GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002761-TA|BGIBMGA002761-PA|IPR012858|DC-STAMP-like
         (451 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    24   2.5  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    24   2.5  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        22   7.7  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.8 bits (49), Expect = 2.5
 Identities = 12/21 (57%), Positives = 13/21 (61%)

Query: 301 ERRKYIDIHSAALMTERSKLV 321
           E  K    H AAL+TERS LV
Sbjct: 129 EEEKSSTKHYAALLTERSSLV 149


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 23.8 bits (49), Expect = 2.5
 Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 280 KMIDERRRISN-KMHLLPLKKMERRKYIDIHSAALMTERSKLVT 322
           K+ D  R +   K  +  LK+   R Y  IH  ++  ER + +T
Sbjct: 290 KLRDLNREVDQIKQDVEDLKRWSDRIYAAIHQGSVTDERGRSIT 333


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 22.2 bits (45), Expect = 7.7
 Identities = 9/23 (39%), Positives = 15/23 (65%)

Query: 298 KKMERRKYIDIHSAALMTERSKL 320
           K  ER +Y DI++   + +R+KL
Sbjct: 237 KAFERTQYPDIYTREELAQRTKL 259


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.324    0.137    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,718
Number of Sequences: 317
Number of extensions: 3112
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1
Number of HSP's gapped (non-prelim): 3
length of query: 451
length of database: 114,650
effective HSP length: 59
effective length of query: 392
effective length of database: 95,947
effective search space: 37611224
effective search space used: 37611224
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 45 (22.2 bits)