Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002763-TA|BGIBMGA002763-PA|IPR001208|MCM
(276 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC025716-11|AAK39605.1| 823|Caenorhabditis elegans Yeast mcm (l... 279 2e-75
AF016427-3|AAB65356.1| 730|Caenorhabditis elegans Yeast mcm (li... 149 2e-36
AL023828-7|CAA19452.1| 881|Caenorhabditis elegans Hypothetical ... 118 6e-27
Z29095-13|CAA82357.1| 810|Caenorhabditis elegans Hypothetical p... 116 2e-26
Z22181-15|CAA80191.1| 810|Caenorhabditis elegans Hypothetical p... 116 2e-26
Z22181-14|CAI46590.1| 516|Caenorhabditis elegans Hypothetical p... 116 2e-26
AF326940-1|AAG49390.1| 810|Caenorhabditis elegans replication l... 116 2e-26
Z50874-6|CAA90765.1| 759|Caenorhabditis elegans Hypothetical pr... 99 2e-21
Z81039-6|CAB02770.1| 812|Caenorhabditis elegans Hypothetical pr... 79 3e-15
Z49130-8|CAA88971.1| 387|Caenorhabditis elegans Hypothetical pr... 34 0.13
U13876-16|AAW88394.1| 420|Caenorhabditis elegans Proteasome reg... 29 2.7
U13876-15|AAA21173.2| 438|Caenorhabditis elegans Proteasome reg... 29 2.7
U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone methyl... 29 3.6
U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone methyl... 29 3.6
Z82062-5|CAB54319.4| 582|Caenorhabditis elegans Hypothetical pr... 28 6.3
>AC025716-11|AAK39605.1| 823|Caenorhabditis elegans Yeast mcm
(licensing factor) relatedprotein 4 protein.
Length = 823
Score = 279 bits (683), Expect = 2e-75
Identities = 140/265 (52%), Positives = 188/265 (70%), Gaps = 4/265 (1%)
Query: 1 MEQQTLSIAKAGIICQLNARTSILAAANPAESQWNKNKTIVENVQLPHTLMSRFDLIFLV 60
MEQQTLSIAKAGIICQLNAR S+LAAANP +S+WN+NKTIVEN+ LPHTL+SRFDLIFL+
Sbjct: 550 MEQQTLSIAKAGIICQLNARASVLAAANPVDSKWNRNKTIVENITLPHTLLSRFDLIFLI 609
Query: 61 LDPQDEVFDRRLASHLVSLYYKDPNDPQDDEDAIDISLMRDYIAFAKEHVQPTLSETAQQ 120
+D QDE+ DRRL +HLVSLY+++ + Q+ + +D++L+RDYIA+AK ++ P LSE A Q
Sbjct: 610 VDAQDEMQDRRLGNHLVSLYFENDGN-QEKTEHVDMNLLRDYIAYAKANIHPKLSEEASQ 668
Query: 121 RLIDAYVDMRRVGSGRGQISAYPRQLESLIRLAEAHARVRLSSVVELIDVDEAARLHREA 180
+I+ Y+ MR+ G+ GQI+AYPRQLESLIRL+EAHA++RLS V + DV++A L REA
Sbjct: 669 FIIEKYLFMRKAGAQHGQITAYPRQLESLIRLSEAHAKIRLSQEVSVDDVEKAFTLWREA 728
Query: 181 LKQSATDPASGRIDVGILTCGXXXXXXXXXXXXXXXXXXXIQPLHKPLTLTHAKLLHDIN 240
LKQSA DP++GR+DV IL G ++ +T L H +
Sbjct: 729 LKQSAVDPSTGRVDVAILASGMSASGRKAVEAMCEAVLKQLKTAKG--FVTSKALFHTLK 786
Query: 241 AASQITVTREQLDEALRDLQDEGKV 265
+A + T RE DEA+ +L + +
Sbjct: 787 SADK-TCQREVFDEAINELSKKESI 810
>AF016427-3|AAB65356.1| 730|Caenorhabditis elegans Yeast mcm
(licensing factor) relatedprotein 7 protein.
Length = 730
Score = 149 bits (362), Expect = 2e-36
Identities = 76/177 (42%), Positives = 117/177 (66%), Gaps = 2/177 (1%)
Query: 1 MEQQTLSIAKAGIICQLNARTSILAAANPAESQWNKNKTIVENVQLPHTLMSRFDLIFLV 60
MEQQT+SIAKAGI+ LNART+I+AAANPA ++N N++I +NV LP L+SRFDLI L+
Sbjct: 471 MEQQTISIAKAGIMTTLNARTAIIAAANPAYGRYNPNRSIEQNVDLPAALLSRFDLILLM 530
Query: 61 LDPQDEVFDRRLASHLVSLYYKDPNDPQDDEDAIDISLMRDYIAFAKEHVQPTLSETAQQ 120
D D D+ LA H+ ++ + ++ +D I + +R+YI+ K + PT+ ++
Sbjct: 531 QDKADRENDKILAEHITYVHQHGCHPNREKKDLISLETLREYISLCKTYT-PTVDPALRE 589
Query: 121 RLIDAYVDMRR-VGSGRGQISAYPRQLESLIRLAEAHARVRLSSVVELIDVDEAARL 176
R+++AYV+MRR PR + ++R+A A A++RLS++V+ DV+EA RL
Sbjct: 590 RIVEAYVEMRRDARYSSDPTFVSPRMILGIVRMATARAKLRLSTIVDESDVEEALRL 646
>AL023828-7|CAA19452.1| 881|Caenorhabditis elegans Hypothetical
protein Y17G7B.5a protein.
Length = 881
Score = 118 bits (283), Expect = 6e-27
Identities = 68/197 (34%), Positives = 109/197 (55%), Gaps = 17/197 (8%)
Query: 1 MEQQTLSIAKAGIICQLNARTSILAAANPAESQWNKNKTIVENVQLPHTLMSRFDLIFLV 60
MEQQ++SI+KAGI+ L+AR +++AA+NP ++N +T ENV L ++SRFD++ ++
Sbjct: 579 MEQQSISISKAGIVTSLHARCTVIAASNPIGGRYNPTRTFAENVDLTEPILSRFDVLCVI 638
Query: 61 LDPQDEVFDRRLASHLVS---LYYKD-----------PNDPQDDEDAIDI---SLMRDYI 103
D D V D RLA +V ++ D D D+ + + L+R YI
Sbjct: 639 RDSVDSVEDERLAKFVVGNHRTHHPDAKKIVKEGDELEEDQMDERTGVRLIPQDLLRKYI 698
Query: 104 AFAKEHVQPTLSETAQQRLIDAYVDMRRVGSGRGQISAYPRQLESLIRLAEAHARVRLSS 163
+A+E PTL E ++ + + MR+ G ++ R +ES+IRL+EAHA++ L S
Sbjct: 699 IYAREKCHPTLPEQHSEKFSNIFAQMRKESMATGSVAITVRHVESMIRLSEAHAKLHLRS 758
Query: 164 VVELIDVDEAARLHREA 180
V D A R+ E+
Sbjct: 759 YVNDEDCAAAIRVMLES 775
>Z29095-13|CAA82357.1| 810|Caenorhabditis elegans Hypothetical
protein ZK632.1a protein.
Length = 810
Score = 116 bits (278), Expect = 2e-26
Identities = 68/184 (36%), Positives = 112/184 (60%), Gaps = 5/184 (2%)
Query: 1 MEQQTLSIAKAGIICQLNARTSILAAANPAESQWNKNKTIVENVQLPHTLMSRFDLIFLV 60
MEQQT+SI KAG+ LNAR SILAAANP ++++++ + NVQ+ +MSRFDL F++
Sbjct: 478 MEQQTISITKAGVKATLNARASILAAANPVNGRYDRSRPLKYNVQMSAPIMSRFDLFFVL 537
Query: 61 LDPQDEVFDRRLASHLVSLYYKDPNDPQDDEDAIDISLMRDYIAFAKEHVQPTLSETAQQ 120
+D +EV D +A ++ ++ ++ + + I ++ YIAFA+ +P +S+ A +
Sbjct: 538 VDECNEVTDYAIARRILD-NHRAISEHTERDSVYKIDDIKKYIAFAR-CFKPKISDKAAE 595
Query: 121 RLIDAYVDMRRVGSGRGQISAY---PRQLESLIRLAEAHARVRLSSVVELIDVDEAARLH 177
L+ Y +R S S++ RQLESL+RL+EA AR+ V + V++AA L
Sbjct: 596 TLVREYKKLRMSDSNNAATSSWRITVRQLESLVRLSEALARLHCGKEVLVEHVEKAAELL 655
Query: 178 REAL 181
+++
Sbjct: 656 NKSI 659
>Z22181-15|CAA80191.1| 810|Caenorhabditis elegans Hypothetical
protein ZK632.1a protein.
Length = 810
Score = 116 bits (278), Expect = 2e-26
Identities = 68/184 (36%), Positives = 112/184 (60%), Gaps = 5/184 (2%)
Query: 1 MEQQTLSIAKAGIICQLNARTSILAAANPAESQWNKNKTIVENVQLPHTLMSRFDLIFLV 60
MEQQT+SI KAG+ LNAR SILAAANP ++++++ + NVQ+ +MSRFDL F++
Sbjct: 478 MEQQTISITKAGVKATLNARASILAAANPVNGRYDRSRPLKYNVQMSAPIMSRFDLFFVL 537
Query: 61 LDPQDEVFDRRLASHLVSLYYKDPNDPQDDEDAIDISLMRDYIAFAKEHVQPTLSETAQQ 120
+D +EV D +A ++ ++ ++ + + I ++ YIAFA+ +P +S+ A +
Sbjct: 538 VDECNEVTDYAIARRILD-NHRAISEHTERDSVYKIDDIKKYIAFAR-CFKPKISDKAAE 595
Query: 121 RLIDAYVDMRRVGSGRGQISAY---PRQLESLIRLAEAHARVRLSSVVELIDVDEAARLH 177
L+ Y +R S S++ RQLESL+RL+EA AR+ V + V++AA L
Sbjct: 596 TLVREYKKLRMSDSNNAATSSWRITVRQLESLVRLSEALARLHCGKEVLVEHVEKAAELL 655
Query: 178 REAL 181
+++
Sbjct: 656 NKSI 659
>Z22181-14|CAI46590.1| 516|Caenorhabditis elegans Hypothetical
protein ZK632.1b protein.
Length = 516
Score = 116 bits (278), Expect = 2e-26
Identities = 68/184 (36%), Positives = 112/184 (60%), Gaps = 5/184 (2%)
Query: 1 MEQQTLSIAKAGIICQLNARTSILAAANPAESQWNKNKTIVENVQLPHTLMSRFDLIFLV 60
MEQQT+SI KAG+ LNAR SILAAANP ++++++ + NVQ+ +MSRFDL F++
Sbjct: 184 MEQQTISITKAGVKATLNARASILAAANPVNGRYDRSRPLKYNVQMSAPIMSRFDLFFVL 243
Query: 61 LDPQDEVFDRRLASHLVSLYYKDPNDPQDDEDAIDISLMRDYIAFAKEHVQPTLSETAQQ 120
+D +EV D +A ++ ++ ++ + + I ++ YIAFA+ +P +S+ A +
Sbjct: 244 VDECNEVTDYAIARRILD-NHRAISEHTERDSVYKIDDIKKYIAFAR-CFKPKISDKAAE 301
Query: 121 RLIDAYVDMRRVGSGRGQISAY---PRQLESLIRLAEAHARVRLSSVVELIDVDEAARLH 177
L+ Y +R S S++ RQLESL+RL+EA AR+ V + V++AA L
Sbjct: 302 TLVREYKKLRMSDSNNAATSSWRITVRQLESLVRLSEALARLHCGKEVLVEHVEKAAELL 361
Query: 178 REAL 181
+++
Sbjct: 362 NKSI 365
>AF326940-1|AAG49390.1| 810|Caenorhabditis elegans replication
licensing factor MCM2/3/5-type protein protein.
Length = 810
Score = 116 bits (278), Expect = 2e-26
Identities = 68/184 (36%), Positives = 112/184 (60%), Gaps = 5/184 (2%)
Query: 1 MEQQTLSIAKAGIICQLNARTSILAAANPAESQWNKNKTIVENVQLPHTLMSRFDLIFLV 60
MEQQT+SI KAG+ LNAR SILAAANP ++++++ + NVQ+ +MSRFDL F++
Sbjct: 478 MEQQTISITKAGVKATLNARASILAAANPVNGRYDRSRPLKYNVQMSAPIMSRFDLFFVL 537
Query: 61 LDPQDEVFDRRLASHLVSLYYKDPNDPQDDEDAIDISLMRDYIAFAKEHVQPTLSETAQQ 120
+D +EV D +A ++ ++ ++ + + I ++ YIAFA+ +P +S+ A +
Sbjct: 538 VDECNEVTDYAIARRILD-NHRAISEHTERDSVYKIDDIKKYIAFAR-CFKPKISDKAAE 595
Query: 121 RLIDAYVDMRRVGSGRGQISAY---PRQLESLIRLAEAHARVRLSSVVELIDVDEAARLH 177
L+ Y +R S S++ RQLESL+RL+EA AR+ V + V++AA L
Sbjct: 596 TLVREYKKLRMSDSNNAATSSWRITVRQLESLVRLSEALARLHCGKEVLVEHVEKAAELL 655
Query: 178 REAL 181
+++
Sbjct: 656 NKSI 659
>Z50874-6|CAA90765.1| 759|Caenorhabditis elegans Hypothetical
protein R10E4.4 protein.
Length = 759
Score = 99 bits (238), Expect = 2e-21
Identities = 73/224 (32%), Positives = 120/224 (53%), Gaps = 34/224 (15%)
Query: 1 MEQQTLSIAKAGIICQLNARTSILAAANPAESQWNKNKTIVENVQLPHTLMSRFDLIFLV 60
MEQQT+SIAKAGI LN+R S+LAAAN +W++++ +N+ T++SRFD+I++V
Sbjct: 461 MEQQTISIAKAGITTTLNSRCSVLAAANSVYGRWDESRG-DDNIDFMPTILSRFDMIYIV 519
Query: 61 LDPQDEVFDRRLASHLVSLYY-------KD----PNDPQDDEDAI----------DISLM 99
D D + D LA H++ ++ +D P D D + I +
Sbjct: 520 KDTHDVLKDATLAKHVIEVHVNASAAKERDIAGVPKTATTDSDGVMTMFDTDGFLTIEFL 579
Query: 100 RDYIAFAKEHVQPTLSETAQQRLIDAYVDMRR-------VGSG-RGQISAYP---RQLES 148
+ ++ +A+ + P L+ A ++L++ YV MR SG + SA P RQLE+
Sbjct: 580 KKFVTYARLNCGPRLTPQASEKLVNHYVKMRNPVVNADAFKSGKKAHNSAIPITVRQLEA 639
Query: 149 LIRLAEAHARVRLSSVVELIDVDEAARLHR-EALKQSATDPASG 191
++R+AE+ A++ L V+EA RL R ++ +AT +G
Sbjct: 640 IVRIAESIAKMELQQFATDKHVEEALRLFRVSTIEAAATGNLAG 683
>Z81039-6|CAB02770.1| 812|Caenorhabditis elegans Hypothetical
protein C25D7.6 protein.
Length = 812
Score = 79.4 bits (187), Expect = 3e-15
Identities = 38/80 (47%), Positives = 57/80 (71%)
Query: 1 MEQQTLSIAKAGIICQLNARTSILAAANPAESQWNKNKTIVENVQLPHTLMSRFDLIFLV 60
MEQ ++I+KAGI +LNAR S+LAAANP ++N K+ +EN+ + +L+SRFDLIF++
Sbjct: 429 MEQGRVTISKAGIHAKLNARCSVLAAANPVYGRYNPFKSPMENIGMQDSLLSRFDLIFVL 488
Query: 61 LDPQDEVFDRRLASHLVSLY 80
LD D D +A H++ L+
Sbjct: 489 LDEHDADKDANVAEHVLKLH 508
Score = 47.6 bits (108), Expect = 1e-05
Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 90 DEDAIDISLMRDYIAFAKEHVQPTLSETAQQRLIDAYVDMRRVGSGR-GQISAYP---RQ 145
D + + MR YI A+ VQP L++ A + + + Y D+R + Q P RQ
Sbjct: 556 DTKILTMDFMRKYIHLARS-VQPKLTDEATEYISEVYADIRSFDITKTDQERTMPVTARQ 614
Query: 146 LESLIRLAEAHARVRLSSVVELIDVDEAARL 176
LE+LIRL+ A A+ R S VE D ++A L
Sbjct: 615 LETLIRLSTAIAKARFSKKVEREDTEKAYNL 645
>Z49130-8|CAA88971.1| 387|Caenorhabditis elegans Hypothetical
protein T06D8.8 protein.
Length = 387
Score = 33.9 bits (74), Expect = 0.13
Identities = 26/109 (23%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 82 KDPNDPQDDEDAIDISLMRDYIAFAKEHVQPTLSETAQQRLIDAYVDMRRVGSGRGQISA 141
KD + I + +D IA A+ H + + +D++ + R QI +
Sbjct: 90 KDKQKSMEFLSKIGNVINKDKIAVARLHTGEIEARLENKDKNGQIIDLKSI---RTQIDS 146
Query: 142 YPRQLESLIRLAEAHARVRLSSVVELIDVDEAARLHREALKQSATDPAS 190
+++SL+ + E HA S + L +V + A +REAL+ + A+
Sbjct: 147 TQHEVDSLVGVTEVHAPFYRVSSLYLREVGDFAGYYREALRYLGVEDAN 195
>U13876-16|AAW88394.1| 420|Caenorhabditis elegans Proteasome
regulatory particle,non-atpase-like protein 6, isoform b
protein.
Length = 420
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 89 DDEDA-IDISLMRDYIAFAKEHVQPTLSETAQQRLIDAYVDMRR 131
DD+D I + L+++ I +A E + L +T RL+ Y D++R
Sbjct: 96 DDQDGDIKVGLVKECIQWATEQNRTFLRQTLTARLVRLYNDLQR 139
>U13876-15|AAA21173.2| 438|Caenorhabditis elegans Proteasome
regulatory particle,non-atpase-like protein 6, isoform a
protein.
Length = 438
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 89 DDEDA-IDISLMRDYIAFAKEHVQPTLSETAQQRLIDAYVDMRR 131
DD+D I + L+++ I +A E + L +T RL+ Y D++R
Sbjct: 114 DDQDGDIKVGLVKECIQWATEQNRTFLRQTLTARLVRLYNDLQR 157
>U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform b protein.
Length = 1590
Score = 29.1 bits (62), Expect = 3.6
Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Query: 7 SIAKAGIICQLNARTSILAAANPAESQWNKNKTIVENVQLPHTLMSRFDLIFLVLDP--Q 64
S++ + + ++N+ TSI + ++PA+ N + T N P ++ L F + P +
Sbjct: 365 SVSSSISLSEVNSSTSIASESSPAKRSSNFDLT-ASNELPPPQMVELPKLSFFNMPPAVR 423
Query: 65 DEVFDRRLASHLVSLYYKDPNDPQDDEDAI 94
D + S L + PN D+DA+
Sbjct: 424 SAEDDSAMTSEEPILLLRSPNSATPDDDAL 453
>U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform a protein.
Length = 1604
Score = 29.1 bits (62), Expect = 3.6
Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Query: 7 SIAKAGIICQLNARTSILAAANPAESQWNKNKTIVENVQLPHTLMSRFDLIFLVLDP--Q 64
S++ + + ++N+ TSI + ++PA+ N + T N P ++ L F + P +
Sbjct: 379 SVSSSISLSEVNSSTSIASESSPAKRSSNFDLT-ASNELPPPQMVELPKLSFFNMPPAVR 437
Query: 65 DEVFDRRLASHLVSLYYKDPNDPQDDEDAI 94
D + S L + PN D+DA+
Sbjct: 438 SAEDDSAMTSEEPILLLRSPNSATPDDDAL 467
>Z82062-5|CAB54319.4| 582|Caenorhabditis elegans Hypothetical
protein W02A11.4 protein.
Length = 582
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/31 (45%), Positives = 17/31 (54%)
Query: 90 DEDAIDISLMRDYIAFAKEHVQPTLSETAQQ 120
D D IDIS + F KEHV + + TA Q
Sbjct: 44 DLDTIDISNLNRQFLFRKEHVSSSKAATATQ 74
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.319 0.133 0.373
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,714,956
Number of Sequences: 27539
Number of extensions: 208510
Number of successful extensions: 670
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 647
Number of HSP's gapped (non-prelim): 18
length of query: 276
length of database: 12,573,161
effective HSP length: 80
effective length of query: 196
effective length of database: 10,370,041
effective search space: 2032528036
effective search space used: 2032528036
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 59 (27.9 bits)
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