Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002759-TA|BGIBMGA002759-PA|IPR001394|Peptidase C19,
ubiquitin carboxyl-terminal hydrolase 2, IPR000626|Ubiquitin
(408 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC6G9.08 |ubp6||ubiquitin C-terminal hydrolase Ubp6|Schizosacc... 224 2e-59
SPCC1682.12c |ubp16||ubiquitin C-terminal hydrolase Ubp16|Schizo... 63 6e-11
SPAC328.06 |ubp2||ubiquitin C-terminal hydrolase Ubp2|Schizosacc... 44 4e-05
SPBC1703.12 |ubp9||ubiquitin C-terminal hydrolase Ubp9|Schizosac... 43 9e-05
SPCC1494.05c |ubp12||ubiquitin C-terminal hydrolase Ubp12|Schizo... 41 3e-04
SPBC18H10.08c |ubp4||ubiquitin C-terminal hydrolase Ubp4|Schizos... 40 8e-04
SPCC16A11.12c |ubp1||ubiquitin C-terminal hydrolase Ubp1|Schizos... 37 0.004
SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyc... 32 0.17
SPBP8B7.21 |ubp3||ubiquitin C-terminal hydrolase Ubp3|Schizosacc... 31 0.29
SPBC6B1.06c |ubp14|ucp2|ubiquitin C-terminal hydrolase Ubp14|Sch... 31 0.29
SPBC3E7.05c |||conserved eukaryotic protein|Schizosaccharomyces ... 31 0.39
SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory sub... 30 0.68
SPCC188.08c |ubp22|ubp5|ubiquitin C-terminal hydrolase Ubp22|Sch... 30 0.68
SPAC23G3.08c |ubp7||ubiquitin C-terminal hydrolase Ubp7|Schizosa... 29 1.2
SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces pomb... 28 2.1
SPAC6F12.16c |mtr4||ATP-dependent RNA helicase, TRAMP complex su... 27 3.6
SPAC23C4.18c |rad4|cut5, dre3|BRCT domain protein Rad4|Schizosac... 27 3.6
SPBC19C2.04c |ubp11||ubiquitin C-terminal hydrolase Ubp11|Schizo... 27 3.6
SPAC13A11.04c |ubp8||ubiquitin C-terminal hydrolase Ubp8|Schizos... 27 4.8
SPBC14C8.03 |fma2||methionine aminopeptidase Fma2 |Schizosacchar... 27 4.8
SPAC6C3.07 |mug68||sequence orphan|Schizosaccharomyces pombe|chr... 27 4.8
SPBC713.02c |ubp21|ubpD, ubp15|ubiquitin C-terminal hydrolase Ub... 27 6.3
SPAC1782.08c |rex3||exonuclease Rex3 |Schizosaccharomyces pombe|... 26 8.4
>SPAC6G9.08 |ubp6||ubiquitin C-terminal hydrolase
Ubp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 467
Score = 224 bits (548), Expect = 2e-59
Identities = 131/359 (36%), Positives = 191/359 (53%), Gaps = 22/359 (6%)
Query: 4 VSVKVKWGKEMYPDVEVNTDDEPVLFKAQIFALTGVQPERQKVVCKGVTLRDDTW-GNFK 62
+ + ++W + Y D+E+ ++ K Q+++LT V PERQKV+ KG L+DD G+
Sbjct: 2 IPIAIRWQGKKY-DLEIEPNETGSTLKHQLYSLTQVPPERQKVIVKGGQLKDDVLLGSVG 60
Query: 63 LTNNALVLVMGSKEEDVPAAPVEQTRFVEDMNEAELATAMDMPEGLINLGNTCYMNATVQ 122
+ NA +L+MG+ E A P+ VE E + P GLINLGNTCYMN+TVQ
Sbjct: 61 IKPNATLLMMGTAGELPTAMPIPAVESVEQ----EESEDDGYPSGLINLGNTCYMNSTVQ 116
Query: 123 CLKTVPELRNALLNYDKSGELTAALSETVSALDXXXXXXXXXXXXXXXXXXXXXXXXXXX 182
L+ +PEL +A+ ++ SG L A E + L+
Sbjct: 117 MLRAIPELSDAVSQFNSSGGLVA---EYRTLLNSMQSNAPVTPMRFLQSLRMEYPQFAEM 173
Query: 183 XXXXXXXXQQDASECWTEIVRALQQRLPAAPMPDKNATRASVIEQYFGGTLDVELVC--S 240
QQDA ECW+ ++ LQ+ L + +++ G L + C +
Sbjct: 174 SRETGGYAQQDAEECWSFLLSVLQRSLSS-----------EWVQKNMAGKLLSTMKCDEN 222
Query: 241 EADEPPTHSEESFLQLSCFISQDVKYLQSGLRSKMAEHITKMSQTLGRDAVYTKTSKISR 300
E E P+ S ++FL L C IS Y+ G+ + + I+K S L RDA+Y+K S+ISR
Sbjct: 223 EVQEQPSISHDTFLSLPCHISMHTSYMTQGILEGLTQKISKHSDVLNRDAMYSKISRISR 282
Query: 301 LPAYLTVQFVRFYYKEKESINAKILKDVKFPLDLDVYELCTPELQERLTPMRNKFKELE 359
LP YLTV FVRFY+K AKIL+ VKFP +LD E CTPEL ++L P+R+K +E+E
Sbjct: 283 LPNYLTVNFVRFYWKASIGKKAKILRKVKFPFELDAVEFCTPELSQKLIPVRDKLREIE 341
>SPCC1682.12c |ubp16||ubiquitin C-terminal hydrolase
Ubp16|Schizosaccharomyces pombe|chr 3|||Manual
Length = 457
Score = 63.3 bits (147), Expect = 6e-11
Identities = 65/264 (24%), Positives = 107/264 (40%), Gaps = 13/264 (4%)
Query: 76 EEDVPAAPVEQTRFVEDMNEAELATAMDMPEGLINLGNTCYMNATVQCLKTVPELRNALL 135
+ED P + F E+ E M GL+NLGNTC+MN+ +Q + P L LL
Sbjct: 95 DEDPAFIPPARILFPEEKLSMEWDNIMPNAPGLVNLGNTCFMNSVLQLMTQTPPLVQYLL 154
Query: 136 N--YDKSGELTAALSETVSALDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQD 193
+ + S + A + + Q+D
Sbjct: 155 SGQHSLSCRMNACVLCRMEQHVARAYPNKGTKRASAFKPSGIQSMLKVISSHFRPYRQED 214
Query: 194 ASECWTEIVRALQQR-LPAAPMPDKNATRASVIEQYFGGTLDVELVCSEADEPPTHSEES 252
A E +V A Q+ L D + SV+ + FGG L +++CS + P+++ ++
Sbjct: 215 AHEFMRYLVDAWQKSCLQNHKNLDHPSRETSVVHRIFGGYLRQQILCSVC-KKPSNTYQA 273
Query: 253 FLQLSCFISQDVKYLQSGLRSKM-AEHITKMSQTLGRDAVY----TKTSKISRLPAYLTV 307
L LS + L L+ + AE +TK ++ + +K I R P LT+
Sbjct: 274 LLDLS--VDAKGSSLADSLKHFVHAEKLTKQNKYRCENCKQLVDASKQMTIYRAPNILTI 331
Query: 308 QFVRFYYKEKESINAKILKDVKFP 331
F RF + +S +KI K + +P
Sbjct: 332 HFKRFTFNGFQS--SKISKQISYP 353
>SPAC328.06 |ubp2||ubiquitin C-terminal hydrolase
Ubp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1141
Score = 44.0 bits (99), Expect = 4e-05
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 100 TAMDMPEGLINLGNTCYMNATVQCLKTVPELRNALLNYDKSGEL 143
+++D P GL N GN CY+N+ +Q + LRNA+L+ D++ +L
Sbjct: 608 SSLDTPIGLENTGNLCYLNSLIQYYFIIKPLRNAILDIDENKDL 651
>SPBC1703.12 |ubp9||ubiquitin C-terminal hydrolase
Ubp9|Schizosaccharomyces pombe|chr 2|||Manual
Length = 585
Score = 42.7 bits (96), Expect = 9e-05
Identities = 39/152 (25%), Positives = 62/152 (40%), Gaps = 7/152 (4%)
Query: 191 QQDASECWTEIVRALQQRLPAAPMPDKNATRASVIEQYFGGTLDVELVCSEADEPPTHSE 250
QQDA E + ++ ++ + L + + F GTL E C E T +
Sbjct: 196 QQDAHEFFNFLLNSVTETLDEYYGNHSDVMHPKWVHSLFEGTLTSETKCLTC-ENITSRD 254
Query: 251 ESFLQLSCFISQDVKYLQSGLRSKMAEHITKMSQTLGRDAVYT-----KTSKISRLPAYL 305
ESFL LS I + S LRS A + D + K KI +LP L
Sbjct: 255 ESFLDLSIDIENHTS-VTSCLRSFSASEMLSSKNKFHCDVCKSLQEAEKRMKIKKLPKIL 313
Query: 306 TVQFVRFYYKEKESINAKILKDVKFPLDLDVY 337
++ RF Y E + + K+ + F ++ ++
Sbjct: 314 SLHLKRFKYNETQEGHDKLFYTIVFTNEMRLF 345
Score = 30.3 bits (65), Expect = 0.51
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 100 TAMDMPEGLINLGNTCYMNATVQCLKTVPELRNALLNY 137
T D GL N GNTCY+++ + L + R++L +Y
Sbjct: 35 TLTDRFYGLTNYGNTCYVSSVLVSLYHLKPFRDSLNSY 72
>SPCC1494.05c |ubp12||ubiquitin C-terminal hydrolase
Ubp12|Schizosaccharomyces pombe|chr 3|||Manual
Length = 979
Score = 41.1 bits (92), Expect = 3e-04
Identities = 17/26 (65%), Positives = 20/26 (76%)
Query: 107 GLINLGNTCYMNATVQCLKTVPELRN 132
GL NLGNTCYMN+ +QCL ELR+
Sbjct: 312 GLSNLGNTCYMNSALQCLTHTRELRD 337
>SPBC18H10.08c |ubp4||ubiquitin C-terminal hydrolase
Ubp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 438
Score = 39.5 bits (88), Expect = 8e-04
Identities = 17/31 (54%), Positives = 20/31 (64%)
Query: 105 PEGLINLGNTCYMNATVQCLKTVPELRNALL 135
P GL NLGNTCYMN +QCL +L +L
Sbjct: 71 PIGLTNLGNTCYMNCVLQCLFACKDLTIPML 101
>SPCC16A11.12c |ubp1||ubiquitin C-terminal hydrolase
Ubp1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 849
Score = 37.1 bits (82), Expect = 0.004
Identities = 17/35 (48%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Query: 107 GLINLGNTCYMNATVQCLKTVPELRNALL--NYDK 139
GL NLGN+CYMN+ +QC+ EL L +Y+K
Sbjct: 280 GLYNLGNSCYMNSALQCMIHTHELTKYFLSDSYEK 314
>SPAC26A3.16 |dph1|ucp5|UBA domain protein
Dph1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 354
Score = 31.9 bits (69), Expect = 0.17
Identities = 14/56 (25%), Positives = 30/56 (53%)
Query: 1 MPNVSVKVKWGKEMYPDVEVNTDDEPVLFKAQIFALTGVQPERQKVVCKGVTLRDD 56
M N+S+ +K + V V+++ + K I + ++ ERQ+++ G L+D+
Sbjct: 1 MTNISLTIKAANDQKYAVTVDSESSVLALKEAIAPVADIEKERQRLIYAGRVLKDE 56
>SPBP8B7.21 |ubp3||ubiquitin C-terminal hydrolase
Ubp3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 512
Score = 31.1 bits (67), Expect = 0.29
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 105 PEGLINLGNTCYMNATVQCLKTVPELRNALLNYDK----SGELTAALSETVSAL 154
P G IN GN C+MN+ +Q L N L ++ + E T L E+++ L
Sbjct: 132 PRGFINTGNICFMNSILQALMYCVPFYNLLKQINRMVPYNFERTTPLIESLTML 185
>SPBC6B1.06c |ubp14|ucp2|ubiquitin C-terminal hydrolase
Ubp14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 31.1 bits (67), Expect = 0.29
Identities = 14/30 (46%), Positives = 20/30 (66%)
Query: 107 GLINLGNTCYMNATVQCLKTVPELRNALLN 136
GL NLGN+CY+ +T+Q L ++ E LN
Sbjct: 301 GLKNLGNSCYLASTMQSLFSIKEFAIHELN 330
>SPBC3E7.05c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 550
Score = 30.7 bits (66), Expect = 0.39
Identities = 27/137 (19%), Positives = 56/137 (40%), Gaps = 2/137 (1%)
Query: 250 EESFLQLSCFISQDVKYLQSGLRSKM-AEHITKMSQTLGRDAVYTKTSKISRLPAYLTVQ 308
E+S++ +K S + K + +I+K + D K P L V+
Sbjct: 110 EQSWIGYKYLGGNRIKVDDSSPKLKQNSNNISKKQNSSRNDDTKVKKDTTIERPESLVVE 169
Query: 309 FVRFYYK-EKESINAKILKDVKFPLDLDVYELCTPELQERLTPMRNKFKELEDAKVQSSL 367
V + K++ + KD+ + + P + E L + + + + +SSL
Sbjct: 170 IVDLPSEVTKDTAEESVWKDIGLDQETGLSVTAIPIITETLDHAHEQEIKDQSLRFESSL 229
Query: 368 SSGNKSHGDSSKAKKKR 384
+ N+ HG SK ++++
Sbjct: 230 NEANELHGKLSKIQQEQ 246
>SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory
subunit Ekc1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 838
Score = 29.9 bits (64), Expect = 0.68
Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Query: 53 LRDDTWGNFKLTNNALVLVMGSKEEDVPAAPVEQTRFVEDMNEAELATAMDMPE 106
+ D+ W NF N LV + + ++EDM+E E+ A ++PE
Sbjct: 631 INDEKWQNF--VNKTLVETRNRDNQLLGGLEPSMVGYLEDMDEGEMLDANNLPE 682
>SPCC188.08c |ubp22|ubp5|ubiquitin C-terminal hydrolase
Ubp22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1108
Score = 29.9 bits (64), Expect = 0.68
Identities = 35/152 (23%), Positives = 58/152 (38%), Gaps = 11/152 (7%)
Query: 200 EIVRALQQRLPAAPMPDKNATRASVIEQYFGGTLDVELVCSEADEPPTHSEESF-LQLSC 258
E R LQ L + M D A + F G + + C + SE+ + +QL+
Sbjct: 297 EFNRVLQDNLERS-MRDTKVENA--LTNLFVGKMKSYIACVNVNFESARSEDYWDIQLNV 353
Query: 259 FISQDVKYLQSGLRSKMAEHITKMSQTLGRDAVYTKTSK----ISRLPAYLTVQFVRFYY 314
+ +K L+ RS + + D + +K P L +Q RF Y
Sbjct: 354 ---KGMKNLEDSFRSYIQVETLEGDNCYFADTYGFQEAKKGVIFESFPPILHLQLKRFEY 410
Query: 315 KEKESINAKILKDVKFPLDLDVYELCTPELQE 346
+ + KI +FPL+ D +PE +
Sbjct: 411 DFERDMMIKINDRYEFPLEFDAKAFLSPEADQ 442
>SPAC23G3.08c |ubp7||ubiquitin C-terminal hydrolase
Ubp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 875
Score = 29.1 bits (62), Expect = 1.2
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 107 GLINLGNTCYMNATVQCLKTVPELRNAL--LNYDKSGELTAALSET 150
GL NLG TC+ N+T+Q L L + + Y S + L+++
Sbjct: 209 GLKNLGATCFFNSTLQVLCACEALHDVISPFQYSHSSVIVRKLTKS 254
>SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 368
Score = 28.3 bits (60), Expect = 2.1
Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 19 EVNTDDEPVLFKAQIFALTGVQPERQKVVCKGVTLRDD-TWGNFKLTNNALVLVMGSKEE 77
+V+ D + K +I + ERQK++ G L DD T G + + ++ M S+ +
Sbjct: 17 DVSADTKISELKEKIQTQQNYEVERQKLIYSGRILADDKTVGEYNIKEQDFIVCMVSRPK 76
Query: 78 DVPAAP 83
+ P
Sbjct: 77 TSTSTP 82
>SPAC6F12.16c |mtr4||ATP-dependent RNA helicase, TRAMP complex
subunit Mtr4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1117
Score = 27.5 bits (58), Expect = 3.6
Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Query: 229 FGGTLDVELVCSEADEPPTHSEESFLQLSCFISQDVKYLQSGLRSKMAEHIT-KMSQTLG 287
FGG LD E P + EES + SQ +K + + E T K+ ++G
Sbjct: 2 FGGELDDAFGVFEGKVPKSLKEESKNSQNSQNSQKIKRTLTDKNASNQEQGTKKLESSVG 61
Query: 288 RDAVYTKTSKISRL 301
TK +KI L
Sbjct: 62 EQESATKRAKIENL 75
>SPAC23C4.18c |rad4|cut5, dre3|BRCT domain protein
Rad4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 648
Score = 27.5 bits (58), Expect = 3.6
Identities = 16/48 (33%), Positives = 24/48 (50%)
Query: 102 MDMPEGLINLGNTCYMNATVQCLKTVPELRNALLNYDKSGELTAALSE 149
+DMP I LG ++ K+ E + N +KSG+ AAL+E
Sbjct: 185 LDMPAEKIGLGAYVRLDPNTTEAKSYSENQKISKNKEKSGQSLAALAE 232
>SPBC19C2.04c |ubp11||ubiquitin C-terminal hydrolase
Ubp11|Schizosaccharomyces pombe|chr 2|||Manual
Length = 350
Score = 27.5 bits (58), Expect = 3.6
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 106 EGLINL-GNTCYMNATVQCLKTVPELRNALLNYDKSGELTAALSETVSALD 155
+GL N+ GN C++N +Q L + L L S L A L E + L+
Sbjct: 49 KGLYNVSGNDCFLNCVLQSLASQESLLEILKLRCSSSTLYATLYELLQKLN 99
>SPAC13A11.04c |ubp8||ubiquitin C-terminal hydrolase
Ubp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 449
Score = 27.1 bits (57), Expect = 4.8
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 107 GLINLGNTCYMNATVQCLKTVPELRN 132
G+ NLG TC+M+ +Q + P +RN
Sbjct: 146 GIQNLGATCFMSVILQSILHNPLVRN 171
>SPBC14C8.03 |fma2||methionine aminopeptidase Fma2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 27.1 bits (57), Expect = 4.8
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 338 ELCTPELQERLTPMRNKFKELEDAKVQSS-LSSGNKSHGDSSKAKKKR 384
E +LQE+L+ N E +D KV+ + + S+G+ K KKK+
Sbjct: 8 EATAKDLQEKLSLKENDVVE-DDGKVEENDAAEEGASNGEKKKKKKKK 54
>SPAC6C3.07 |mug68||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 515
Score = 27.1 bits (57), Expect = 4.8
Identities = 14/32 (43%), Positives = 15/32 (46%)
Query: 315 KEKESINAKILKDVKFPLDLDVYELCTPELQE 346
KE I K VKFP +LD CT E E
Sbjct: 267 KENNDILRKHKTSVKFPTNLDALNSCTMENHE 298
>SPBC713.02c |ubp21|ubpD, ubp15|ubiquitin C-terminal hydrolase
Ubp21|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1129
Score = 26.6 bits (56), Expect = 6.3
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 107 GLINLGNTCYMNATVQCL 124
GL N G TCYMN+ +Q L
Sbjct: 231 GLKNQGATCYMNSLLQSL 248
>SPAC1782.08c |rex3||exonuclease Rex3 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 540
Score = 26.2 bits (55), Expect = 8.4
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 379 KAKKKRVLPYWFENGMLTVCVYVV 402
K K ++ LPY ++N L++CV +V
Sbjct: 52 KVKIEKSLPYKYDNCKLSICVPIV 75
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.315 0.130 0.374
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,654,221
Number of Sequences: 5004
Number of extensions: 65850
Number of successful extensions: 225
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 198
Number of HSP's gapped (non-prelim): 28
length of query: 408
length of database: 2,362,478
effective HSP length: 74
effective length of query: 334
effective length of database: 1,992,182
effective search space: 665388788
effective search space used: 665388788
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 55 (26.2 bits)
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