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Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002762-TA|BGIBMGA002762-PA|undefined
         (177 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    31   0.005
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    31   0.007
AM295016-1|CAL25731.1|   96|Tribolium castaneum ecdysone recepto...    27   0.087
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    27   0.12 
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    26   0.15 
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    26   0.15 
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    26   0.15 
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    26   0.15 
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    26   0.15 
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           26   0.15 
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    26   0.15 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      25   0.35 
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      25   0.35 
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    24   0.62 
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    24   0.62 
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    24   0.81 
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    24   0.81 
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    23   1.4  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    23   1.9  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    23   1.9  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        22   3.3  
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    22   3.3  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   7.6  

>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 31.1 bits (67), Expect = 0.005
 Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 3/51 (5%)

Query: 7   RPSSRASSEASTPRRTRSSQQVIVPETPQRSTGTPSKDGTPSTPRAAPGPS 57
           RP S  S++ S P +T       VPE   +ST T  +  T ST  A P P+
Sbjct: 414 RPPSTPSADGSKPVQTTPKPGQWVPE---KSTSTTQRTTTVSTTEAPPAPA 461


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 30.7 bits (66), Expect = 0.007
 Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 7/92 (7%)

Query: 6   KRPSSRASSEASTPRRTRSSQQVIVPETPQRSTGTPSKDGTPSTPRAAPGPSRTPRTP-- 63
           ++ +  AS   ++P + ++S+    P    RS  TP+   TPST  + P  +    +P  
Sbjct: 188 QQQNKSASRTTTSPTKVKASKAS--PAAAPRSVATPTGIPTPSTSASPPTVNIKKESPQM 245

Query: 64  ---REAPGTSPARALASSPIGTDIDMSSPLNY 92
              R     +P  +  SS I T    +SPL Y
Sbjct: 246 QSYRPTGNITPHGSNTSSLITTPSPSASPLAY 277



 Score = 23.0 bits (47), Expect = 1.4
 Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 2/35 (5%)

Query: 69  TSPARALAS--SPIGTDIDMSSPLNYGTPSSLSTP 101
           TSP +  AS  SP      +++P    TPS+ ++P
Sbjct: 199 TSPTKVKASKASPAAAPRSVATPTGIPTPSTSASP 233


>AM295016-1|CAL25731.1|   96|Tribolium castaneum ecdysone receptor
          (isoform B) protein.
          Length = 96

 Score = 27.1 bits (57), Expect = 0.087
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)

Query: 51 RAAPGPSRTPRTPREAPGTSPARALASSPIGTDIDM 86
          R AP  S +  T   A   SPA +LAS+ IG D+D+
Sbjct: 8  RVAPEESSSEVTSSSALVMSPANSLASTDIG-DVDL 42


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 26.6 bits (56), Expect = 0.12
 Identities = 25/97 (25%), Positives = 40/97 (41%), Gaps = 4/97 (4%)

Query: 4   PSKRPSSRASSEASTPRRTRSSQQVIVPETPQ-RSTGTPSKDGT---PSTPRAAPGPSRT 59
           P+ R +SR SS++    R  S + ++       R   T S  G    P+ P AA      
Sbjct: 80  PNSRCNSRESSDSLVQPRCPSGESMLSERAALLRGVPTLSPVGVALPPTLPAAAAAALLP 139

Query: 60  PRTPREAPGTSPARALASSPIGTDIDMSSPLNYGTPS 96
           P+T   A   + A   A++     + M+SP  +   S
Sbjct: 140 PQTAAMAAYLNAAAVAAAAQQSHRLMMTSPSGFNRAS 176



 Score = 25.4 bits (53), Expect = 0.27
 Identities = 27/106 (25%), Positives = 41/106 (38%), Gaps = 9/106 (8%)

Query: 5   SKRPSSRASSEASTPRRTRSSQQVIVPETPQRSTGTPSKDGTPSTPRAAPGPSRTPRTPR 64
           S     +   +  T   T +S     P   + ++ TP    TPS+PR+    S  P   R
Sbjct: 21  SPEEGDKLEGDEDTGSMTPNSAASPAPPEEEAASPTPGDVPTPSSPRSI---SEDPLNCR 77

Query: 65  EAPGTSPARALASSPIGTDIDMSSPLNYGTPSSLSTPRSLMRGIMT 110
           + P  S   +  SS       +  P      S LS   +L+RG+ T
Sbjct: 78  DLP-NSRCNSRESSD-----SLVQPRCPSGESMLSERAALLRGVPT 117



 Score = 22.6 bits (46), Expect = 1.9
 Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 5/45 (11%)

Query: 11  RASSEAST-PRRTRSSQQVIVPETPQRSTGTPSKDGTPSTPRAAP 54
           R+ SE+S+   R  S  + + PE      G P      STPR+ P
Sbjct: 805 RSGSESSSISERCSSRVESLTPERKMEPPGVPLN----STPRSTP 845



 Score = 22.2 bits (45), Expect = 2.5
 Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 1/28 (3%)

Query: 56  PSRTPRTPREAPGTSPARALASSPIGTD 83
           P  +PR P E    SP R  ++SP  +D
Sbjct: 915 PLTSPRQPAETHAGSPCRN-SASPASSD 941


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 26.2 bits (55), Expect = 0.15
 Identities = 25/101 (24%), Positives = 39/101 (38%), Gaps = 4/101 (3%)

Query: 2   STPSKRPSSRASSEASTPRRTRSSQQVIVPETPQRST---GTPSKDGTPSTPRAAPGPSR 58
           +T +   +S   +++++     S Q +     P RST    TPS      +      P  
Sbjct: 90  NTQTHPSASCKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKSS-GLTSPLS 148

Query: 59  TPRTPREAPGTSPARALASSPIGTDIDMSSPLNYGTPSSLS 99
              +P   P TS A    SSP  +    SS    GT ++ S
Sbjct: 149 VSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNS 189


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 26.2 bits (55), Expect = 0.15
 Identities = 25/101 (24%), Positives = 39/101 (38%), Gaps = 4/101 (3%)

Query: 2   STPSKRPSSRASSEASTPRRTRSSQQVIVPETPQRST---GTPSKDGTPSTPRAAPGPSR 58
           +T +   +S   +++++     S Q +     P RST    TPS      +      P  
Sbjct: 90  NTQTHPSASCKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKSS-GLTSPLS 148

Query: 59  TPRTPREAPGTSPARALASSPIGTDIDMSSPLNYGTPSSLS 99
              +P   P TS A    SSP  +    SS    GT ++ S
Sbjct: 149 VSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNS 189


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 26.2 bits (55), Expect = 0.15
 Identities = 25/101 (24%), Positives = 39/101 (38%), Gaps = 4/101 (3%)

Query: 2   STPSKRPSSRASSEASTPRRTRSSQQVIVPETPQRST---GTPSKDGTPSTPRAAPGPSR 58
           +T +   +S   +++++     S Q +     P RST    TPS      +      P  
Sbjct: 90  NTQTHPSASCKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKSS-GLTSPLS 148

Query: 59  TPRTPREAPGTSPARALASSPIGTDIDMSSPLNYGTPSSLS 99
              +P   P TS A    SSP  +    SS    GT ++ S
Sbjct: 149 VSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNS 189


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 26.2 bits (55), Expect = 0.15
 Identities = 25/101 (24%), Positives = 39/101 (38%), Gaps = 4/101 (3%)

Query: 2   STPSKRPSSRASSEASTPRRTRSSQQVIVPETPQRST---GTPSKDGTPSTPRAAPGPSR 58
           +T +   +S   +++++     S Q +     P RST    TPS      +      P  
Sbjct: 90  NTQTHPSASCKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKSS-GLTSPLS 148

Query: 59  TPRTPREAPGTSPARALASSPIGTDIDMSSPLNYGTPSSLS 99
              +P   P TS A    SSP  +    SS    GT ++ S
Sbjct: 149 VSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNS 189


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 26.2 bits (55), Expect = 0.15
 Identities = 25/101 (24%), Positives = 39/101 (38%), Gaps = 4/101 (3%)

Query: 2   STPSKRPSSRASSEASTPRRTRSSQQVIVPETPQRST---GTPSKDGTPSTPRAAPGPSR 58
           +T +   +S   +++++     S Q +     P RST    TPS      +      P  
Sbjct: 46  NTQTHPSASCKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKSS-GLTSPLS 104

Query: 59  TPRTPREAPGTSPARALASSPIGTDIDMSSPLNYGTPSSLS 99
              +P   P TS A    SSP  +    SS    GT ++ S
Sbjct: 105 VSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNS 145


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 26.2 bits (55), Expect = 0.15
 Identities = 25/101 (24%), Positives = 39/101 (38%), Gaps = 4/101 (3%)

Query: 2   STPSKRPSSRASSEASTPRRTRSSQQVIVPETPQRST---GTPSKDGTPSTPRAAPGPSR 58
           +T +   +S   +++++     S Q +     P RST    TPS      +      P  
Sbjct: 90  NTQTHPSASCKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKSS-GLTSPLS 148

Query: 59  TPRTPREAPGTSPARALASSPIGTDIDMSSPLNYGTPSSLS 99
              +P   P TS A    SSP  +    SS    GT ++ S
Sbjct: 149 VSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNS 189


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 26.2 bits (55), Expect = 0.15
 Identities = 25/101 (24%), Positives = 39/101 (38%), Gaps = 4/101 (3%)

Query: 2   STPSKRPSSRASSEASTPRRTRSSQQVIVPETPQRST---GTPSKDGTPSTPRAAPGPSR 58
           +T +   +S   +++++     S Q +     P RST    TPS      +      P  
Sbjct: 90  NTQTHPSASCKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKSS-GLTSPLS 148

Query: 59  TPRTPREAPGTSPARALASSPIGTDIDMSSPLNYGTPSSLS 99
              +P   P TS A    SSP  +    SS    GT ++ S
Sbjct: 149 VSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNS 189


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 25.0 bits (52), Expect = 0.35
 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 7/53 (13%)

Query: 46  TPSTPRAAPGPSRTPRTPREA------PGTSPARALASSPIGTD-IDMSSPLN 91
           +PS   A+P   ++P TP EA      P   P      +P+GT+  D+++PL+
Sbjct: 710 SPSVSVASPYMLQSPLTPHEAFDVKLPPPPHPHHQPPRNPVGTNPHDINNPLS 762


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 25.0 bits (52), Expect = 0.35
 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 7/53 (13%)

Query: 46  TPSTPRAAPGPSRTPRTPREA------PGTSPARALASSPIGTD-IDMSSPLN 91
           +PS   A+P   ++P TP EA      P   P      +P+GT+  D+++PL+
Sbjct: 602 SPSVSVASPYMLQSPLTPHEAFDVKLPPPPHPHHQPPRNPVGTNPHDINNPLS 654


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 24.2 bits (50), Expect = 0.62
 Identities = 15/62 (24%), Positives = 29/62 (46%), Gaps = 2/62 (3%)

Query: 11  RASSEASTPRRTRSSQQVIVPETPQRSTGTPSKDGTPSTPR--AAPGPSRTPRTPREAPG 68
           R++   STP  + +++   +      ST  P K  T +T +  ++P  S +  +  E  G
Sbjct: 124 RSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTTSQNLSSPASSTSSTSSTEKAG 183

Query: 69  TS 70
           T+
Sbjct: 184 TN 185


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
          protein.
          Length = 351

 Score = 24.2 bits (50), Expect = 0.62
 Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 1/29 (3%)

Query: 31 PETPQRSTGTPSKDGTPSTPRAAPGPSRT 59
          P  PQ S  TP      ++P AAP P+ T
Sbjct: 12 PPAPQ-SAATPISSSGMTSPAAAPPPATT 39



 Score = 23.8 bits (49), Expect = 0.81
 Identities = 12/49 (24%), Positives = 21/49 (42%)

Query: 43 KDGTPSTPRAAPGPSRTPRTPREAPGTSPARALASSPIGTDIDMSSPLN 91
          ++  P  P++A  P  +      A    PA   + SP     + S+PL+
Sbjct: 8  EESPPPAPQSAATPISSSGMTSPAAAPPPATTSSGSPASVASNASAPLH 56


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 23.8 bits (49), Expect = 0.81
 Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 1/47 (2%)

Query: 49  TPRAAPGPSRTPRT-PREAPGTSPARALASSPIGTDIDMSSPLNYGT 94
           +P+ AP PS TP + P +   TS     + S + +   + +  +YG+
Sbjct: 70  SPQGAPSPSSTPSSLPTQRTSTSNPTYSSRSVMTSCSSVPTTASYGS 116



 Score = 23.4 bits (48), Expect = 1.1
 Identities = 13/42 (30%), Positives = 20/42 (47%)

Query: 3   TPSKRPSSRASSEASTPRRTRSSQQVIVPETPQRSTGTPSKD 44
           +PS  PSS  +   ST   T SS+ V+   +   +T +   D
Sbjct: 76  SPSSTPSSLPTQRTSTSNPTYSSRSVMTSCSSVPTTASYGSD 117



 Score = 21.0 bits (42), Expect = 5.7
 Identities = 11/30 (36%), Positives = 15/30 (50%), Gaps = 2/30 (6%)

Query: 123 IAPNVPAPTPTRRYWHKQRSQNLCPQVKAA 152
           + P VP+P   RRY    R+   CP  + A
Sbjct: 272 LPPQVPSPRSQRRY--TGRATCDCPNCQEA 299


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 23.8 bits (49), Expect = 0.81
 Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 5/80 (6%)

Query: 48  STPRAAPGPSRTPRTPREAPGT--SP---ARALASSPIGTDIDMSSPLNYGTPSSLSTPR 102
           +TP +APGP+ +  +  + P T  SP     +L SSP       + P    +P+ +  P 
Sbjct: 294 ATPYSAPGPTYSTWSTVQTPTTVMSPTINCWSLTSSPPPPYQISAQPTPSQSPNQIYQPV 353

Query: 103 SLMRGIMTPARQRADLRGHH 122
           + +  +  P+    D+   H
Sbjct: 354 TNLTNLTYPSYYNQDVSCTH 373


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 11/41 (26%), Positives = 19/41 (46%)

Query: 10  SRASSEASTPRRTRSSQQVIVPETPQRSTGTPSKDGTPSTP 50
           ++AS + +    T+  Q    PE+   S G  +K+G    P
Sbjct: 412 TQASEQPTESSTTQKPQTTKTPESGNESDGVCTKEGIVRDP 452


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
          transcriptase andRNase H protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 1/42 (2%)

Query: 13 SSEASTPRRTRSSQQVIVPETPQRSTGTPSKDG-TPSTPRAA 53
          S +   P+    +QQ+   E  +RST + S +G   + PRA+
Sbjct: 22 SGQQHGPQSDSRNQQLRTGEKRKRSTSSQSTEGENDARPRAS 63


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 2/48 (4%)

Query: 1   MSTPSKR--PSSRASSEASTPRRTRSSQQVIVPETPQRSTGTPSKDGT 46
           ++ P KR  PS + SS     + + S      P  P     TPSKD +
Sbjct: 69  VALPPKREIPSPKRSSPILAEKVSVSPTTPPTPSPPPEERLTPSKDAS 116


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 10/27 (37%), Positives = 13/27 (48%)

Query: 37  STGTPSKDGTPSTPRAAPGPSRTPRTP 63
           +T TP+   T   P   PG S +P  P
Sbjct: 311 ATPTPTSVMTELYPSPVPGHSTSPNLP 337


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)

Query: 41  PSKDGTPSTPRAAPGPSRTPRTPREAPGTSPARA 74
           P++  +P  P   P P RT  T   A   SP+++
Sbjct: 189 PTQGASP-LPLLVPIPQRTASTASSASNYSPSQS 221


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 6/11 (54%), Positives = 8/11 (72%)

Query: 137 WHKQRSQNLCP 147
           W ++R Q LCP
Sbjct: 720 WERKRRQYLCP 730


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.311    0.125    0.367 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,838
Number of Sequences: 317
Number of extensions: 2338
Number of successful extensions: 38
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of query: 177
length of database: 114,650
effective HSP length: 53
effective length of query: 124
effective length of database: 97,849
effective search space: 12133276
effective search space used: 12133276
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.4 bits)
S2: 41 (20.6 bits)

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