Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002763-TA|BGIBMGA002763-PA|IPR001208|MCM
(276 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_05_0265 + 20188160-20188211,20188291-20189019,20189103-201892... 215 4e-56
05_03_0079 + 8212648-8212724,8212844-8212993,8213211-8213351,821... 132 2e-31
02_05_1080 - 33955034-33955117,33955199-33955300,33955381-339555... 120 1e-27
11_04_0331 + 16456577-16456579,16456664-16456911,16457625-164578... 113 1e-25
06_01_0809 - 6100025-6100251,6100456-6100565,6100919-6100986,610... 98 8e-21
05_05_0138 + 22644263-22644460,22644617-22644711,22645786-226459... 97 1e-20
05_05_0208 + 23275931-23275996,23276084-23276196,23276279-232764... 88 8e-18
12_02_0768 - 22988119-22988223,22988337-22988558,22988645-229888... 51 1e-06
08_01_0044 + 301981-302826,302972-303580 30 2.3
06_01_0667 + 4878784-4878900,4879016-4879118,4879256-4879341,487... 30 2.3
10_08_1051 - 22562840-22562971,22563474-22563576,22563701-225637... 29 4.1
12_01_0777 - 7095081-7096259,7096636-7096725,7096827-7096902,709... 28 9.4
07_03_1628 + 28236775-28237002,28237817-28237921,28239330-282394... 28 9.4
07_03_1185 + 24645963-24646316,24647990-24648226,24649027-246491... 28 9.4
04_03_0784 - 19610370-19611548,19611830-19611919,19612001-196120... 28 9.4
>01_05_0265 +
20188160-20188211,20188291-20189019,20189103-20189231,
20189857-20189938,20190034-20190166,20190269-20190340,
20190478-20190573,20190651-20190764,20190838-20191050,
20191144-20191242,20191328-20191488,20191589-20191685,
20191828-20191989,20192068-20192148,20192242-20192320,
20192414-20192550,20192638-20192688,20192776-20192844,
20193583-20193700,20194142-20194197
Length = 909
Score = 215 bits (524), Expect = 4e-56
Identities = 121/274 (44%), Positives = 173/274 (63%), Gaps = 10/274 (3%)
Query: 1 MEQQTLSIAKAGIICQLNARTSILAAANPAESQWNKNKTIVENVQLPHTLMSRFDLIFLV 60
MEQQT+SIAKAGII LNARTS+LA ANP ES++N ++++N+ LP TL+SRFDLI+L+
Sbjct: 575 MEQQTVSIAKAGIIASLNARTSVLACANPTESRYNPRLSVIDNIHLPPTLLSRFDLIYLI 634
Query: 61 LDPQDEVFDRRLASHLVSLYYKDPNDPQDDEDAIDISLMRDYIAFAKEHVQPTLSETAQQ 120
LD DE DRRLA H+VSL++++PN ++ + +D+ + YI++A++H+QP LS+ A +
Sbjct: 635 LDKADEQTDRRLAKHIVSLHFENPN--IEELEVLDLPTLVAYISYARKHIQPQLSDEAAE 692
Query: 121 RLIDAYVDMRRVGSGRGQ----ISAYPRQLESLIRLAEAHARVRLSSVVELIDVDEAARL 176
L YV+MR+ G+ G I+A RQ+ESLIRL+EA AR+R S +VE+ DV EA RL
Sbjct: 693 ELTRGYVEMRKRGNSPGSRKKVITATARQIESLIRLSEALARMRFSEMVEVQDVVEAFRL 752
Query: 177 HREALKQSATDPASGRIDVGILTCGXXXXXXXXXXXXXXXXXXXI---QPLHKPLTLTHA 233
A++QSATD A+G ID+ ++ G + L P ++
Sbjct: 753 LEVAMQQSATDHATGTIDMDLIMTGISASERQRRDNLVAATRNLVMEKMQLGGP-SVRMI 811
Query: 234 KLLHDINAASQITVTREQLDEALRDLQDEGKVVV 267
+LL +I S + V L AL L EG VV+
Sbjct: 812 ELLEEIRKQSSMEVHLHDLRGALGTLMTEGAVVI 845
>05_03_0079 +
8212648-8212724,8212844-8212993,8213211-8213351,
8213658-8213820,8213901-8214094,8214174-8214369,
8214462-8214539,8214933-8215162,8215574-8215688,
8215878-8215952,8216032-8216172,8216309-8216512,
8216586-8216747,8216787-8216794,8217099-8217223,
8217316-8217438,8218177-8218307,8218527-8218658
Length = 814
Score = 132 bits (320), Expect = 2e-31
Identities = 78/175 (44%), Positives = 112/175 (64%), Gaps = 7/175 (4%)
Query: 1 MEQQTLSIAKAGIICQLNARTSILAAANPAESQWNKNKTIVENVQLPHTLMSRFDLIFLV 60
MEQQT+SI KAGI LNARTSILAAANP +++K+K + NV LP ++SRFDL++++
Sbjct: 480 MEQQTISITKAGIQATLNARTSILAAANPTGGRYDKSKPLKYNVALPPAILSRFDLVYIM 539
Query: 61 LDPQDEVFDRRLASHLVSLYYKDPNDPQDDEDAIDISLMRDYIAFAKEHVQPTLSETAQQ 120
+D DE D +A H+V ++ K + A + ++ YIAFAK ++P LS A++
Sbjct: 540 IDEPDENTDYHIAHHIVRVHQK---REEALAPAFSTAELKRYIAFAKS-LKPQLSSEAKK 595
Query: 121 RLIDAYVDMRRVGSGRGQISAY---PRQLESLIRLAEAHARVRLSSVVELIDVDE 172
L+++YV +RR S G AY RQLE+LIRL+EA AR L V+ ++ E
Sbjct: 596 VLVESYVTLRRGDSTPGTRVAYRMTVRQLEALIRLSEAIARSHLERVIMHVESSE 650
>02_05_1080 -
33955034-33955117,33955199-33955300,33955381-33955510,
33955674-33955783,33955827-33955950,33956042-33956136,
33956205-33956300,33956419-33956551,33956668-33956759,
33956844-33956948,33957201-33957335,33957421-33957526,
33957621-33957748,33957860-33957958,33958049-33958228,
33958303-33958446,33958533-33958647,33958739-33958905
Length = 714
Score = 120 bits (289), Expect = 1e-27
Identities = 77/195 (39%), Positives = 117/195 (60%), Gaps = 19/195 (9%)
Query: 1 MEQQTLSIAKAGIICQLNARTSILAAANPAESQWNKNKTIVENVQLPHTLMSRFDLIFLV 60
MEQQT+SIAKAGI LN+RTS+LAAANP +++ KT +N+ L T++SRFDLIF+V
Sbjct: 431 MEQQTISIAKAGITTVLNSRTSVLAAANPIAGRYDDLKTAQDNIDLQTTILSRFDLIFIV 490
Query: 61 LDPQDEVFDRRLASHLVSLYYKDPNDPQDDEDAID-ISLMRDYIAFAKEHVQPTLSETAQ 119
D + D+R+ASH++ ++ + DA + + ++ YI + + +P LSE A
Sbjct: 491 KDVRMYDQDKRIASHIIKVHASGAAASSKNTDASEGENWLKRYIEYCRVTCKPRLSEKAA 550
Query: 120 QRLIDAYVD---------------MRRVGSGRGQISAYP---RQLESLIRLAEAHARVRL 161
+ L + YV+ MR+ G+ +A P RQLE++IRL+E+ A++RL
Sbjct: 551 EMLQNKYVEIRQARAKDFSLSLTKMRQQAHETGRAAAIPITVRQLEAIIRLSESLAKMRL 610
Query: 162 SSVVELIDVDEAARL 176
+SV V+EA RL
Sbjct: 611 TSVATPEHVEEAFRL 625
>11_04_0331 +
16456577-16456579,16456664-16456911,16457625-16457812,
16458293-16458489,16458579-16458768,16458865-16459084,
16459169-16459376,16459508-16459642,16459725-16459916,
16459999-16460171,16460266-16460454,16460539-16460655,
16460734-16460818,16460900-16461052,16461135-16461260,
16461391-16461573,16461823-16461984,16462098-16462214
Length = 961
Score = 113 bits (273), Expect = 1e-25
Identities = 68/196 (34%), Positives = 108/196 (55%), Gaps = 20/196 (10%)
Query: 1 MEQQTLSIAKAGIICQLNARTSILAAANPAESQWNKNKTIVENVQLPHTLMSRFDLIFLV 60
MEQQ++SI+KAGI+ L AR S++AAANP +++ +KT +NV+L ++SRFD++ +V
Sbjct: 655 MEQQSISISKAGIVTSLQARCSVIAAANPIGGRYDSSKTFTQNVELTDPIISRFDVLCVV 714
Query: 61 LDPQDEVFDRRLASHLVSLYYKD-----------PNDPQD---------DEDAIDISLMR 100
D D D LA +V + + P D +D D D + +++
Sbjct: 715 KDIVDPFTDEMLARFVVDSHARSQPKGANLEDRVPTDVEDDPLAAARQADPDILSQDMLK 774
Query: 101 DYIAFAKEHVQPTLSETAQQRLIDAYVDMRRVGSGRGQISAYPRQLESLIRLAEAHARVR 160
YI +AK +V P + + ++ Y ++RR S + R +ES+IR++EAHAR+
Sbjct: 775 KYITYAKLNVFPKIHDADLDKISHVYAELRRESSHGQGVPIAVRHIESIIRMSEAHARMH 834
Query: 161 LSSVVELIDVDEAARL 176
L S V DVD A R+
Sbjct: 835 LRSYVSQEDVDMAIRV 850
>06_01_0809 -
6100025-6100251,6100456-6100565,6100919-6100986,
6101108-6101229,6101446-6101527,6101629-6101695,
6102811-6102883,6103032-6103148,6104167-6104259,
6104430-6104495,6105121-6105218,6105917-6106016,
6106486-6106660,6106828-6106894,6107574-6107712,
6107830-6107926,6107992-6108130,6108212-6108363
Length = 663
Score = 97.9 bits (233), Expect = 8e-21
Identities = 48/142 (33%), Positives = 90/142 (63%), Gaps = 3/142 (2%)
Query: 1 MEQQTLSIAKAGIICQLNARTSILAAANPAESQWNKNKTIVENVQLPHTLMSRFDLIFLV 60
MEQQT+SIAKAG++ LN RT++ A NP + Q++ N+++ N L L+SRFD++ ++
Sbjct: 452 MEQQTISIAKAGLVTTLNTRTTVFGATNP-KGQYDPNESLSVNTTLSGPLLSRFDIVLVL 510
Query: 61 LDPQDEVFDRRLASHLVSLYYKDPNDPQDDEDAI-DISLMRDYIAFAKEHVQPTLSETAQ 119
LD +++ +D+ ++SH+++ ++ D + + +S++R YI + K+H +P L++ A
Sbjct: 511 LDTKNKKWDKIVSSHILAENTEEKKGKTSDPEVMWTLSMLRRYIHYVKQHFKPVLTKEA- 569
Query: 120 QRLIDAYVDMRRVGSGRGQISA 141
+R+I +Y +R R A
Sbjct: 570 ERVISSYYQRQRQSGTRNAAHA 591
>05_05_0138 +
22644263-22644460,22644617-22644711,22645786-22645949,
22646725-22646970,22647600-22647944,22648516-22648586,
22648676-22648794,22650508-22650637,22650806-22650857,
22650974-22651136,22651244-22651418,22651772-22651942,
22652275-22652388,22652559-22652609
Length = 697
Score = 97.1 bits (231), Expect = 1e-20
Identities = 40/83 (48%), Positives = 65/83 (78%)
Query: 1 MEQQTLSIAKAGIICQLNARTSILAAANPAESQWNKNKTIVENVQLPHTLMSRFDLIFLV 60
MEQQ +S+AKAG++ L+ARTS+LAAANP +++ KT+ EN+++ L+SRFDL+F++
Sbjct: 379 MEQQCVSVAKAGLVASLSARTSVLAAANPVGGHYDRAKTVNENLKMSAALLSRFDLVFIL 438
Query: 61 LDPQDEVFDRRLASHLVSLYYKD 83
LD DE+ D+R++ H+++L+ D
Sbjct: 439 LDKPDELLDKRVSDHIIALHSND 461
Score = 62.5 bits (145), Expect = 4e-10
Identities = 39/105 (37%), Positives = 53/105 (50%), Gaps = 4/105 (3%)
Query: 87 PQDDEDAIDIS--LMRDYIAFAKEHVQPTLS--ETAQQRLIDAYVDMRRVGSGRGQISAY 142
P+ D+D + L+R YI++A+ HV P +S A L Y+D+R+
Sbjct: 498 PEKDKDFCPLPGPLLRKYISYARSHVNPRISMPSPAADSLQKFYLDLRKQSDSADGTPIT 557
Query: 143 PRQLESLIRLAEAHARVRLSSVVELIDVDEAARLHREALKQSATD 187
RQLESL+RLAEA ARV L V L D E + E+L D
Sbjct: 558 ARQLESLVRLAEARARVDLREEVTLEDAKEVIDIMTESLYDKCVD 602
>05_05_0208 +
23275931-23275996,23276084-23276196,23276279-23276459,
23276590-23276674,23276974-23277104,23277194-23277432,
23277512-23277748,23277838-23277992,23278039-23278271,
23278359-23278521,23278613-23278818,23278960-23279019,
23279106-23279198,23279406-23279569,23280070-23280138,
23280241-23280382,23280490-23280546
Length = 797
Score = 87.8 bits (208), Expect = 8e-18
Identities = 39/80 (48%), Positives = 59/80 (73%)
Query: 1 MEQQTLSIAKAGIICQLNARTSILAAANPAESQWNKNKTIVENVQLPHTLMSRFDLIFLV 60
MEQQT++IAKAGI LNAR S++AAANP ++++ T +N+ LP +L+SRFDL+F+V
Sbjct: 448 MEQQTVTIAKAGIHASLNARCSVIAAANPIYGTYDRSLTPTKNIGLPDSLLSRFDLLFIV 507
Query: 61 LDPQDEVFDRRLASHLVSLY 80
LD D DR+++ H+ ++
Sbjct: 508 LDQMDPEIDRQISEHVARMH 527
Score = 56.8 bits (131), Expect = 2e-08
Identities = 29/90 (32%), Positives = 52/90 (57%), Gaps = 4/90 (4%)
Query: 91 EDAIDISLMRDYIAFAKEHVQPTLSETAQQRLIDAYVDMRRVG----SGRGQISAYPRQL 146
+D + + ++ YI +AK +QP L++ A + +Y ++R G SG G + R L
Sbjct: 577 QDRLTVKFLKKYIHYAKNLIQPRLTDEASDHIATSYAELRDGGANAKSGGGTLPITARTL 636
Query: 147 ESLIRLAEAHARVRLSSVVELIDVDEAARL 176
E++IRL+ AHA+++L V DV+ A ++
Sbjct: 637 ETIIRLSTAHAKMKLRHEVLKTDVEAALQV 666
>12_02_0768 -
22988119-22988223,22988337-22988558,22988645-22988810,
22989176-22989181,22989281-22989453,22989737-22989928,
22990034-22990211,22990302-22990444,22990666-22990755,
22990869-22990991,22991391-22991568,22992213-22992442,
22992557-22992616,22992731-22992798,22992908-22992953
Length = 659
Score = 50.8 bits (116), Expect = 1e-06
Identities = 24/30 (80%), Positives = 27/30 (90%)
Query: 1 MEQQTLSIAKAGIICQLNARTSILAAANPA 30
MEQQT+SIAKAGI LNART++LAAANPA
Sbjct: 464 MEQQTVSIAKAGITTSLNARTAVLAAANPA 493
Score = 39.1 bits (87), Expect = 0.004
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 100 RDYIAFAKEHVQPTLSETAQQRLIDAYVDMRRVGSGRGQISAYP--RQLESLIRLAEAHA 157
R YI+ A+ V P++ ++ + AY +R+ + +Y R L S++R++ A A
Sbjct: 496 RAYISTARR-VVPSVPRELEEYIATAYSSIRQEEAKSNAPHSYTTIRTLLSILRISIALA 554
Query: 158 RVRLSSVVELIDVDEAARL 176
R+R S V DVDEA RL
Sbjct: 555 RLRFSETVAQSDVDEALRL 573
>08_01_0044 + 301981-302826,302972-303580
Length = 484
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 65 DEVFDRRLASHLVSLYYKDPNDPQDDEDAIDISLM-RDYIAFAKEHVQPTL 114
D++ D+ + H L + +D Q D D IDI L ++ F +++++ L
Sbjct: 231 DQLLDKLIDDHATRLVRRHDHDQQQDSDFIDILLYHQEEYGFTRDNIKAIL 281
>06_01_0667 +
4878784-4878900,4879016-4879118,4879256-4879341,
4879434-4879496,4879589-4879831,4880639-4880728,
4881403-4881600
Length = 299
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 83 DPNDPQDDEDAIDISLMRDYIA-FAKEHVQPTLSETAQQRLIDAYVDM 129
D ND DD+D D+S M D++ A+ Q T +E+ ++ L +VDM
Sbjct: 90 DGNDGDDDDDEADLSGMGDFLGEMAQMMSQATPAESFEE-LQQLFVDM 136
>10_08_1051 -
22562840-22562971,22563474-22563576,22563701-22563768,
22563896-22564053,22564706-22564895,22565162-22566205
Length = 564
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/47 (34%), Positives = 24/47 (51%)
Query: 146 LESLIRLAEAHARVRLSSVVELIDVDEAARLHREALKQSATDPASGR 192
+E + + ++ RVR VE I A ++ R LK S D +SGR
Sbjct: 515 MEYVAKQVASYKRVRKVIFVEAIPKSAAGKVLRRLLKDSLVDASSGR 561
>12_01_0777 - 7095081-7096259,7096636-7096725,7096827-7096902,
7097150-7097367,7097502-7097717,7097922-7098107,
7098181-7098303,7098399-7098514,7099254-7099832,
7101485-7101517,7102485-7103679,7103732-7103797,
7104843-7104905,7105328-7105411
Length = 1407
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/44 (31%), Positives = 24/44 (54%)
Query: 226 KPLTLTHAKLLHDINAASQITVTREQLDEALRDLQDEGKVVVVS 269
+PL +LL D A + ++ D A+ D+ EGKV+V++
Sbjct: 1349 RPLRRAIMRLLEDSLAEKMLAGEVKEGDSAIVDVDSEGKVIVLN 1392
>07_03_1628 +
28236775-28237002,28237817-28237921,28239330-28239410,
28240530-28240607,28241629-28241688,28241785-28242060,
28243511-28243607,28243710-28243765
Length = 326
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 152 LAEAHARVRLSSVVELIDVDEAARLHREALKQSATDPASGRID 194
+ EAH R + S + L VD+ R++ ++A D ++D
Sbjct: 164 MTEAHLRAQTPSEISLHTVDQTVRMYVSTFVKTAEDTYHRKVD 206
>07_03_1185 +
24645963-24646316,24647990-24648226,24649027-24649170,
24649296-24649427,24649524-24649811
Length = 384
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 237 HDINAASQITVTREQLDEALRDLQDEGKVVVVSH 270
+D N S +T E L L+ L D KV++V H
Sbjct: 170 YDTNKISSLTQYAEPLTSYLKSLGDNEKVILVGH 203
>04_03_0784 -
19610370-19611548,19611830-19611919,19612001-19612076,
19612917-19613134,19613333-19613548,19613974-19614159,
19614242-19614364,19614456-19614571,19615126-19615588
Length = 888
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/44 (31%), Positives = 24/44 (54%)
Query: 226 KPLTLTHAKLLHDINAASQITVTREQLDEALRDLQDEGKVVVVS 269
+PL +LL D A + ++ D A+ D+ EGKV+V++
Sbjct: 830 RPLRRAIMRLLEDSLAEKMLAGEVKEGDSAIVDVDSEGKVIVLN 873
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.319 0.133 0.373
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,941,621
Number of Sequences: 37544
Number of extensions: 255832
Number of successful extensions: 724
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 695
Number of HSP's gapped (non-prelim): 19
length of query: 276
length of database: 14,793,348
effective HSP length: 81
effective length of query: 195
effective length of database: 11,752,284
effective search space: 2291695380
effective search space used: 2291695380
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 59 (27.9 bits)
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