Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002763-TA|BGIBMGA002763-PA|IPR001208|MCM
(276 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC16A11.17 |cdc21|mcm4, SPCC24B10.01|MCM complex subunit Cdc21... 204 1e-53
SPBC25D12.03c |mcm7||MCM complex subunit Mcm7|Schizosaccharomyce... 128 1e-30
SPBC211.04c |mcm6|mis5|MCM complex subunit Mcm6 |Schizosaccharom... 119 5e-28
SPAC1B2.05 |mcm5|nda4, SPAC3F10.01|MCM complex subunit Mcm5|Schi... 117 2e-27
SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2 |Schizosacc... 113 3e-26
SPCC1682.02c |mcm3||MCM complex subunit Mcm3|Schizosaccharomyces... 84 2e-17
SPBC30D10.10c |tor1||phosphatidylinositol kinase Tor1|Schizosacc... 31 0.24
SPAP27G11.09c |||GTP cyclohydrolase |Schizosaccharomyces pombe|c... 26 5.1
SPAC23G3.11 |rpn6||19S proteasome regulatory subunit Rpn6|Schizo... 26 6.8
SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces pomb... 25 9.0
>SPCC16A11.17 |cdc21|mcm4, SPCC24B10.01|MCM complex subunit
Cdc21|Schizosaccharomyces pombe|chr 3|||Manual
Length = 911
Score = 204 bits (498), Expect = 1e-53
Identities = 98/202 (48%), Positives = 147/202 (72%), Gaps = 4/202 (1%)
Query: 1 MEQQTLSIAKAGIICQLNARTSILAAANPAESQWNKNKTIVENVQLPHTLMSRFDLIFLV 60
MEQQT+++AKAGII LNARTSILA+ANP S++N + + +N+ LP TL+SRFDL++L+
Sbjct: 626 MEQQTVTVAKAGIITTLNARTSILASANPIGSKYNPDLPVTKNIDLPPTLLSRFDLVYLI 685
Query: 61 LDPQDEVFDRRLASHLVSLYYKDPNDPQDDEDAIDISLMRDYIAFAKEHVQPTLSETAQQ 120
LD DE DR+LA+H+VS+Y +D + D + + + YI +A+ ++ P +SE A +
Sbjct: 686 LDRVDETLDRKLANHIVSMYMEDTPEHATDMEVFSVEFLTSYITYARNNINPVISEEAAK 745
Query: 121 RLIDAYVDMRRVG----SGRGQISAYPRQLESLIRLAEAHARVRLSSVVELIDVDEAARL 176
L++AYV MR++G + +I+A RQLES+IRL+EAHA++ L +VVE+ DV EAARL
Sbjct: 746 ELVNAYVGMRKLGEDVRASEKRITATTRQLESMIRLSEAHAKMHLRNVVEVGDVLEAARL 805
Query: 177 HREALKQSATDPASGRIDVGIL 198
+ A+K ATDPA+G+I + ++
Sbjct: 806 IKTAIKDYATDPATGKISLDLI 827
>SPBC25D12.03c |mcm7||MCM complex subunit Mcm7|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 760
Score = 128 bits (308), Expect = 1e-30
Identities = 73/181 (40%), Positives = 110/181 (60%), Gaps = 7/181 (3%)
Query: 1 MEQQTLSIAKAGIICQLNARTSILAAANPAESQWNKNKTIVENVQLPHTLMSRFDLIFLV 60
MEQQT+SI+KAGI LNARTSILAAANP ++N + N+ LP L+SRFD++FL+
Sbjct: 484 MEQQTISISKAGITTTLNARTSILAAANPLYGRYNPKVAPIHNINLPAALLSRFDILFLI 543
Query: 61 LDPQDEVFDRRLASHLVSLYYKDPNDPQDDEDAIDISLMRDYIAFAKEHVQPTLSETAQQ 120
LD D LA H V+ + P+ D + +D +++R YI+ A+++ +P + +
Sbjct: 544 LDTPSRETDEHLAQH-VTYVHMHNEQPKMDFEPLDPNMIRHYISSARQY-RPVVPKDVCD 601
Query: 121 RLIDAYVDMRR-----VGSGRGQISAYPRQLESLIRLAEAHARVRLSSVVELIDVDEAAR 175
+ AYV +R+ + R PR L +++R+ +A AR+R S+ VE+ DVDEA R
Sbjct: 602 YVTGAYVQLRQNQKRDEANERQFAHTTPRTLLAILRMGQALARLRFSNRVEIGDVDEALR 661
Query: 176 L 176
L
Sbjct: 662 L 662
>SPBC211.04c |mcm6|mis5|MCM complex subunit Mcm6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 892
Score = 119 bits (286), Expect = 5e-28
Identities = 75/184 (40%), Positives = 109/184 (59%), Gaps = 7/184 (3%)
Query: 1 MEQQTLSIAKAGIICQLNARTSILAAANPAESQWNKNKTIVENVQLPHTLMSRFDLIFLV 60
MEQQT+SIAKAGI LNARTSILAAANP ++N+ T+ N+ + +MSRFDL F+V
Sbjct: 557 MEQQTISIAKAGIQATLNARTSILAAANPIGGRYNRKTTLRNNINMSAPIMSRFDLFFVV 616
Query: 61 LDPQDEVFDRRLASHLVSLYYKDPNDPQDDEDAIDISLMRDYIAFAKEHVQPTLSETAQQ 120
LD +E DR LA H+V + ++ +D E + + L R YI +A+ +P L+ +
Sbjct: 617 LDECNESVDRHLAKHIVDI-HRLRDDAMQPEFSTE-QLQR-YIRYART-FKPKLNTESCA 672
Query: 121 RLIDAYVDMR---RVGSGRGQISAYPRQLESLIRLAEAHARVRLSSVVELIDVDEAARLH 177
++ Y +R G+G+ RQLES+IRL+EA AR + V+EA L
Sbjct: 673 EIVKKYKQLRMDDAQGAGKNSYRITVRQLESMIRLSEAIARANCVDDITPAFVNEAYSLL 732
Query: 178 REAL 181
R+++
Sbjct: 733 RQSI 736
>SPAC1B2.05 |mcm5|nda4, SPAC3F10.01|MCM complex subunit
Mcm5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 117 bits (281), Expect = 2e-27
Identities = 73/194 (37%), Positives = 106/194 (54%), Gaps = 8/194 (4%)
Query: 1 MEQQTLSIAKAGIICQLNARTSILAAANPAESQWNKNKTIVENVQLPHTLMSRFDLIFLV 60
MEQQT+SIAKAGI LN+RTS+LAAANP +++ KT EN+ T++SRFD+IF+V
Sbjct: 453 MEQQTISIAKAGITTILNSRTSVLAAANPIFGRYDDMKTPGENIDFQSTILSRFDMIFIV 512
Query: 61 LDPQDEVFDRRLASHLVSLYYKDPNDPQD-DEDAIDISLMRDYIAFAKEHVQPTLSETAQ 119
D DE DR +A H+++L+ + I R YI + + P L A
Sbjct: 513 KDEHDETKDRNIARHVINLHTNLQESSETLAIGEIPFDKFRRYINYCRHKCAPNLDAEAA 572
Query: 120 QRLIDAYVDMR-RV------GSGRGQISAYPRQLESLIRLAEAHARVRLSSVVELIDVDE 172
++L +V +R RV + R I RQLE++IR+ E+ A++ LS + E
Sbjct: 573 EKLSSQFVAIRKRVHQSEQDSNSRSTIPITVRQLEAIIRITESLAKMSLSPIASEAHATE 632
Query: 173 AARLHREALKQSAT 186
A RL + +AT
Sbjct: 633 AIRLFLTSTLAAAT 646
>SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 830
Score = 113 bits (272), Expect = 3e-26
Identities = 70/190 (36%), Positives = 107/190 (56%), Gaps = 14/190 (7%)
Query: 1 MEQQTLSIAKAGIICQLNARTSILAAANPAESQWNKNKTIVENVQLPHTLMSRFDLIFLV 60
MEQQ++SI+KAGI+ L AR +I+AAANP ++N +NV+L ++SRFD++ +V
Sbjct: 615 MEQQSISISKAGIVTTLQARCTIIAAANPIGGRYNTTIPFNQNVELTEPILSRFDILQVV 674
Query: 61 LDPQDEVFDRRLASHLVSLYYK-----DPN---------DPQDDEDAIDISLMRDYIAFA 106
D + D +LA+ +VS + + DPN + D I L+R YI FA
Sbjct: 675 KDTVNPEIDEQLANFVVSSHIRSHPAFDPNMDVLKKVPTETGIDAKPIPQDLLRKYIHFA 734
Query: 107 KEHVQPTLSETAQQRLIDAYVDMRRVGSGRGQISAYPRQLESLIRLAEAHARVRLSSVVE 166
+E V P L + ++++ Y DMRR G R LES IRL+EA A+++LS V
Sbjct: 735 REKVFPRLQQMDEEKISRLYSDMRRESLATGSYPITVRHLESAIRLSEAFAKMQLSEFVR 794
Query: 167 LIDVDEAARL 176
+D+A ++
Sbjct: 795 PSHIDKAIQV 804
>SPCC1682.02c |mcm3||MCM complex subunit Mcm3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 879
Score = 83.8 bits (198), Expect = 2e-17
Identities = 39/80 (48%), Positives = 58/80 (72%)
Query: 1 MEQQTLSIAKAGIICQLNARTSILAAANPAESQWNKNKTIVENVQLPHTLMSRFDLIFLV 60
MEQQT++IAKAGI LNAR S++AAANP Q++ K +N+ LP +++SRFDL+F+V
Sbjct: 437 MEQQTVTIAKAGIHTSLNARCSVIAAANPIYGQYDIRKDPHQNIALPDSMLSRFDLLFIV 496
Query: 61 LDPQDEVFDRRLASHLVSLY 80
D D+ DR L+ H++ ++
Sbjct: 497 TDDIDDKKDRALSEHVLRMH 516
Score = 63.7 bits (148), Expect = 3e-11
Identities = 35/101 (34%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 91 EDAIDISLMRDYIAFAKEHVQPTLSETAQQRLIDAYVDMRR---VGSGRGQISAYPRQLE 147
++ ++I+ +R YI +AK + P L++ + + + Y +R G+ R R LE
Sbjct: 577 KELLNINFVRKYIQYAKSRIHPILNQATAEYITNIYCGLRNDDLQGNQRRTSPLTARTLE 636
Query: 148 SLIRLAEAHARVRLSSVVELIDVDEAARLHREALKQSATDP 188
+LIRL+ AHA+ RLSSVVE+ D A ++ R AL + P
Sbjct: 637 TLIRLSTAHAKARLSSVVEVKDAKAAEKILRYALFREVVKP 677
>SPBC30D10.10c |tor1||phosphatidylinositol kinase
Tor1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2335
Score = 30.7 bits (66), Expect = 0.24
Identities = 41/168 (24%), Positives = 66/168 (39%), Gaps = 8/168 (4%)
Query: 2 EQQTLSIAKAGIICQLNARTSILAAANPAESQWNKNKTIVENVQLPHTLMSRFDLIFLVL 61
+ + IA A CQ+ AR I NP + ++E + S + VL
Sbjct: 491 DNSEIRIAAARTCCQVFARDPICRKTNPLAVE--SVAEVLEKLLTLGIADSDPKIRETVL 548
Query: 62 DPQDEVFDRRLA-SHLVSLYYKDPNDPQDDEDAIDISLMRDYIAFAKEHVQPTLSETAQQ 120
DE FDR LA + + ND I I ++ + HV P+L +T
Sbjct: 549 SLLDERFDRHLAHPDNIRCLFIALNDEVFSIREIAIIIIGRLALYNPAHVMPSLRKT--- 605
Query: 121 RLIDAYVDMRRVGSGRGQISAYPRQLESLIRLAEAHARVRLSSVVELI 168
+I DM G+ R Q + L+ L+ A + + S++ +I
Sbjct: 606 -IIQLLSDMEYSGNSR-QKEESAQLLKLLVSKARTLIKPYIQSIIHVI 651
>SPAP27G11.09c |||GTP cyclohydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 326
Score = 26.2 bits (55), Expect = 5.1
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 227 PLTLTHAKLLHDINAASQITVTREQLDEALRDLQDEGKVVVV 268
PL H++ A S EQLDEA R + +EG V++
Sbjct: 163 PLVRIHSECYTGETAWSARCDCGEQLDEAARLISEEGNGVII 204
>SPAC23G3.11 |rpn6||19S proteasome regulatory subunit
Rpn6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 421
Score = 25.8 bits (54), Expect = 6.8
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 95 DISLMRDYIAFAKEHVQPTLSETAQQRLIDAYVDMRRVGSGRGQISA-YPRQLE-SLIRL 152
DI MR A A+ H +L++ ++ L D ++ R +S+ Y LE +L+R+
Sbjct: 281 DIEAMR---AIAQAHENRSLADF-EKALQDYKPELASDPIIRSHLSSLYDNLLEQNLLRV 336
Query: 153 AEAHARVRLSSVVELI 168
E +RV +S + ELI
Sbjct: 337 VEPFSRVEVSHIAELI 352
>SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 25.4 bits (53), Expect = 9.0
Identities = 10/34 (29%), Positives = 22/34 (64%)
Query: 39 TIVENVQLPHTLMSRFDLIFLVLDPQDEVFDRRL 72
+I +Q+P + +S++ +IF+V D D V+ ++
Sbjct: 229 SITSLLQIPVSQLSQYSVIFIVPDLYDRVYVEKI 262
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.319 0.133 0.373
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,079,589
Number of Sequences: 5004
Number of extensions: 40232
Number of successful extensions: 136
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 119
Number of HSP's gapped (non-prelim): 13
length of query: 276
length of database: 2,362,478
effective HSP length: 72
effective length of query: 204
effective length of database: 2,002,190
effective search space: 408446760
effective search space used: 408446760
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 53 (25.4 bits)
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