GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002761-TA|BGIBMGA002761-PA|IPR012858|DC-STAMP-like
         (451 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-2250|AAF49838.2|  714|Drosophila melanogaster CG11281-P...   107   4e-23
BT030434-1|ABO52854.1|  492|Drosophila melanogaster IP18315p pro...    52   2e-06
AE014296-13|AAF47333.2|  480|Drosophila melanogaster CG6845-PA, ...    38   0.037
BT003264-1|AAO25021.1|  334|Drosophila melanogaster LD22345p pro...    36   0.11 
AY051619-1|AAK93043.1|  334|Drosophila melanogaster GH26634p pro...    36   0.11 
AE014296-14|AAS64919.1|  334|Drosophila melanogaster CG6845-PB, ...    36   0.11 
AE014296-247|AAN11477.1|  469|Drosophila melanogaster CG32320-PA...    34   0.46 

>AE014296-2250|AAF49838.2|  714|Drosophila melanogaster CG11281-PA
           protein.
          Length = 714

 Score =  107 bits (256), Expect = 4e-23
 Identities = 56/207 (27%), Positives = 107/207 (51%), Gaps = 3/207 (1%)

Query: 214 IKDARKTNEDIGISFEEKTSIMRLVVTMMNVCXXXXXXXXXXXXVTYHDLYLTNINHDNV 273
           +K A +T +     FE +  I   V+ ++               + Y+  YL ++  DN 
Sbjct: 349 LKSAERTGQAFKEDFERQKRIFNKVMGILQKILCLFMLRMVYVSINYYVKYLNDVEFDNF 408

Query: 274 YITGYFKMIDERRRISNKMHLLPLKKMERRKYIDIHSAALMT--ERSKLVTQVLKLALEM 331
           YIT YFK +D+RR+      +LPL+  E+ KYID+      T  E + +   +L+  LE+
Sbjct: 409 YITKYFKHVDQRRKEQRIDAILPLRTYEKSKYIDVDHIFSRTHHESTTVCFNLLQFLLEL 468

Query: 332 ITATTFVMMDRMFYEALDMVRRYADLEPRQ-GLRDLEIKVDGVGPISAILRKFFESFDVS 390
           +TA  F+++D +  E L +VR+ + +  +Q G  ++   + GVG ++ +LR    +F++ 
Sbjct: 469 VTAGLFILIDHLVVELLQIVRKRSKIVYQQDGEHEVRFNISGVGQMARLLRTTMHNFNIH 528

Query: 391 PISSFTVVTKECVPQPCAMPAQYFFKI 417
              S ++  KEC+P    +P + ++++
Sbjct: 529 EKVSTSLSNKECLPNAHVLPKKMYYQL 555



 Score = 48.8 bits (111), Expect = 2e-05
 Identities = 23/59 (38%), Positives = 34/59 (57%)

Query: 66  LSGPITNMGLNAKEVVRVFGCSNELAYNLSTYKYTLLMNVIRKTALDMNIEVDRVKDSF 124
           +SGPI N+  NA EV RVF C+  L YNLS  ++ L+      T   M  +V+ ++ +F
Sbjct: 115 ISGPIANLVENAGEVARVFVCTTVLTYNLSKTRFDLMAKPFTNTLKHMRGDVEEIRHTF 173


>BT030434-1|ABO52854.1|  492|Drosophila melanogaster IP18315p
           protein.
          Length = 492

 Score = 51.6 bits (118), Expect = 2e-06
 Identities = 41/187 (21%), Positives = 80/187 (42%), Gaps = 5/187 (2%)

Query: 222 EDIGISFEEKTSIMRLVVTMMNVCXXXXXXXXXXXXVTYHDLYLTNINHDNVYITGYFKM 281
           +D+   FE +   +  V   +N+             + +   YLT+ + +N YIT  F+ 
Sbjct: 107 QDVKEEFEAQRHKLHFVYLWLNLIIFILLLTIIYKSLCFWFRYLTDNDFENFYITEAFED 166

Query: 282 IDERRRISNKMHLLPLKKMERRKYIDIHSAALMT-ERSKLVTQVLKLALEMITATTFVMM 340
            D++      + +LPL   E  K++ I S  L+  E   +    + L +  I       +
Sbjct: 167 YDDQYYQIMGLRVLPLSNCEDNKFVKISSMRLLAKEFDTIYRSAMFLVITGIQLLCICFV 226

Query: 341 DRMFYEALDMVRRYAD-LEPRQGLRDLEIKVDGVGPISAILRKFFESFDVSPISSFTVVT 399
           D   Y  L ++  +   +E  +     +I ++G G I  +LR   ++F+     +F + T
Sbjct: 227 DYSLYSLLTLMSYHGHMIEDVKPPSYTKIVINGGGKIGDMLRDLVQAFEP---RTFKMNT 283

Query: 400 KECVPQP 406
           + C+P P
Sbjct: 284 QRCLPIP 290


>AE014296-13|AAF47333.2|  480|Drosophila melanogaster CG6845-PA,
           isoform A protein.
          Length = 480

 Score = 37.5 bits (83), Expect = 0.037
 Identities = 36/148 (24%), Positives = 63/148 (42%), Gaps = 9/148 (6%)

Query: 264 YLTNINHDNVYITGYFKMIDERRRISNKMHLLPLKKMERRKYIDIHSAAL-MTERSKLVT 322
           Y+ +    NV++T     ID R        LLPL ++ER KY+ + S  L + E   +V 
Sbjct: 146 YMHSRQFQNVFLTKILSDIDRRHEKHGYDPLLPLHQLERAKYMKLTSLRLTLFEFVSIVE 205

Query: 323 QVLKLALEMITATTFVMMDRMFYEALDMVRRYADLEPR---QGLRDLEIKVDGVGPISAI 379
               +A   +       +D   +  L  +  +   E         DLEIK  G G ++ +
Sbjct: 206 NACFMATTCLQLFAICFLDYGLFWLLATISLHGHQETGLEVPAYVDLEIK--GGGFVADV 263

Query: 380 LRKFFESFDVSPISSFTVV-TKECVPQP 406
           +R    +F   P++  +++    C+P P
Sbjct: 264 MRGIANAF--RPLTQKSILDVNPCLPLP 289


>BT003264-1|AAO25021.1|  334|Drosophila melanogaster LD22345p
           protein.
          Length = 334

 Score = 35.9 bits (79), Expect = 0.11
 Identities = 35/140 (25%), Positives = 60/140 (42%), Gaps = 9/140 (6%)

Query: 272 NVYITGYFKMIDERRRISNKMHLLPLKKMERRKYIDIHSAAL-MTERSKLVTQVLKLALE 330
           NV++T     ID R        LLPL ++ER KY+ + S  L + E   +V     +A  
Sbjct: 8   NVFLTKILSDIDRRHEKHGYDPLLPLHQLERAKYMKLTSLRLTLFEFVSIVENACFMATT 67

Query: 331 MITATTFVMMDRMFYEALDMVRRYADLEPR---QGLRDLEIKVDGVGPISAILRKFFESF 387
            +       +D   +  L  +  +   E         DLEIK  G G ++ ++R    +F
Sbjct: 68  CLQLFAICFLDYGLFWLLATISLHGHQETGLEVPAYVDLEIK--GGGFVADVMRGIANAF 125

Query: 388 DVSPISSFTVV-TKECVPQP 406
              P++  +++    C+P P
Sbjct: 126 --RPLTQKSILDVNPCLPLP 143


>AY051619-1|AAK93043.1|  334|Drosophila melanogaster GH26634p
           protein.
          Length = 334

 Score = 35.9 bits (79), Expect = 0.11
 Identities = 35/140 (25%), Positives = 60/140 (42%), Gaps = 9/140 (6%)

Query: 272 NVYITGYFKMIDERRRISNKMHLLPLKKMERRKYIDIHSAAL-MTERSKLVTQVLKLALE 330
           NV++T     ID R        LLPL ++ER KY+ + S  L + E   +V     +A  
Sbjct: 8   NVFLTKILSDIDRRHEKHGYDPLLPLHQLERAKYMKLTSLRLTLFEFVSIVENACFMATT 67

Query: 331 MITATTFVMMDRMFYEALDMVRRYADLEPR---QGLRDLEIKVDGVGPISAILRKFFESF 387
            +       +D   +  L  +  +   E         DLEIK  G G ++ ++R    +F
Sbjct: 68  CLQLFAICFLDYGLFWLLATISLHGHQETGLEVPAYVDLEIK--GGGFVADVMRGIANAF 125

Query: 388 DVSPISSFTVV-TKECVPQP 406
              P++  +++    C+P P
Sbjct: 126 --RPLTQKSILDVNPCLPLP 143


>AE014296-14|AAS64919.1|  334|Drosophila melanogaster CG6845-PB,
           isoform B protein.
          Length = 334

 Score = 35.9 bits (79), Expect = 0.11
 Identities = 35/140 (25%), Positives = 60/140 (42%), Gaps = 9/140 (6%)

Query: 272 NVYITGYFKMIDERRRISNKMHLLPLKKMERRKYIDIHSAAL-MTERSKLVTQVLKLALE 330
           NV++T     ID R        LLPL ++ER KY+ + S  L + E   +V     +A  
Sbjct: 8   NVFLTKILSDIDRRHEKHGYDPLLPLHQLERAKYMKLTSLRLTLFEFVSIVENACFMATT 67

Query: 331 MITATTFVMMDRMFYEALDMVRRYADLEPR---QGLRDLEIKVDGVGPISAILRKFFESF 387
            +       +D   +  L  +  +   E         DLEIK  G G ++ ++R    +F
Sbjct: 68  CLQLFAICFLDYGLFWLLATISLHGHQETGLEVPAYVDLEIK--GGGFVADVMRGIANAF 125

Query: 388 DVSPISSFTVV-TKECVPQP 406
              P++  +++    C+P P
Sbjct: 126 --RPLTQKSILDVNPCLPLP 143


>AE014296-247|AAN11477.1|  469|Drosophila melanogaster CG32320-PA
           protein.
          Length = 469

 Score = 33.9 bits (74), Expect = 0.46
 Identities = 19/87 (21%), Positives = 38/87 (43%)

Query: 222 EDIGISFEEKTSIMRLVVTMMNVCXXXXXXXXXXXXVTYHDLYLTNINHDNVYITGYFKM 281
           +D+   FE +   +  V   +N+             + +   YLT+ + +N YIT  F+ 
Sbjct: 181 QDVKEEFEAQRHKLHFVYLWLNLIIFILLLTIIYKSLCFWFRYLTDNDFENFYITEAFED 240

Query: 282 IDERRRISNKMHLLPLKKMERRKYIDI 308
            D++      + +LPL   E  K++ +
Sbjct: 241 YDDQYYQIMGLRVLPLSNCEDNKFVKV 267


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.324    0.137    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,115,993
Number of Sequences: 52641
Number of extensions: 596026
Number of successful extensions: 1791
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1781
Number of HSP's gapped (non-prelim): 8
length of query: 451
length of database: 24,830,863
effective HSP length: 87
effective length of query: 364
effective length of database: 20,251,096
effective search space: 7371398944
effective search space used: 7371398944
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 63 (29.5 bits)