Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002761-TA|BGIBMGA002761-PA|IPR012858|DC-STAMP-like
         (451 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.           24   3.0  
AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.           24   3.0  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    23   4.0  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          23   5.2  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    22   9.2  

>AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 23.8 bits (49), Expect = 3.0
 Identities = 11/47 (23%), Positives = 21/47 (44%)

Query: 275 ITGYFKMIDERRRISNKMHLLPLKKMERRKYIDIHSAALMTERSKLV 321
           +T +FK   E +R        PL ++   K    H A ++T  + ++
Sbjct: 51  MTAFFKKYPEYQRYFTAFMDTPLNELPANKRFQAHCAGVITALNNVI 97


>AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 23.8 bits (49), Expect = 3.0
 Identities = 11/47 (23%), Positives = 21/47 (44%)

Query: 275 ITGYFKMIDERRRISNKMHLLPLKKMERRKYIDIHSAALMTERSKLV 321
           +T +FK   E +R        PL ++   K    H A ++T  + ++
Sbjct: 51  MTAFFKKYPEYQRYFTAFMDTPLNELPANKRFQAHCAGVITALNNVI 97


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 23.4 bits (48), Expect = 4.0
 Identities = 13/30 (43%), Positives = 17/30 (56%)

Query: 341 DRMFYEALDMVRRYADLEPRQGLRDLEIKV 370
           DR+   ALDMV    DL+ R     L+I+V
Sbjct: 490 DRVCDMALDMVEAITDLKDRSTGLHLQIRV 519



 Score = 22.2 bits (45), Expect = 9.2
 Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 4/41 (9%)

Query: 285 RRRISNKMHLLPLKKMERRKYIDIHSAALMTERSKLVTQVL 325
           RR ++N     P K  + R+Y      A+MT  S++ + +L
Sbjct: 685 RRSVANS----PTKNADSREYRSNSMGAVMTRNSEMFSSLL 721


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 23.0 bits (47), Expect = 5.2
 Identities = 8/18 (44%), Positives = 12/18 (66%)

Query: 174 VNKGLGIGYETMKLIEYE 191
           +N G+  GYE  KL+ Y+
Sbjct: 466 INLGIECGYEIKKLLRYK 483


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 22.2 bits (45), Expect = 9.2
 Identities = 13/57 (22%), Positives = 28/57 (49%), Gaps = 1/57 (1%)

Query: 76  NAKEVVRVFGCSNELAYNLSTYKYTLLMNVIRKTALDMNIEVDRVKDSFRYFKVVAR 132
           NA+ VV      N   ++   Y   L ++++ +TA+ ++ +  R  ++F Y   V +
Sbjct: 160 NARSVVEKMRKENGKEFDCHNYMSELTVDILLETAMGVS-KPTRDHNAFEYAMAVMK 215


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.324    0.137    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,381
Number of Sequences: 429
Number of extensions: 4109
Number of successful extensions: 15
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 10
Number of HSP's gapped (non-prelim): 6
length of query: 451
length of database: 140,377
effective HSP length: 60
effective length of query: 391
effective length of database: 114,637
effective search space: 44823067
effective search space used: 44823067
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 45 (22.2 bits)