementary sex det...    26   0.61 
DQ325074-1|ABD14088.1|  181|Apis mellifera complementary sex det...    26   0.61 
DQ325073-1|ABD14087.1|  181|Apis mellifera complementary sex det...    26   0.61 
DQ325072-1|ABD14086.1|  181|Apis mellifera complementary sex det...    26   0.61 
DQ325071-1|ABD14085.1|  181|Apis mellifera complementary sex det...    26   0.61 
DQ325070-1|ABD14084.1|  181|Apis mellifera complementary sex det...    26   0.61 
DQ325069-1|ABD14083.1|  181|Apis mellifera complementary sex det...    26   0.61 
DQ325068-1|ABD14082.1|  181|Apis mellifera complementary sex det...    26   0.61 
AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex det...    26   0.61 
AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex det...    26   0.61 
DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex det...    26   0.80 
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    23   4.3  
DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex det...    23   5.7  
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    22   9.9  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    22   9.9  

>DQ325075-1|ABD14089.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 26.2 bits (55), Expect = 0.61
 Identities = 13/44 (29%), Positives = 18/44 (40%)

Query: 357 SEQYHIFEMTKQLPRFAMYTMNYNATNRINYNSSYVTFQITERL 400
           S++  I      L     Y  NYN  N+ NYN  Y      E++
Sbjct: 76  SKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQI 119


>DQ325074-1|ABD14088.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 26.2 bits (55), Expect = 0.61
 Identities = 13/44 (29%), Positives = 18/44 (40%)

Query: 357 SEQYHIFEMTKQLPRFAMYTMNYNATNRINYNSSYVTFQITERL 400
           S++  I      L     Y  NYN  N+ NYN  Y      E++
Sbjct: 76  SKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQI 119


>DQ325073-1|ABD14087.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 26.2 bits (55), Expect = 0.61
 Identities = 13/44 (29%), Positives = 18/44 (40%)

Query: 357 SEQYHIFEMTKQLPRFAMYTMNYNATNRINYNSSYVTFQITERL 400
           S++  I      L     Y  NYN  N+ NYN  Y      E++
Sbjct: 76  SKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQI 119


>DQ325072-1|ABD14086.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 26.2 bits (55), Expect = 0.61
 Identities = 13/44 (29%), Positives = 18/44 (40%)

Query: 357 SEQYHIFEMTKQLPRFAMYTMNYNATNRINYNSSYVTFQITERL 400
           S++  I      L     Y  NYN  N+ NYN  Y      E++
Sbjct: 76  SKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQI 119


>DQ325071-1|ABD14085.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 26.2 bits (55), Expect = 0.61
 Identities = 13/44 (29%), Positives = 18/44 (40%)

Query: 357 SEQYHIFEMTKQLPRFAMYTMNYNATNRINYNSSYVTFQITERL 400
           S++  I      L     Y  NYN  N+ NYN  Y      E++
Sbjct: 76  SKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQI 119


>DQ325070-1|ABD14084.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 26.2 bits (55), Expect = 0.61
 Identities = 13/44 (29%), Positives = 18/44 (40%)

Query: 357 SEQYHIFEMTKQLPRFAMYTMNYNATNRINYNSSYVTFQITERL 400
           S++  I      L     Y  NYN  N+ NYN  Y      E++
Sbjct: 76  SKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQI 119


>DQ325069-1|ABD14083.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 26.2 bits (55), Expect = 0.61
 Identities = 13/44 (29%), Positives = 18/44 (40%)

Query: 357 SEQYHIFEMTKQLPRFAMYTMNYNATNRINYNSSYVTFQITERL 400
           S++  I      L     Y  NYN  N+ NYN  Y      E++
Sbjct: 76  SKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQI 119


>DQ325068-1|ABD14082.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 26.2 bits (55), Expect = 0.61
 Identities = 13/44 (29%), Positives = 18/44 (40%)

Query: 357 SEQYHIFEMTKQLPRFAMYTMNYNATNRINYNSSYVTFQITERL 400
           S++  I      L     Y  NYN  N+ NYN  Y      E++
Sbjct: 76  SKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQI 119


>AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 26.2 bits (55), Expect = 0.61
 Identities = 13/44 (29%), Positives = 18/44 (40%)

Query: 357 SEQYHIFEMTKQLPRFAMYTMNYNATNRINYNSSYVTFQITERL 400
           S++  I      L     Y  NYN  N+ NYN  Y      E++
Sbjct: 309 SKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQI 352


>AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 26.2 bits (55), Expect = 0.61
 Identities = 13/44 (29%), Positives = 18/44 (40%)

Query: 357 SEQYHIFEMTKQLPRFAMYTMNYNATNRINYNSSYVTFQITERL 400
           S++  I      L     Y  NYN  N+ NYN  Y      E++
Sbjct: 309 SKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQI 352


>DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 25.8 bits (54), Expect = 0.80
 Identities = 10/26 (38%), Positives = 13/26 (50%)

Query: 375 YTMNYNATNRINYNSSYVTFQITERL 400
           Y  NYN  N+ NYN  Y      E++
Sbjct: 94  YNNNYNNYNKHNYNKLYYNINYIEQI 119


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 23.4 bits (48), Expect = 4.3
 Identities = 8/17 (47%), Positives = 13/17 (76%)

Query: 355 PNSEQYHIFEMTKQLPR 371
           PN+E+Y+I E+  +L R
Sbjct: 116 PNTEEYYIIEVNARLSR 132


>DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 23.0 bits (47), Expect = 5.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)

Query: 378 NYNATNRINYNSSY 391
           NYN +N  NYN++Y
Sbjct: 88  NYNYSNYNNYNNNY 101


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 22.2 bits (45), Expect = 9.9
 Identities = 8/17 (47%), Positives = 10/17 (58%)

Query: 375 YTMNYNATNRINYNSSY 391
           Y  NYN     NYN++Y
Sbjct: 97  YNNNYNNNYNNNYNNNY 113


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 22.2 bits (45), Expect = 9.9
 Identities = 8/17 (47%), Positives = 10/17 (58%)

Query: 375 YTMNYNATNRINYNSSY 391
           Y  NYN     NYN++Y
Sbjct: 97  YNNNYNNNYNNNYNNNY 113


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.319    0.134    0.397 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,228
Number of Sequences: 429
Number of extensions: 5308
Number of successful extensions: 37
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 20
Number of HSP's gapped (non-prelim): 17
length of query: 482
length of database: 140,377
effective HSP length: 60
effective length of query: 422
effective length of database: 114,637
effective search space: 48376814
effective search space used: 48376814
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 45 (22.2 bits)