Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002759-TA|BGIBMGA002759-PA|IPR001394|Peptidase C19,
ubiquitin carboxyl-terminal hydrolase 2, IPR000626|Ubiquitin
(408 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_05_0297 - 20578031-20578080,20578162-20578236,20578317-205784... 222 4e-58
08_02_1014 - 23586552-23587224,23587402-23587463,23587735-235879... 50 3e-06
08_02_1345 - 26286448-26286679,26287483-26288038,26288068-262883... 43 4e-04
08_02_1342 - 26268552-26268783,26270213-26271137,26271680-26272907 43 4e-04
08_02_1336 - 26233081-26233312,26233814-26234672,26235218-26236736 43 4e-04
02_05_0382 + 28491318-28491374,28492031-28492114,28492249-284922... 42 7e-04
08_02_1344 - 26280554-26280785,26281558-26282182,26282718-26284224 42 9e-04
06_03_0968 - 26402154-26403834,26404322-26404383,26404473-264046... 42 9e-04
11_04_0281 + 15733505-15733647,15734366-15734443,15734835-157350... 41 0.002
08_02_1343 - 26274788-26275019,26275972-26276611,26277174-262783... 41 0.002
07_03_0482 + 18589573-18589728,18589889-18590065,18590518-185906... 41 0.002
08_02_1340 - 26256768-26256999,26258105-26258774,26259273-262605... 40 0.005
08_02_1335 - 26226784-26227015,26227493-26228474,26229021-26230686 39 0.006
09_04_0652 - 19227686-19227926,19229368-19232294 39 0.008
07_01_0426 + 3239274-3239386,3239472-3239702,3242516-3242642,324... 39 0.008
03_01_0658 + 4818401-4818540,4818605-4819201,4819694-4819949,482... 38 0.011
09_04_0435 - 17545879-17546605,17546721-17546782,17547123-175473... 38 0.015
08_02_1338 - 26244928-26245159,26246420-26247374,26247921-26249187 37 0.025
12_02_1151 + 26488686-26488792,26488897-26489142,26490246-264903... 37 0.034
02_02_0236 + 8135641-8135795,8136167-8136557,8136640-8136931,813... 37 0.034
08_02_0067 - 11863092-11863104,11863432-11863547,11863610-118639... 36 0.044
07_03_1573 + 27829967-27830338,27830821-27831510,27831594-278317... 36 0.044
06_01_0588 - 4224348-4224516,4224674-4224767,4224872-4225490,422... 36 0.059
02_04_0319 - 22006550-22006952,22007260-22007441,22007522-220077... 36 0.059
10_01_0345 - 3811057-3811236,3811342-3811615,3811732-3812289,381... 35 0.14
03_01_0641 - 4697273-4697672,4697921-4698102,4698218-4698403,469... 35 0.14
09_06_0010 - 20193577-20193921,20194014-20194160,20194239-201944... 34 0.18
02_05_1059 + 33815979-33816235,33816467-33816732,33817149-338171... 34 0.24
04_04_0075 - 22542486-22542882,22543181-22543362,22543452-225436... 33 0.41
01_06_0864 - 32546696-32546803,32546881-32546961,32547134-325472... 33 0.41
07_03_0204 - 15150854-15151147,15152230-15153689,15154055-151542... 33 0.55
12_02_0381 + 18376045-18376114,18376270-18376420,18376524-183766... 32 0.72
11_06_0151 - 20643032-20643085,20643202-20643307,20643415-206434... 32 0.72
10_01_0307 + 3382432-3382608,3382690-3382863,3383600-3383695,338... 32 0.95
04_04_0681 - 27225526-27225802,27227163-27227524 31 1.3
01_06_0031 + 25760878-25761342 31 1.7
03_06_0285 + 32848085-32848988,32849057-32849245,32850136-328503... 29 5.1
05_03_0670 + 16819189-16819481,16821687-16821803,16822073-168221... 29 8.9
03_01_0340 - 2680860-2682197 29 8.9
>01_05_0297 -
20578031-20578080,20578162-20578236,20578317-20578416,
20578476-20578535,20578833-20578907,20578989-20579069,
20579596-20579665,20579769-20579833,20580008-20580116,
20580812-20580876,20580964-20581023,20582008-20582134,
20582215-20582315,20583209-20583316,20583429-20583464,
20583569-20583714,20585555-20585564
Length = 445
Score = 222 bits (543), Expect = 4e-58
Identities = 145/404 (35%), Positives = 205/404 (50%), Gaps = 53/404 (13%)
Query: 1 MPNVSVKVKWGKEMYPDVEVNTDDEPVLFKAQIFALTGVQPERQKVVCKGVTLRDDT-WG 59
MP VSVK W KE +P +E++T PV+FK Q++ LTGV PERQK++ KG L+DD W
Sbjct: 1 MPTVSVK--WQKETFPGIEIDTSQPPVVFKTQLYTLTGVPPERQKIMVKGGILKDDADWS 58
Query: 60 NFKLTNNALVLVMGSKEEDVPAAPVEQTRFVEDMNEAELATAMDMPEGLINLGNTCYMNA 119
+ + ++++G+ +E V A P + FVED+ E E A+ GL NLGNTCYMN+
Sbjct: 59 TLGVKDGQKLMMIGTADEIVKA-PEKGPVFVEDLPEEEQVVALGHSAGLYNLGNTCYMNS 117
Query: 120 TVQCLKTVPELRNALLNY----------DKSGELTAALSETVSALDXXXXXXXXXXXXXX 169
T+QCL +VPEL++ALL+Y S LT A T LD
Sbjct: 118 TLQCLHSVPELKSALLSYSDNVRGNGVDQASHNLTVATRNTFGELD----QSVRPVAPLL 173
Query: 170 XXXXXXXXXXXXXXXXXXXXXQQDASECWTEIVRALQQRLPAAPMPDKNATRASVIEQYF 229
QQDA ECWT++V L Q L
Sbjct: 174 FLQTLRKKYPQFAQQQNNVYMQQDAEECWTQLVYTLSQTL-------------------- 213
Query: 230 GGTLDVELVCSEADEPPTHSEESFLQLSCFISQDVKYLQSGLRSKMAEHITKMSQTLGRD 289
T + + C+E+ E + ES L C IS DV +L GL+ + + K S +LGR
Sbjct: 214 --TSETRVHCAESGE-ESLERESVYSLKCHISHDVNHLHEGLKHGLKSELEKASPSLGRT 270
Query: 290 AVYTKTSKISRLPAYLTVQFVRFYYKEKESINAKILKDVKFPLDLDVYELCTPELQERLT 349
A+YT+ YLTVQFVRF++K + + AKIL+ V +PL+LDVY+ C+ EL+++L
Sbjct: 271 ALYTR--------EYLTVQFVRFFWKRESNQKAKILRKVDYPLELDVYDFCSDELKQKLQ 322
Query: 350 PMRNKFKELEDA----KVQSSLSSGNKSHGDSSKAKKKRVLPYW 389
R ++ E+A K Q SS ++ G S + PY+
Sbjct: 323 APRQMLRDAENAKFGLKAQGKASSSKENEGSSVSIQVACCDPYF 366
>08_02_1014 -
23586552-23587224,23587402-23587463,23587735-23587950,
23588125-23588209,23589232-23589389,23589505-23589625,
23590081-23590243,23590330-23590415,23590660-23590742,
23590816-23591677,23593266-23593693
Length = 978
Score = 50.4 bits (115), Expect = 3e-06
Identities = 71/336 (21%), Positives = 125/336 (37%), Gaps = 25/336 (7%)
Query: 83 PVEQTRFVEDMNEAELATAMDMPEGLINLGNTCYMNATVQCLKTVPELRNALLNYDKSGE 142
P E T F ++ P GL NLGN+CY NA +QCL L + LL S
Sbjct: 427 PSEPTHFPYELFIKLYEKVELQPFGLHNLGNSCYANAVLQCLMFTRPLTSYLLGGLHS-- 484
Query: 143 LTAALSETVSALDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQDASECWTEIV 202
+ E + Q+DA E +
Sbjct: 485 KNCSKKEWCFMCEFEKLVGEGRQGKIALSPTGILSHLPDIGSSFGPGKQEDAHEFLRYAI 544
Query: 203 RALQ---QRLPAAPMPDKNATRASVIEQYFGGTLDVELVCSEADEPPTHSEESFLQLSCF 259
A+Q + + ++++ FGG L ++ C+ D + E L L+
Sbjct: 545 DAMQSVCMKEARKSGTHRLHEETTLMQLIFGGYLRSKIRCTRCD-ATSEQHERILDLTVE 603
Query: 260 ISQDVKYLQSGLRSKMAEHIT------KMSQTLGRDAVYTKTSKISRLPAYLTVQFVRFY 313
I D+ L+ L + + K S+ + K + IS P LT+ R+
Sbjct: 604 IDGDISSLEGALERFTSTEVLDGDNKYKCSRCKSHERAKKKLT-ISEAPNVLTIALKRY- 661
Query: 314 YKEKESINAKILKDVKFPLDLDVYELCTPELQERLTPMRNKFKELEDAKVQSSLSSGN-- 371
+ KI K ++FP L++ +P+ + +P+ + + + + ++ SG+
Sbjct: 662 ---QSGKFGKINKAIRFPETLNLQRYMSPKADD-TSPVYSLYAVVVHHDIMNAAFSGHYV 717
Query: 372 ----KSHGDSSKAKKKRVLPYWFENGMLTVCVYVVL 403
+HG K +V P EN +++ C Y++L
Sbjct: 718 CYVKDTHGKWYKTDDSQVKPVSLEN-VMSKCAYMLL 752
>08_02_1345 -
26286448-26286679,26287483-26288038,26288068-26288358,
26288953-26290516
Length = 880
Score = 43.2 bits (97), Expect = 4e-04
Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 106 EGLINLGNTCYMNATVQCLKTVPELRNALLNYD-KSGELTAALSE 149
+G+ NLGNTCY+N+ +QCL + +LR +L D SG L AL +
Sbjct: 298 KGIPNLGNTCYLNSLMQCLLVLGKLRARMLGPDAPSGTLGTALHD 342
>08_02_1342 - 26268552-26268783,26270213-26271137,26271680-26272907
Length = 794
Score = 43.2 bits (97), Expect = 4e-04
Identities = 17/33 (51%), Positives = 25/33 (75%)
Query: 106 EGLINLGNTCYMNATVQCLKTVPELRNALLNYD 138
+G++NLGNTCY+N+ VQCL + +LR +L D
Sbjct: 193 KGILNLGNTCYLNSLVQCLLVLGKLRARMLGPD 225
>08_02_1336 - 26233081-26233312,26233814-26234672,26235218-26236736
Length = 869
Score = 43.2 bits (97), Expect = 4e-04
Identities = 22/44 (50%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 107 GLINLGNTCYMNATVQCLKTVPELRNALLNYD-KSGELTAALSE 149
G+ NLGNTCY+NA +QCL + +LR +L D SG + +AL E
Sbjct: 304 GIPNLGNTCYVNALLQCLFVLEKLRARMLASDAPSGFVGSALKE 347
>02_05_0382 +
28491318-28491374,28492031-28492114,28492249-28492272,
28492398-28492472,28493083-28493157,28493198-28493290,
28493332-28493409,28493690-28493767,28494084-28494147,
28494474-28494655,28494729-28495064,28495148-28495267,
28495434-28495923,28496240-28496502
Length = 672
Score = 42.3 bits (95), Expect = 7e-04
Identities = 43/164 (26%), Positives = 69/164 (42%), Gaps = 7/164 (4%)
Query: 191 QQDASECWTEIVRALQQRLPAAPMPDKNAT--RASVIEQYFGGTLDVELVCSEADEPPTH 248
Q+DA E ++ L + DK ++ S+++Q FGG L +L C E +
Sbjct: 223 QEDAHEFLRCLLDNLDKCTTDPKPKDKPSSFDEESIVKQVFGGRLKSKLTCCECGH-CSE 281
Query: 249 SEESFLQLSCFISQDVKYLQSGLRSKMAEHITKMSQTLGRDAVYTKTSKISRLPAYLTVQ 308
+ E FL LS I Q + + E I L + K K +L +
Sbjct: 282 TYEPFLDLSLEIDQADNLIDALESFTKLERIGDAEDKLNCEHCNAKVCKNKQLMLDRSPD 341
Query: 309 FVRFYYKEKESIN---AKILKDVKFPLDLDVYEL-CTPELQERL 348
V + K S++ KI K V +PL+LD+ C P++ + L
Sbjct: 342 VVAIHLKRFTSLDRSVEKIDKHVVYPLELDLKPFHCDPDINKEL 385
>08_02_1344 - 26280554-26280785,26281558-26282182,26282718-26284224
Length = 787
Score = 41.9 bits (94), Expect = 9e-04
Identities = 20/42 (47%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 107 GLINLGNTCYMNATVQCLKTVPELRNALLN-YDKSGELTAAL 147
G+ NLGNTCY+N+ VQCL + LR +L D +G L L
Sbjct: 302 GITNLGNTCYLNSLVQCLLALGRLRARMLRPEDTTGRLGTVL 343
>06_03_0968 -
26402154-26403834,26404322-26404383,26404473-26404682,
26404776-26404860,26405461-26405618,26405745-26405868,
26405955-26406123,26406202-26406287,26406379-26406467,
26406564-26406735,26407820-26408193
Length = 1069
Score = 41.9 bits (94), Expect = 9e-04
Identities = 53/242 (21%), Positives = 83/242 (34%), Gaps = 14/242 (5%)
Query: 104 MPEGLINLGNTCYMNATVQCLKTVPELRNALLNYDKSGELTAALSETVSALDXXXXXXXX 163
+P GL+N GN+C+ N +QCL L LL D S E + +
Sbjct: 202 LPCGLLNCGNSCFANVVLQCLSCTRPLAAYLLGMDHSRECYKRHEDWCFLCELQCHIQRA 261
Query: 164 XXXXXXXXXXXXXXXXXXXXXXXXXXXQQDASECWTEIVRALQ----QRLPAAPMPDKNA 219
Q+DA E + +Q D +
Sbjct: 262 SESMHPFAPKNILSHLPNIGGNLGFGRQEDAHEFMRFAIDKMQSACLDEFGGEKAVDPST 321
Query: 220 TRASVIEQYFGGTLDVELVCSEADEPPTHSEESFLQLSCFISQDVKYLQSGLRSKMAEHI 279
++I+ FGG L ++ C+ A ++ E+ + L+ I D L+ L A
Sbjct: 322 QETTLIQHIFGGRLQSQVQCT-ACGMVSNRYENMMDLTVEIHGDADSLEECLDKFTAVEW 380
Query: 280 TKMSQTLGRDAV--YTKTSK---ISRLPAYLTVQFVRFYYKEKESINAKILKDVKFPLDL 334
D Y K K + + P LT+ RF + K+ K V FP+ L
Sbjct: 381 LDGDNKYKCDGCSDYVKAQKRLTVYQAPNILTITLKRF----QSGRFGKLNKRVTFPMKL 436
Query: 335 DV 336
D+
Sbjct: 437 DL 438
>11_04_0281 +
15733505-15733647,15734366-15734443,15734835-15735077,
15735868-15736012,15736234-15736293,15736376-15736471,
15736651-15737067,15737824-15737964,15738043-15738213,
15738394-15738651,15738741-15738889,15739060-15739557,
15740147-15740420,15740631-15740696,15740891-15741057,
15741413-15741497,15741673-15741732
Length = 1016
Score = 41.1 bits (92), Expect = 0.002
Identities = 15/23 (65%), Positives = 19/23 (82%)
Query: 107 GLINLGNTCYMNATVQCLKTVPE 129
GL+NLGNTC+MN+ +QCL PE
Sbjct: 350 GLLNLGNTCFMNSAIQCLVHTPE 372
>08_02_1343 -
26274788-26275019,26275972-26276611,26277174-26278367,
26278515-26278701
Length = 750
Score = 40.7 bits (91), Expect = 0.002
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 106 EGLINLGNTCYMNATVQCLKTVPELRNALLNYD 138
+G+ NLGNTCY+N+ +QCL + LR +L D
Sbjct: 244 KGIPNLGNTCYLNSLLQCLLVLGRLRAGILGLD 276
>07_03_0482 +
18589573-18589728,18589889-18590065,18590518-18590688,
18590913-18591029,18591614-18591742,18592210-18592311,
18592412-18592498,18592585-18592638,18594880-18595016,
18595181-18595235,18596133-18596188,18596275-18596334,
18596442-18596529,18596634-18597371,18597451-18597511,
18598301-18598403,18599180-18599311,18599393-18599477
Length = 835
Score = 40.7 bits (91), Expect = 0.002
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 17 DVEVNTDDEPVLFKAQIFALTGVQPERQKVVCK--GVTLRDDTWGNFKLTNNALVLVMGS 74
+VE +T+ + + QIF+LT V PE QK+V + G + D T LV + G
Sbjct: 24 EVEYDTEHGLDILRLQIFSLTSVPPELQKIVVEADGSVVDDGTDLEAISEGLRLVAITGE 83
Query: 75 KEEDVPAAPVEQTRFVEDMNEAELA 99
+EE AA E R ++ ++ ELA
Sbjct: 84 EEEAEAAAAAEAAR-AQEKSDEELA 107
>08_02_1340 -
26256768-26256999,26258105-26258774,26259273-26260555,
26262403-26263499
Length = 1093
Score = 39.5 bits (88), Expect = 0.005
Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 107 GLINLGNTCYMNATVQCLKTVPELRNALL 135
G+ NLGNTCY+NA +QCL + +LR +L
Sbjct: 570 GMPNLGNTCYLNALLQCLLVLGKLRARIL 598
>08_02_1335 - 26226784-26227015,26227493-26228474,26229021-26230686
Length = 959
Score = 39.1 bits (87), Expect = 0.006
Identities = 17/32 (53%), Positives = 23/32 (71%)
Query: 107 GLINLGNTCYMNATVQCLKTVPELRNALLNYD 138
G+ NLGNTCY+NA +QCL + +LR +L D
Sbjct: 341 GMPNLGNTCYINALLQCLFVLGKLRARMLAPD 372
>09_04_0652 - 19227686-19227926,19229368-19232294
Length = 1055
Score = 38.7 bits (86), Expect = 0.008
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
Query: 55 DDTWGNFKLTNNALVLVMGSKEEDVPAAPVEQTRFVEDMNEAELATAMDMPEGLINLGNT 114
DD F L+ V + + E V A P E D + + + + GL NLGNT
Sbjct: 175 DDPTVAFCLSCEKEVSIEMPRIETVAAVPTEVAG-AADRDLGLVNSHGSVIRGLPNLGNT 233
Query: 115 CYMNATVQCLKTVPELRNALLNYD-KSGELTAALSE 149
C+ NA +Q L + LR+ +L D +G L +L +
Sbjct: 234 CFFNAVMQSLLALDRLRSKMLGPDVPTGALLMSLKK 269
>07_01_0426 +
3239274-3239386,3239472-3239702,3242516-3242642,
3242729-3242788,3242868-3242960,3243073-3243369,
3243450-3243761,3243857-3244114,3244227-3244375,
3244470-3245102,3245367-3245640,3245736-3245777,
3246332-3246586,3246700-3246711
Length = 951
Score = 38.7 bits (86), Expect = 0.008
Identities = 17/34 (50%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 107 GLINLGNTCYMNATVQCLKTVPELRNALL-NYDK 139
GL NLGNTC+MN+++QCL +L + L +YD+
Sbjct: 263 GLENLGNTCFMNSSIQCLAHTSKLVDYFLGDYDR 296
>03_01_0658 +
4818401-4818540,4818605-4819201,4819694-4819949,
4820038-4820723,4821009-4821147,4821378-4821514,
4821805-4822077,4822175-4822382,4822660-4822731,
4823230-4823460,4824269-4824532,4825127-4825268,
4825355-4825467
Length = 1085
Score = 38.3 bits (85), Expect = 0.011
Identities = 50/247 (20%), Positives = 87/247 (35%), Gaps = 21/247 (8%)
Query: 97 ELATAMDMPEGLINLGNTCYMNATVQCLKTVPELRNALLNYDKSGELTAALSETVSALDX 156
+L + + P GL NLG TCY N+ +QCL R + + L + + LD
Sbjct: 118 DLRDSTETPAGLTNLGATCYANSILQCLYMNTSFRLGIFS------LEPDILKMHPVLD- 170
Query: 157 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQDASECWTEIVRALQQRLPAAPMPD 216
QQD+ E T + L+ L + +P
Sbjct: 171 --QLARLFAQLHSSKMAFIDSAPFIKTLELDNGVQQDSHEFLTLFLSLLEGSLSHSKVPG 228
Query: 217 KNATRASVIEQYFGGTLDVELVCSEA--DEPPTHSEESFLQLSCFISQDVKYLQSGLRSK 274
++++ F G++ CS D + E F +L I + + L+ L
Sbjct: 229 AR----TIVQHLFRGSVSHVTRCSSCGRDSEASSKMEDFYELELNI-KGLNNLEQSLDDY 283
Query: 275 MAEHITK-----MSQTLGRDAVYTKTSKISRLPAYLTVQFVRFYYKEKESINAKILKDVK 329
++ ++ + T+ K+ LP + Q R+ + K + KI
Sbjct: 284 LSTEALDGENQYFCESCQKRVDATRCIKLRSLPPVVNFQLKRYVFLPKTTTKKKISSAFS 343
Query: 330 FPLDLDV 336
FP LD+
Sbjct: 344 FPGQLDM 350
>09_04_0435 -
17545879-17546605,17546721-17546782,17547123-17547335,
17547506-17547590,17547904-17548061,17548174-17548294,
17548765-17548927,17548973-17549097,17550800-17550888,
17550970-17551636,17552671-17552717,17553506-17553862
Length = 937
Score = 37.9 bits (84), Expect = 0.015
Identities = 14/20 (70%), Positives = 17/20 (85%)
Query: 105 PEGLINLGNTCYMNATVQCL 124
P GL+NLGN+CY NA +QCL
Sbjct: 378 PFGLVNLGNSCYANAVLQCL 397
>08_02_1338 - 26244928-26245159,26246420-26247374,26247921-26249187
Length = 817
Score = 37.1 bits (82), Expect = 0.025
Identities = 14/25 (56%), Positives = 19/25 (76%)
Query: 107 GLINLGNTCYMNATVQCLKTVPELR 131
G+ N GNTCY+NA +QCL + +LR
Sbjct: 206 GIPNFGNTCYLNAVLQCLLVLGKLR 230
Score = 33.5 bits (73), Expect = 0.31
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Query: 237 LVCSEADEPPTHSEESFLQLSCFISQDVKYLQSGLRSKMAEHITKMSQ--TLGRDAVYTK 294
L C++ D P H E + LS Q+ G R ++ H + +Q R+ K
Sbjct: 639 LECAQEDVPDCHLGEKPVNLSSGQCQNANTEDQGRRKQVNLHQVEENQYDQQDRNEGAIK 698
Query: 295 TSKISRLPAYLTVQFVR 311
TS IS+LP L +Q R
Sbjct: 699 TSLISKLPPVLVIQLKR 715
>12_02_1151 +
26488686-26488792,26488897-26489142,26490246-26490381,
26490502-26490561,26490648-26490740,26491421-26491663,
26491828-26491968,26492312-26492482,26492813-26492899,
26492954-26493211,26493300-26493445,26493535-26493922,
26493935-26494092,26494267-26494540,26494721-26494894
Length = 893
Score = 36.7 bits (81), Expect = 0.034
Identities = 15/24 (62%), Positives = 18/24 (75%)
Query: 107 GLINLGNTCYMNATVQCLKTVPEL 130
GL NLGNTC+MN+ VQCL +L
Sbjct: 272 GLDNLGNTCFMNSAVQCLAHTSKL 295
>02_02_0236 +
8135641-8135795,8136167-8136557,8136640-8136931,
8137117-8137271,8137363-8137451,8137623-8137967,
8139046-8139169,8139424-8139581,8139673-8139757,
8140094-8140306,8141314-8141375,8141466-8141951,
8142472-8142568
Length = 883
Score = 36.7 bits (81), Expect = 0.034
Identities = 16/31 (51%), Positives = 18/31 (58%)
Query: 105 PEGLINLGNTCYMNATVQCLKTVPELRNALL 135
P GL N GN+CY NA +QCL L LL
Sbjct: 352 PRGLFNCGNSCYANAVLQCLMCTKPLMIYLL 382
>08_02_0067 -
11863092-11863104,11863432-11863547,11863610-11863950,
11864978-11865331,11866055-11866150,11866812-11866980,
11867541-11867618,11867745-11867926,11868010-11868094,
11868545-11868648,11869510-11869590,11870123-11870240,
11871299-11871430,11871635-11871788,11871838-11871917
Length = 700
Score = 36.3 bits (80), Expect = 0.044
Identities = 16/53 (30%), Positives = 30/53 (56%)
Query: 4 VSVKVKWGKEMYPDVEVNTDDEPVLFKAQIFALTGVQPERQKVVCKGVTLRDD 56
+ +K+K ++ VN L K +I +TG+ E+Q+++C+G L+DD
Sbjct: 103 IEIKIKTLDSQTYNLRVNKRVPVPLLKEKIATVTGILSEQQRLICRGRVLKDD 155
>07_03_1573 +
27829967-27830338,27830821-27831510,27831594-27831781,
27832286-27832318,27832364-27832605,27833178-27833320,
27833649-27833825,27834104-27834256,27834639-27834694,
27834998-27835157,27835301-27835348
Length = 753
Score = 36.3 bits (80), Expect = 0.044
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Query: 73 GSKEEDVP--AAPVEQTRFVEDMNEAELATAMDMPEGLINLGNTCYMNATVQCL 124
G D P AAPV++ V +N+ + +P GL N GN C++N+++Q L
Sbjct: 283 GGPAIDTPTTAAPVDE--LVTSLNKKDFRNKPLLPHGLKNTGNICFLNSSLQAL 334
>06_01_0588 -
4224348-4224516,4224674-4224767,4224872-4225490,
4225609-4225734,4225819-4226487,4226728-4226853,
4226940-4227266,4227366-4227439,4228469-4228583,
4228871-4229164
Length = 870
Score = 35.9 bits (79), Expect = 0.059
Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 5/50 (10%)
Query: 107 GLINLGNTCYMNATVQCLKTVPELRNALLNYDKSGELTAAL-SETVSALD 155
GL NLGNTCY+N+ +QCL T E Y +SG+ ++L SE+ SA +
Sbjct: 101 GLQNLGNTCYLNSVLQCL-TYTE---PFAAYLQSGKHKSSLPSESPSAYE 146
Score = 33.1 bits (72), Expect = 0.41
Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 9/128 (7%)
Query: 213 PMPDKNATRASVIEQYFGGTLDVELVCSEADEPPTHSEESFLQLSCFISQD---VKYLQS 269
P +A S++ + FGG L ++ C++ ++ + FL LS I + V+ LQ+
Sbjct: 138 PSESPSAYEKSLVHKIFGGRLRSQVKCTQCSH-CSNKFDPFLDLSLDIGKATSLVRALQN 196
Query: 270 GLRSKMAEHITK--MSQTLGRDAVYTKTSKISRLPAYLTVQFVRFY-YKEKESINAKILK 326
++ + K Q + V K I + P LT+ RF + +E I+ K+
Sbjct: 197 FTAEELLDGGEKQYQCQRCRKKVVAKKKFTIDKAPYVLTIHLKRFSPFNPREKIDKKV-- 254
Query: 327 DVKFPLDL 334
D + LDL
Sbjct: 255 DFQPMLDL 262
>02_04_0319 -
22006550-22006952,22007260-22007441,22007522-22007704,
22008144-22008242,22008999-22009115,22010476-22010739
Length = 415
Score = 35.9 bits (79), Expect = 0.059
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 7/117 (5%)
Query: 223 SVIEQYFGGTLDVELVCSEADEPPTHSEESFLQLSCFISQDVKYLQSGLRSKMAEHITKM 282
+++ + F G L E C D T +E+F LS + Q+ L S L+S + I
Sbjct: 214 TLVHRTFQGILTNETKCLMCDTI-TAKDETFFDLSIDVEQNSS-LTSCLKSFFSTEILNG 271
Query: 283 SQTLGRDAVYT-----KTSKISRLPAYLTVQFVRFYYKEKESINAKILKDVKFPLDL 334
D + K KI + P L + RF Y E+ S + K+ V +PL+L
Sbjct: 272 EDKFFCDKCSSLQEAHKRMKIKKAPHVLVIHLKRFKYVEQLSRHKKLSYRVVYPLEL 328
Score = 33.1 bits (72), Expect = 0.41
Identities = 15/31 (48%), Positives = 17/31 (54%)
Query: 107 GLINLGNTCYMNATVQCLKTVPELRNALLNY 137
GL N GNTCY N+ +Q L R LL Y
Sbjct: 73 GLENFGNTCYCNSVLQALYHCIPFREQLLEY 103
>10_01_0345 -
3811057-3811236,3811342-3811615,3811732-3812289,
3812602-3812747,3812930-3813097,3813896-3814003,
3814859-3815029,3816557-3816949,3817522-3817617,
3817715-3817774,3818600-3818744,3819296-3819520,
3820106-3820254
Length = 890
Score = 34.7 bits (76), Expect = 0.14
Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 107 GLINLGNTCYMNATVQCLKTVPELRNALLNYDKSGEL 143
GL NLGNTC+MN+ +Q L P L L D S E+
Sbjct: 312 GLHNLGNTCFMNSAIQSLVHTPPLVEYFLQ-DYSREI 347
>03_01_0641 -
4697273-4697672,4697921-4698102,4698218-4698403,
4699287-4699385,4700028-4700144,4700698-4700814
Length = 366
Score = 34.7 bits (76), Expect = 0.14
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 107 GLINLGNTCYMNATVQCLKTVPELRNALLNYDKSGELTAALSETV 151
GL N GNTCY N+ +Q L R LL Y + + T + + +
Sbjct: 24 GLENFGNTCYCNSVLQALYFCVPFREQLLEYYANNKSTGDVEDNM 68
Score = 30.3 bits (65), Expect = 2.9
Identities = 31/117 (26%), Positives = 48/117 (41%), Gaps = 7/117 (5%)
Query: 223 SVIEQYFGGTLDVELVCSEADEPPTHSEESFLQLSCFISQDVKYLQSGLRSKMAEHITKM 282
+++ + F G L E C E T +E+F LS I Q+ + S L++ +
Sbjct: 166 TLVHKCFQGILTNETRCLRC-ETVTDRDETFFDLSLDIEQNSS-ITSCLKNFSSTETLNA 223
Query: 283 SQTLGRDAVYT-----KTSKISRLPAYLTVQFVRFYYKEKESINAKILKDVKFPLDL 334
D + K KI + P L + RF Y E+ K+ V FPL+L
Sbjct: 224 EDKFFCDKCCSLQEAQKRMKIKKPPNILVIHLKRFKYIEQLGRYKKLSYRVVFPLEL 280
>09_06_0010 -
20193577-20193921,20194014-20194160,20194239-20194495,
20194619-20194826
Length = 318
Score = 34.3 bits (75), Expect = 0.18
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 1 MPNVSVKVKWGKEMYPDVEVNTDDEPVLFKAQIFALTGVQPERQKVVCK 49
+P + VKVK+ +Y ++ +N+ K Q+ A TG+ PE QK+V K
Sbjct: 45 VPTIRVKVKFNG-VYHEIYINSQASFGELKKQLSAPTGLHPEDQKIVYK 92
>02_05_1059 +
33815979-33816235,33816467-33816732,33817149-33817192,
33817363-33817539,33817638-33817964,33818067-33818192,
33818518-33818622,33818815-33820125,33820221-33820382,
33820416-33820517,33820549-33821272,33821358-33821451,
33821824-33821986
Length = 1285
Score = 33.9 bits (74), Expect = 0.24
Identities = 12/18 (66%), Positives = 15/18 (83%)
Query: 107 GLINLGNTCYMNATVQCL 124
GL N GNTCY+N+ +QCL
Sbjct: 139 GLQNFGNTCYLNSVLQCL 156
>04_04_0075 -
22542486-22542882,22543181-22543362,22543452-22543637,
22543959-22544057,22546198-22546314,22547739-22547855
Length = 365
Score = 33.1 bits (72), Expect = 0.41
Identities = 15/31 (48%), Positives = 17/31 (54%)
Query: 107 GLINLGNTCYMNATVQCLKTVPELRNALLNY 137
GL N GNTCY N+ +Q L R LL Y
Sbjct: 24 GLENFGNTCYCNSVLQALYFCIPFREKLLEY 54
Score = 31.1 bits (67), Expect = 1.7
Identities = 35/138 (25%), Positives = 57/138 (41%), Gaps = 12/138 (8%)
Query: 207 QRLPAAPM-PDKNATR----ASVIEQYFGGTLDVELVCSEADEPPTHSEESFLQLSCFIS 261
+++P P+ P N R +++ + F G L E C E T +E+F LS I
Sbjct: 145 EKVPNGPVQPLANGVRKEPPVTLVHKNFQGILTNETRCLRC-ETVTARDETFFDLSVDIE 203
Query: 262 QDVKYLQSGLRSKMAEHITKMSQTLGRDAVYT-----KTSKISRLPAYLTVQFVRFYYKE 316
Q+ + S L++ + D + K KI + P L + RF Y E
Sbjct: 204 QNSS-ITSCLKNFCSTETLNAEDKFFCDKCCSLQEAQKRMKIKKAPHILVIHLKRFKYIE 262
Query: 317 KESINAKILKDVKFPLDL 334
+ K+ V FP++L
Sbjct: 263 QLGRYKKLSYRVVFPMEL 280
>01_06_0864 -
32546696-32546803,32546881-32546961,32547134-32547250,
32548264-32548338,32548618-32548680,32549122-32549187,
32549254-32549325,32549403-32549504,32549588-32549765,
32549871-32549926,32551578-32551688,32551797-32551865,
32551960-32552068,32552176-32552327,32552398-32552475,
32554257-32554379,32555527-32555646,32555729-32555809,
32555881-32556027,32556112-32556190,32557223-32557297,
32558004-32558113,32558984-32559082,32559700-32559815,
32559914-32560022,32560098-32560229,32560389-32560591,
32561428-32561585,32561668-32561797,32562529-32562607,
32562806-32562829
Length = 1073
Score = 33.1 bits (72), Expect = 0.41
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 107 GLINLGNTCYMNATVQCLKTVPELRNALLNYDKSGELTAALS-ETVSA 153
GL N G TCYMN+ +Q L +P R N + ELT + +TV +
Sbjct: 173 GLKNQGATCYMNSLLQTLYHIPYFRKHSDNSVSTKELTKSFGWDTVDS 220
>07_03_0204 -
15150854-15151147,15152230-15153689,15154055-15154266,
15155123-15155275,15155569-15155630,15155733-15155785,
15156380-15156452,15156499-15156619,15156699-15156878,
15157333-15157391
Length = 888
Score = 32.7 bits (71), Expect = 0.55
Identities = 16/38 (42%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Query: 341 TPELQERLTPMRNKFKELEDA-KVQSSLSSGNKSHGDS 377
TPE+ ER+T + ++ +LEDA +QS+ + G +S GD+
Sbjct: 87 TPEVLERVTTIESEILQLEDAISIQSNDNLGLRSKGDA 124
>12_02_0381 +
18376045-18376114,18376270-18376420,18376524-18376681,
18378680-18378945,18379025-18379243,18379309-18379417,
18379488-18379603,18379935-18380033,18381447-18381556,
18382928-18383006,18383127-18383273,18383363-18383443,
18383529-18383648,18383902-18384024,18384276-18384353,
18384459-18384547,18384653-18384761,18385018-18385086,
18385200-18385310,18385657-18385712,18385808-18385985,
18386065-18386166,18386243-18386314,18386489-18386554,
18386674-18386739,18386853-18386936,18387080-18387196,
18388077-18388163,18389321-18389341
Length = 1050
Score = 32.3 bits (70), Expect = 0.72
Identities = 14/28 (50%), Positives = 18/28 (64%)
Query: 107 GLINLGNTCYMNATVQCLKTVPELRNAL 134
GL N G TCYMN+ +Q L +P R A+
Sbjct: 190 GLKNQGATCYMNSLLQTLYHIPYFRKAV 217
>11_06_0151 -
20643032-20643085,20643202-20643307,20643415-20643495,
20643588-20643715,20643829-20643903,20644853-20645374,
20646622-20646687,20647990-20648076,20648173-20648247,
20648705-20648821,20648932-20649015,20649152-20649217,
20649352-20649417,20650079-20650150,20650231-20650332,
20650428-20650605,20650700-20650755,20653159-20653269,
20653354-20653422,20653558-20653741,20653826-20653914,
20654070-20654147,20654509-20654631,20654755-20654874,
20654975-20655055,20655285-20655431,20655533-20655611,
20657114-20657223,20659138-20659236,20659467-20659582,
20659673-20659781,20659839-20660069,20660152-20660417,
20661349-20661506,20661601-20661751,20661897-20661966,
20662203-20662232
Length = 1451
Score = 32.3 bits (70), Expect = 0.72
Identities = 14/28 (50%), Positives = 18/28 (64%)
Query: 107 GLINLGNTCYMNATVQCLKTVPELRNAL 134
GL N G TCYMN+ +Q L +P R A+
Sbjct: 200 GLKNQGATCYMNSLLQTLYHIPYFRKAV 227
>10_01_0307 + 3382432-3382608,3382690-3382863,3383600-3383695,
3384640-3384709,3385878-3386002,3387128-3387268,
3387362-3387519,3387644-3387803,3390136-3390213,
3390326-3390385,3390473-3390528,3391886-3392090,
3394107-3394192,3394296-3394406,3394536-3394607,
3395453-3395538,3395730-3395878,3396107-3396250,
3396335-3396442,3396997-3397027,3397609-3397713,
3398283-3398407,3398807-3398950,3399073-3399177,
3400748-3400799,3401549-3401696,3401936-3402130,
3402404-3402647,3403152-3403259,3403887-3404034,
3405467-3405525,3405876-3405945,3407008-3407333,
3407666-3409204,3410526-3410733,3410870-3410906,
3411024-3411072,3411143-3411271
Length = 2025
Score = 31.9 bits (69), Expect = 0.95
Identities = 21/89 (23%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Query: 214 MPDKNATRASVIEQYFGGTLDVELVCSEADEPPTHSEE-SFLQLSCFISQDVKYLQSGLR 272
M T ++ Y L ++ +CS+A E +EE FL L+ F + + GL+
Sbjct: 1826 MKQTRFTEMLAVQIYRIAFLIMKFLCSQAKEAVRRAEELEFLDLAHFPELPMPDILHGLQ 1885
Query: 273 SKMAEHITKMSQTLGRDAVYTKTSKISRL 301
++ +T++ + A+ T+T ++ +L
Sbjct: 1886 DQVVSIVTEVLEANVSTALNTETERVCQL 1914
>04_04_0681 - 27225526-27225802,27227163-27227524
Length = 212
Score = 31.5 bits (68), Expect = 1.3
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 228 YFGGTLDVELVCSEADEPPTHSEESFLQLSCFISQD 263
++ L E++C E + PP+ S +L CF+S+D
Sbjct: 163 HYCAVLQSEMLCLELEPPPSPSPAPAARLHCFLSED 198
>01_06_0031 + 25760878-25761342
Length = 154
Score = 31.1 bits (67), Expect = 1.7
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 3 NVSVKVKWGKEMYPDVEVNTDDEPVLFKAQIFALTGVQPERQKVVCKGVTLRDD-TWGNF 61
NV V+ GKE+ D+++ D K ++ G+ P +Q+++ G L DD T ++
Sbjct: 78 NVKVRTLTGKEI--DIDIEMTDTVDRIKERVEEREGIPPVQQRLIYGGKQLADDKTAHDY 135
Query: 62 KL-TNNALVLVM 72
K+ + L LV+
Sbjct: 136 KIEAGSVLHLVL 147
>03_06_0285 +
32848085-32848988,32849057-32849245,32850136-32850311,
32850569-32851141
Length = 613
Score = 29.5 bits (63), Expect = 5.1
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 343 ELQERLTPMRNKFKELEDAKVQSSLSSGNKSHGDSSKAKKKRV 385
E + L +R + +ELE AK + ++ + S G SS KR+
Sbjct: 447 EAEFPLEDLRERLEELEKAKTEKKKAASSSSSGGSSGPANKRI 489
>05_03_0670 +
16819189-16819481,16821687-16821803,16822073-16822136,
16822566-16822724,16823014-16823165,16825137-16825272
Length = 306
Score = 28.7 bits (61), Expect = 8.9
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 64 TNNALVLVMGSKEEDVPAAPVEQTRFVEDMNEAELATAMDMPEGLI 109
T A V+V+G E++ AA VEQ R E+ A A A+ +P G++
Sbjct: 7 TGEAAVVVVGVAEQE--AAVVEQQREEEEQAAAVGAAAVLLPVGMV 50
>03_01_0340 - 2680860-2682197
Length = 445
Score = 28.7 bits (61), Expect = 8.9
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 339 LCTPELQERLTPMRNKFKELEDAKVQ-SSLSSGNKSHGDSSKAKKKRVLPYWFEN 392
+C+ L ERL+ +RN +E E+ V+ + +G S D K +K +L + ++
Sbjct: 47 VCSTCLMERLSSVRNPAEEEEEEIVEVGTADAGEGSSADHGKLRKTLMLLFQLDD 101
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.315 0.130 0.374
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,203,540
Number of Sequences: 37544
Number of extensions: 393937
Number of successful extensions: 1034
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 987
Number of HSP's gapped (non-prelim): 51
length of query: 408
length of database: 14,793,348
effective HSP length: 84
effective length of query: 324
effective length of database: 11,639,652
effective search space: 3771247248
effective search space used: 3771247248
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 61 (28.7 bits)
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