GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002763-TA|BGIBMGA002763-PA|IPR001208|MCM
         (276 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    23   3.9  
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    23   3.9  
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    23   3.9  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   9.1  

>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
          protein.
          Length = 130

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 11/27 (40%), Positives = 14/27 (51%)

Query: 10 KAGIICQLNARTSILAAANPAESQWNK 36
          K  IIC +     +L AA P ES  +K
Sbjct: 2  KVSIICLVLMAAIVLVAARPDESYTSK 28


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
          protein.
          Length = 130

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 11/27 (40%), Positives = 14/27 (51%)

Query: 10 KAGIICQLNARTSILAAANPAESQWNK 36
          K  IIC +     +L AA P ES  +K
Sbjct: 2  KVSIICLVLMAAIVLVAARPDESYTSK 28


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
          protein 3c precursor protein.
          Length = 130

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 11/27 (40%), Positives = 14/27 (51%)

Query: 10 KAGIICQLNARTSILAAANPAESQWNK 36
          K  IIC +     +L AA P ES  +K
Sbjct: 2  KVSIICLVLMAAIVLVAARPDESYTSK 28


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 10/35 (28%), Positives = 17/35 (48%)

Query: 87   PQDDEDAIDISLMRDYIAFAKEHVQPTLSETAQQR 121
            P D + A D  L+ D+ +   +  QP   +  QQ+
Sbjct: 1480 PTDKKSACDSKLIVDHSSQKTQQQQPQQQQQQQQQ 1514


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.319    0.133    0.373 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,783
Number of Sequences: 429
Number of extensions: 2308
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 5
Number of HSP's gapped (non-prelim): 5
length of query: 276
length of database: 140,377
effective HSP length: 57
effective length of query: 219
effective length of database: 115,924
effective search space: 25387356
effective search space used: 25387356
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 43 (21.4 bits)