GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002762-TA|BGIBMGA002762-PA|undefined
         (177 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             28   0.045
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    28   0.059
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   3.9  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   5.2  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   6.8  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    21   9.0  
AB264333-1|BAF44088.1|   36|Apis mellifera ecdysone-induced prot...    21   9.0  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 28.3 bits (60), Expect = 0.045
 Identities = 16/59 (27%), Positives = 28/59 (47%)

Query: 34  PQRSTGTPSKDGTPSTPRAAPGPSRTPRTPREAPGTSPARALASSPIGTDIDMSSPLNY 92
           P  + G  SK+G P++   A G +    +P      SPA +  SSP  + +  +  +N+
Sbjct: 889 PASTPGCSSKNGEPTSAAFAQGFATAASSPGLLERASPAFSGTSSPTNSLVGKTVAVNF 947


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 27.9 bits (59), Expect = 0.059
 Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 4/86 (4%)

Query: 24  SSQQVIVPETPQRSTGTPSKDGTPSTPRAAPGPSRTPRTPREA--PGTSPARALASSPIG 81
           +S  ++  ETP+   GT +      TP + P  S    T   A  PG + A   A+    
Sbjct: 28  ASLTLVKAETPEHLAGTSTTAAATPTPPSVPVGSAVAGTAGGALFPGMAAAGKGAARSDD 87

Query: 82  TDIDMSSPLNYGTPSSLSTPRSLMRG 107
              + +SP+  G+PS+   P+ ++ G
Sbjct: 88  WLANANSPV--GSPSAALQPQHVVYG 111


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 2/49 (4%)

Query: 51  RAAPGPSRTPRTPREAPGTSPARALASSPIGTDIDMSSP-LNYGTPSSL 98
           R  PG  R  + P++ P T P  A  +  +   +D S+  L++  P  L
Sbjct: 297 RCDPGYFRAEKDPKKMPCTQPPSAPQNLTVNF-VDQSTVFLSWNAPHML 344


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 10/32 (31%), Positives = 17/32 (53%)

Query: 21  RTRSSQQVIVPETPQRSTGTPSKDGTPSTPRA 52
           R+ S++ + + E PQ  T +  K  +  TP A
Sbjct: 601 RSSSTKGITIQEPPQWHTRSTEKRVSAGTPAA 632


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 13/46 (28%), Positives = 17/46 (36%)

Query: 63  PREAPGTSPARALASSPIGTDIDMSSPLNYGTPSSLSTPRSLMRGI 108
           P E P       L  S  G++    S   YG P  L  P+    G+
Sbjct: 567 PDEVPSDVLYNRLVVSEDGSETFKYSSQPYGFPERLLLPKGKKEGM 612


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 20.6 bits (41), Expect = 9.0
 Identities = 8/27 (29%), Positives = 16/27 (59%)

Query: 135 RYWHKQRSQNLCPQVKAAGSMMVDKQI 161
           ++  KQR++ L  + KAA    ++K +
Sbjct: 410 KFRQKQRAEILAKEHKAAADQKLEKHL 436


>AB264333-1|BAF44088.1|   36|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 36

 Score = 20.6 bits (41), Expect = 9.0
 Identities = 6/13 (46%), Positives = 9/13 (69%)

Query: 121 HHIAPNVPAPTPT 133
           HH++PN+P    T
Sbjct: 12  HHLSPNMPTMDST 24


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.311    0.125    0.367 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,225
Number of Sequences: 429
Number of extensions: 3092
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of query: 177
length of database: 140,377
effective HSP length: 54
effective length of query: 123
effective length of database: 117,211
effective search space: 14416953
effective search space used: 14416953
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.4 bits)
S2: 41 (20.6 bits)