Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002759-TA|BGIBMGA002759-PA|IPR001394|Peptidase C19,
ubiquitin carboxyl-terminal hydrolase 2, IPR000626|Ubiquitin
(408 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83236-10|CAB05785.1| 489|Caenorhabditis elegans Hypothetical p... 215 6e-56
Z81468-2|CAB03876.1| 489|Caenorhabditis elegans Hypothetical pr... 215 6e-56
U32223-1|AAA74956.1| 489|Caenorhabditis elegans tRNA-guanine tr... 215 6e-56
Z81072-13|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical p... 48 9e-06
Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical p... 48 9e-06
AL132902-8|CAC14423.1| 664|Caenorhabditis elegans Hypothetical ... 40 0.004
Z47812-1|CAA87795.2| 1326|Caenorhabditis elegans Hypothetical pr... 39 0.007
AL132898-1|CAC14405.1| 357|Caenorhabditis elegans Hypothetical ... 39 0.007
AF100662-1|AAC68977.1| 900|Caenorhabditis elegans Hypothetical ... 39 0.007
Z29095-4|CAB54286.1| 410|Caenorhabditis elegans Hypothetical pr... 38 0.010
U50193-5|AAL32263.1| 1178|Caenorhabditis elegans Cytokinesis def... 38 0.017
Z68338-9|CAA92762.2| 2923|Caenorhabditis elegans Hypothetical pr... 37 0.022
Z68338-8|CAA92761.2| 2920|Caenorhabditis elegans Hypothetical pr... 37 0.022
Z54218-6|CAA90960.2| 2923|Caenorhabditis elegans Hypothetical pr... 37 0.022
Z54218-5|CAA90959.2| 2920|Caenorhabditis elegans Hypothetical pr... 37 0.022
U50193-6|AAL32262.1| 1175|Caenorhabditis elegans Cytokinesis def... 37 0.022
AF469173-1|AAL79016.1| 1175|Caenorhabditis elegans ubiquitin c-t... 37 0.022
AC091125-6|AAK27886.3| 474|Caenorhabditis elegans Hypothetical ... 36 0.039
Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical pr... 35 0.12
AF003386-4|AAO38631.1| 452|Caenorhabditis elegans Hypothetical ... 35 0.12
AF003386-3|AAO38630.1| 499|Caenorhabditis elegans Hypothetical ... 35 0.12
Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr... 34 0.16
Z47811-2|CAA87786.1| 1302|Caenorhabditis elegans Hypothetical pr... 33 0.28
U88180-7|AAB42297.2| 789|Caenorhabditis elegans Hypothetical pr... 33 0.48
Z79601-1|CAB01885.2| 716|Caenorhabditis elegans Hypothetical pr... 32 0.64
AL032631-12|CAB63341.1| 975|Caenorhabditis elegans Hypothetical... 32 0.64
U41007-15|AAQ01538.1| 564|Caenorhabditis elegans Kinesin-like p... 31 1.1
U41007-14|AAA82277.1| 690|Caenorhabditis elegans Kinesin-like p... 31 1.1
AB023577-1|BAB82459.1| 690|Caenorhabditis elegans Kinesin like ... 31 1.1
Z92835-4|CAE54910.1| 1135|Caenorhabditis elegans Hypothetical pr... 31 2.0
Z92835-3|CAB07397.1| 1130|Caenorhabditis elegans Hypothetical pr... 31 2.0
Z92835-2|CAB07396.1| 1133|Caenorhabditis elegans Hypothetical pr... 31 2.0
U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like p... 30 3.4
AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like ... 30 3.4
AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like ... 30 3.4
U97012-5|AAK39149.1| 515|Caenorhabditis elegans Hypothetical pr... 29 6.0
AL032657-15|CAA21734.1| 788|Caenorhabditis elegans Hypothetical... 29 6.0
AF067616-2|AAC19188.2| 551|Caenorhabditis elegans Deubiquitylat... 29 6.0
>Z83236-10|CAB05785.1| 489|Caenorhabditis elegans Hypothetical
protein C13B4.2 protein.
Length = 489
Score = 215 bits (524), Expect = 6e-56
Identities = 139/376 (36%), Positives = 192/376 (51%), Gaps = 17/376 (4%)
Query: 6 VKVKWGKEMYPDVEVNTDDEPVLFKAQIFALTGVQPERQKVVCKGVTLRDDTWGNFKLTN 65
V VKW KE Y VEV+T P++FKAQ+FALT V PERQKVV G TL DD W +
Sbjct: 4 VNVKWQKEKYV-VEVDTSAPPMVFKAQLFALTQVVPERQKVVIMGRTLGDDDWEGITIKE 62
Query: 66 NALVLVMGSKEEDVPAAP-VEQTRFVEDMNEAELATAMDMPEGLINLGNTCYMNATVQCL 124
N +++MGS E +P P V + + +AE +A+ P GL NLGNTCY N+ VQ L
Sbjct: 63 NMTIMMMGSVGE-IPKPPTVLEKKQANRDKQAEEISAL-YPCGLANLGNTCYFNSCVQML 120
Query: 125 KTVPELRNALLNYDKSGELTAALSETVSAL--DXXXXXXXXXXXXXXXXXXXXXXXXXXX 182
K V EL + E L ++ L
Sbjct: 121 KEVNELVLKPAEEMRIREHNDRLCHNLATLFNSLRDKDRALRSKGEPIKPFAAILTLSDS 180
Query: 183 XXXXXXXXQQDASECWTEIVRALQQRLPAAPMPDKNATRASVIEQYFGGTLDVELVCSEA 242
QQDA+EC I+ + + + IE F + + C E+
Sbjct: 181 FPQFEKFKQQDANECLVSIMSNVTRIYGLSGWN---------IESLFRIQTETTMKCLES 231
Query: 243 DEPPTHSEESFLQLSCFISQDVKYLQSGLRSKMAEHITKMSQTLGRDAVYTKTSKISRLP 302
DE E QL+C+++QDV++LQ+G+++ E +T+ S+ L RDA + K ++ISRLP
Sbjct: 232 DEVSEKKVERNNQLTCYVNQDVRFLQTGIKAGFEEEMTRNSEELNRDAKWQKNTQISRLP 291
Query: 303 AYLTVQFVRFYYKEKESINAKILKDVKFPLDLDVYELCTPELQERLTPMRNKFKELEDAK 362
YLTV RF+YKE NAKILK V+FP+ LD Y+LC+ EL+++L R K EDAK
Sbjct: 292 KYLTVNINRFFYKESTKTNAKILKSVQFPMQLDTYDLCSQELKDKLVARRADIKLEEDAK 351
Query: 363 VQSSLSSG--NKSHGD 376
++ L +K GD
Sbjct: 352 LERELRKKVLDKEQGD 367
>Z81468-2|CAB03876.1| 489|Caenorhabditis elegans Hypothetical
protein C13B4.2 protein.
Length = 489
Score = 215 bits (524), Expect = 6e-56
Identities = 139/376 (36%), Positives = 192/376 (51%), Gaps = 17/376 (4%)
Query: 6 VKVKWGKEMYPDVEVNTDDEPVLFKAQIFALTGVQPERQKVVCKGVTLRDDTWGNFKLTN 65
V VKW KE Y VEV+T P++FKAQ+FALT V PERQKVV G TL DD W +
Sbjct: 4 VNVKWQKEKYV-VEVDTSAPPMVFKAQLFALTQVVPERQKVVIMGRTLGDDDWEGITIKE 62
Query: 66 NALVLVMGSKEEDVPAAP-VEQTRFVEDMNEAELATAMDMPEGLINLGNTCYMNATVQCL 124
N +++MGS E +P P V + + +AE +A+ P GL NLGNTCY N+ VQ L
Sbjct: 63 NMTIMMMGSVGE-IPKPPTVLEKKQANRDKQAEEISAL-YPCGLANLGNTCYFNSCVQML 120
Query: 125 KTVPELRNALLNYDKSGELTAALSETVSAL--DXXXXXXXXXXXXXXXXXXXXXXXXXXX 182
K V EL + E L ++ L
Sbjct: 121 KEVNELVLKPAEEMRIREHNDRLCHNLATLFNSLRDKDRALRSKGEPIKPFAAILTLSDS 180
Query: 183 XXXXXXXXQQDASECWTEIVRALQQRLPAAPMPDKNATRASVIEQYFGGTLDVELVCSEA 242
QQDA+EC I+ + + + IE F + + C E+
Sbjct: 181 FPQFEKFKQQDANECLVSIMSNVTRIYGLSGWN---------IESLFRIQTETTMKCLES 231
Query: 243 DEPPTHSEESFLQLSCFISQDVKYLQSGLRSKMAEHITKMSQTLGRDAVYTKTSKISRLP 302
DE E QL+C+++QDV++LQ+G+++ E +T+ S+ L RDA + K ++ISRLP
Sbjct: 232 DEVSEKKVERNNQLTCYVNQDVRFLQTGIKAGFEEEMTRNSEELNRDAKWQKNTQISRLP 291
Query: 303 AYLTVQFVRFYYKEKESINAKILKDVKFPLDLDVYELCTPELQERLTPMRNKFKELEDAK 362
YLTV RF+YKE NAKILK V+FP+ LD Y+LC+ EL+++L R K EDAK
Sbjct: 292 KYLTVNINRFFYKESTKTNAKILKSVQFPMQLDTYDLCSQELKDKLVARRADIKLEEDAK 351
Query: 363 VQSSLSSG--NKSHGD 376
++ L +K GD
Sbjct: 352 LERELRKKVLDKEQGD 367
>U32223-1|AAA74956.1| 489|Caenorhabditis elegans tRNA-guanine
transglycosylase protein.
Length = 489
Score = 215 bits (524), Expect = 6e-56
Identities = 139/376 (36%), Positives = 192/376 (51%), Gaps = 17/376 (4%)
Query: 6 VKVKWGKEMYPDVEVNTDDEPVLFKAQIFALTGVQPERQKVVCKGVTLRDDTWGNFKLTN 65
V VKW KE Y VEV+T P++FKAQ+FALT V PERQKVV G TL DD W +
Sbjct: 4 VNVKWQKEKYV-VEVDTSAPPMVFKAQLFALTQVVPERQKVVIMGRTLGDDDWEGITIKE 62
Query: 66 NALVLVMGSKEEDVPAAP-VEQTRFVEDMNEAELATAMDMPEGLINLGNTCYMNATVQCL 124
N +++MGS E +P P V + + +AE +A+ P GL NLGNTCY N+ VQ L
Sbjct: 63 NMTIMMMGSVGE-IPKPPTVLEKKQANRDKQAEEISAL-YPCGLANLGNTCYFNSCVQML 120
Query: 125 KTVPELRNALLNYDKSGELTAALSETVSAL--DXXXXXXXXXXXXXXXXXXXXXXXXXXX 182
K V EL + E L ++ L
Sbjct: 121 KEVNELVLKPAEEMRIREHNDRLCHNLATLFNSLRDKDRALRSKGEPIKPFAAILTLSDS 180
Query: 183 XXXXXXXXQQDASECWTEIVRALQQRLPAAPMPDKNATRASVIEQYFGGTLDVELVCSEA 242
QQDA+EC I+ + + + IE F + + C E+
Sbjct: 181 FPQFEKFKQQDANECLVSIMSNVTRIYGLSGWN---------IESLFRIQTETTMKCLES 231
Query: 243 DEPPTHSEESFLQLSCFISQDVKYLQSGLRSKMAEHITKMSQTLGRDAVYTKTSKISRLP 302
DE E QL+C+++QDV++LQ+G+++ E +T+ S+ L RDA + K ++ISRLP
Sbjct: 232 DEVSEKKVERNNQLTCYVNQDVRFLQTGIKAGFEEEMTRNSEELNRDAKWQKNTQISRLP 291
Query: 303 AYLTVQFVRFYYKEKESINAKILKDVKFPLDLDVYELCTPELQERLTPMRNKFKELEDAK 362
YLTV RF+YKE NAKILK V+FP+ LD Y+LC+ EL+++L R K EDAK
Sbjct: 292 KYLTVNINRFFYKESTKTNAKILKSVQFPMQLDTYDLCSQELKDKLVARRADIKLEEDAK 351
Query: 363 VQSSLSSG--NKSHGD 376
++ L +K GD
Sbjct: 352 LERELRKKVLDKEQGD 367
>Z81072-13|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical
protein F30A10.10 protein.
Length = 1262
Score = 48.4 bits (110), Expect = 9e-06
Identities = 66/302 (21%), Positives = 106/302 (35%), Gaps = 19/302 (6%)
Query: 20 VNTDDEPVLF-KAQIFALTGVQP--ERQKVVCKGVTLRDDTWGNFKLTNNALVLVMGSKE 76
VNTD++ V F KA A Q K RD+ + +L ++ ++
Sbjct: 29 VNTDEDQVTFSKAMEVAKLDCQKCLLHDMHSSKSSNCRDNPFCIHRLGLEKFEKLITQEQ 88
Query: 77 EDVPAAPVEQTRFVEDMNEAELATAMDMPEGLINLGNTCYMNATVQCLKTVPELRNALLN 136
E A +Q R D+N D P GLIN GN CY+N+ +Q VPE R + +
Sbjct: 89 ETKEEAKKDQKR--RDLN--------DQPAGLINGGNFCYVNSFLQVWFNVPEFRQLIYD 138
Query: 137 YDKSGELTAALSETVSALDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQDASE 196
+ S + ++ QQD+ E
Sbjct: 139 FRPSENFVPPEAPRMNVQATMLALQDIFYTLQTTPFNETDKTSNLGKLLRLNSEQQDSQE 198
Query: 197 CWTEIVRALQQRLPAAPMPDKNATRASVIEQYFGGTLDVELVCSEADEPPTHSEESFLQL 256
+ AL++ LP P + R ++ F G +VC + EE+ + L
Sbjct: 199 FGLKFFNALERCLPDHPNGKETLKR---LKDLFTGETCTRIVCKCGQR--SEREETAISL 253
Query: 257 SCFISQDVKYLQSGLRSKMAEHITKMS-QTLGRDAVYTKTSKISRLPAYLTVQFVRFYYK 315
+ I L + EH+ + +K S +LP + +Q R+ Y
Sbjct: 254 TLNIEGYCTLLDALDAYFGEEHLDDFKCSKCNKTGDVSKQSDYVKLPPVIVIQLNRYKYT 313
Query: 316 EK 317
K
Sbjct: 314 SK 315
>Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical
protein F30A10.10 protein.
Length = 1262
Score = 48.4 bits (110), Expect = 9e-06
Identities = 66/302 (21%), Positives = 106/302 (35%), Gaps = 19/302 (6%)
Query: 20 VNTDDEPVLF-KAQIFALTGVQP--ERQKVVCKGVTLRDDTWGNFKLTNNALVLVMGSKE 76
VNTD++ V F KA A Q K RD+ + +L ++ ++
Sbjct: 29 VNTDEDQVTFSKAMEVAKLDCQKCLLHDMHSSKSSNCRDNPFCIHRLGLEKFEKLITQEQ 88
Query: 77 EDVPAAPVEQTRFVEDMNEAELATAMDMPEGLINLGNTCYMNATVQCLKTVPELRNALLN 136
E A +Q R D+N D P GLIN GN CY+N+ +Q VPE R + +
Sbjct: 89 ETKEEAKKDQKR--RDLN--------DQPAGLINGGNFCYVNSFLQVWFNVPEFRQLIYD 138
Query: 137 YDKSGELTAALSETVSALDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQDASE 196
+ S + ++ QQD+ E
Sbjct: 139 FRPSENFVPPEAPRMNVQATMLALQDIFYTLQTTPFNETDKTSNLGKLLRLNSEQQDSQE 198
Query: 197 CWTEIVRALQQRLPAAPMPDKNATRASVIEQYFGGTLDVELVCSEADEPPTHSEESFLQL 256
+ AL++ LP P + R ++ F G +VC + EE+ + L
Sbjct: 199 FGLKFFNALERCLPDHPNGKETLKR---LKDLFTGETCTRIVCKCGQR--SEREETAISL 253
Query: 257 SCFISQDVKYLQSGLRSKMAEHITKMS-QTLGRDAVYTKTSKISRLPAYLTVQFVRFYYK 315
+ I L + EH+ + +K S +LP + +Q R+ Y
Sbjct: 254 TLNIEGYCTLLDALDAYFGEEHLDDFKCSKCNKTGDVSKQSDYVKLPPVIVIQLNRYKYT 313
Query: 316 EK 317
K
Sbjct: 314 SK 315
>AL132902-8|CAC14423.1| 664|Caenorhabditis elegans Hypothetical
protein Y71A12B.9 protein.
Length = 664
Score = 39.5 bits (88), Expect = 0.004
Identities = 14/32 (43%), Positives = 23/32 (71%)
Query: 105 PEGLINLGNTCYMNATVQCLKTVPELRNALLN 136
P G+ N+GNTC+MNA +Q L ++ E R +++
Sbjct: 377 PRGMRNVGNTCFMNAVLQALASISEFREYIMS 408
>Z47812-1|CAA87795.2| 1326|Caenorhabditis elegans Hypothetical
protein T05H10.1 protein.
Length = 1326
Score = 38.7 bits (86), Expect = 0.007
Identities = 15/32 (46%), Positives = 22/32 (68%)
Query: 107 GLINLGNTCYMNATVQCLKTVPELRNALLNYD 138
GL+N TCY+N+ VQ L PE RNA+ +++
Sbjct: 89 GLVNQAMTCYLNSLVQSLYMTPEFRNAMYDWE 120
>AL132898-1|CAC14405.1| 357|Caenorhabditis elegans Hypothetical
protein Y59A8B.2 protein.
Length = 357
Score = 38.7 bits (86), Expect = 0.007
Identities = 15/24 (62%), Positives = 19/24 (79%)
Query: 107 GLINLGNTCYMNATVQCLKTVPEL 130
GL N+GNTC+M+AT+QCL P L
Sbjct: 25 GLFNMGNTCFMSATLQCLFQTPGL 48
>AF100662-1|AAC68977.1| 900|Caenorhabditis elegans Hypothetical
protein H34C03.2 protein.
Length = 900
Score = 38.7 bits (86), Expect = 0.007
Identities = 16/29 (55%), Positives = 19/29 (65%)
Query: 107 GLINLGNTCYMNATVQCLKTVPELRNALL 135
GL NLGNTC+M + QCL +P LR L
Sbjct: 276 GLSNLGNTCFMASAFQCLSNMPPLREYFL 304
>Z29095-4|CAB54286.1| 410|Caenorhabditis elegans Hypothetical
protein R10E11.3a protein.
Length = 410
Score = 38.3 bits (85), Expect = 0.010
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 107 GLINLGNTCYMNATVQCLKTVPELRNALLNYDKSGELTAALSETV 151
GL+N GNTCY N+ +Q L R +LNY ++ + + A + +
Sbjct: 28 GLVNFGNTCYCNSVIQALFFCRPFREKVLNYKQTLKKSGASKDNL 72
>U50193-5|AAL32263.1| 1178|Caenorhabditis elegans Cytokinesis defect
protein 3, isoformb protein.
Length = 1178
Score = 37.5 bits (83), Expect = 0.017
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 94 NEAELATAMDMPE--GLINLGNTCYMNATVQCLKTVPELRNALLNYD 138
+ A+L+ + P GL+N GN CY NA +QCL V L L+ D
Sbjct: 556 SNAQLSDSSGRPGAVGLVNYGNFCYRNAGIQCLARVSPLTQYFLDED 602
>Z68338-9|CAA92762.2| 2923|Caenorhabditis elegans Hypothetical protein
T24B8.7b protein.
Length = 2923
Score = 37.1 bits (82), Expect = 0.022
Identities = 57/244 (23%), Positives = 92/244 (37%), Gaps = 29/244 (11%)
Query: 107 GLINLGNTCYMNATVQCLKTVPELRN---ALLNYD---KSGELTAALSETVSALDXXXXX 160
G+ N G TCYMNA +Q L VP L AL N D + G+ TAAL + L
Sbjct: 1768 GMKNDGGTCYMNAMIQQLVHVPGLSRELIALQNIDPQLRWGDNTAAL---LCELQRVFAQ 1824
Query: 161 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQDASECWTEIVRALQQRLPAAPMPDKNAT 220
DA + ++ ++ L +P
Sbjct: 1825 LNFAQCQAIVPEGLWKEFRFEPDMPLNTKQHHDAIDFYSILLDKCDNVLKKLELP----- 1879
Query: 221 RASVIEQYFGGTLDVELVCSEADEPPTHSEESFLQLSCFISQDVKYLQSGLRSKMAEHIT 280
+ + F G E +C +E F +S +S D L+ L + +A H+
Sbjct: 1880 --PLFQNRFFGKYSYEKICYGCWHRYKSPDEEFNCISLALSGD--NLEEALENFLAAHVM 1935
Query: 281 KMSQTLGRDAVYTKTSKISR-----LPAYLTVQFVRFYYKEKESINAKILKD---VKFPL 332
+ + K + ++R LP+ +T+Q RF Y + +N I KD +FP
Sbjct: 1936 EGENAYHCEKCDEKKTTLNRTSFLELPSTMTIQLKRFTY---DLVNNMIRKDNQLFRFPF 1992
Query: 333 DLDV 336
++D+
Sbjct: 1993 EIDM 1996
>Z68338-8|CAA92761.2| 2920|Caenorhabditis elegans Hypothetical protein
T24B8.7a protein.
Length = 2920
Score = 37.1 bits (82), Expect = 0.022
Identities = 57/244 (23%), Positives = 92/244 (37%), Gaps = 29/244 (11%)
Query: 107 GLINLGNTCYMNATVQCLKTVPELRN---ALLNYD---KSGELTAALSETVSALDXXXXX 160
G+ N G TCYMNA +Q L VP L AL N D + G+ TAAL + L
Sbjct: 1765 GMKNDGGTCYMNAMIQQLVHVPGLSRELIALQNIDPQLRWGDNTAAL---LCELQRVFAQ 1821
Query: 161 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQDASECWTEIVRALQQRLPAAPMPDKNAT 220
DA + ++ ++ L +P
Sbjct: 1822 LNFAQCQAIVPEGLWKEFRFEPDMPLNTKQHHDAIDFYSILLDKCDNVLKKLELP----- 1876
Query: 221 RASVIEQYFGGTLDVELVCSEADEPPTHSEESFLQLSCFISQDVKYLQSGLRSKMAEHIT 280
+ + F G E +C +E F +S +S D L+ L + +A H+
Sbjct: 1877 --PLFQNRFFGKYSYEKICYGCWHRYKSPDEEFNCISLALSGD--NLEEALENFLAAHVM 1932
Query: 281 KMSQTLGRDAVYTKTSKISR-----LPAYLTVQFVRFYYKEKESINAKILKD---VKFPL 332
+ + K + ++R LP+ +T+Q RF Y + +N I KD +FP
Sbjct: 1933 EGENAYHCEKCDEKKTTLNRTSFLELPSTMTIQLKRFTY---DLVNNMIRKDNQLFRFPF 1989
Query: 333 DLDV 336
++D+
Sbjct: 1990 EIDM 1993
>Z54218-6|CAA90960.2| 2923|Caenorhabditis elegans Hypothetical protein
T24B8.7b protein.
Length = 2923
Score = 37.1 bits (82), Expect = 0.022
Identities = 57/244 (23%), Positives = 92/244 (37%), Gaps = 29/244 (11%)
Query: 107 GLINLGNTCYMNATVQCLKTVPELRN---ALLNYD---KSGELTAALSETVSALDXXXXX 160
G+ N G TCYMNA +Q L VP L AL N D + G+ TAAL + L
Sbjct: 1768 GMKNDGGTCYMNAMIQQLVHVPGLSRELIALQNIDPQLRWGDNTAAL---LCELQRVFAQ 1824
Query: 161 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQDASECWTEIVRALQQRLPAAPMPDKNAT 220
DA + ++ ++ L +P
Sbjct: 1825 LNFAQCQAIVPEGLWKEFRFEPDMPLNTKQHHDAIDFYSILLDKCDNVLKKLELP----- 1879
Query: 221 RASVIEQYFGGTLDVELVCSEADEPPTHSEESFLQLSCFISQDVKYLQSGLRSKMAEHIT 280
+ + F G E +C +E F +S +S D L+ L + +A H+
Sbjct: 1880 --PLFQNRFFGKYSYEKICYGCWHRYKSPDEEFNCISLALSGD--NLEEALENFLAAHVM 1935
Query: 281 KMSQTLGRDAVYTKTSKISR-----LPAYLTVQFVRFYYKEKESINAKILKD---VKFPL 332
+ + K + ++R LP+ +T+Q RF Y + +N I KD +FP
Sbjct: 1936 EGENAYHCEKCDEKKTTLNRTSFLELPSTMTIQLKRFTY---DLVNNMIRKDNQLFRFPF 1992
Query: 333 DLDV 336
++D+
Sbjct: 1993 EIDM 1996
>Z54218-5|CAA90959.2| 2920|Caenorhabditis elegans Hypothetical protein
T24B8.7a protein.
Length = 2920
Score = 37.1 bits (82), Expect = 0.022
Identities = 57/244 (23%), Positives = 92/244 (37%), Gaps = 29/244 (11%)
Query: 107 GLINLGNTCYMNATVQCLKTVPELRN---ALLNYD---KSGELTAALSETVSALDXXXXX 160
G+ N G TCYMNA +Q L VP L AL N D + G+ TAAL + L
Sbjct: 1765 GMKNDGGTCYMNAMIQQLVHVPGLSRELIALQNIDPQLRWGDNTAAL---LCELQRVFAQ 1821
Query: 161 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQDASECWTEIVRALQQRLPAAPMPDKNAT 220
DA + ++ ++ L +P
Sbjct: 1822 LNFAQCQAIVPEGLWKEFRFEPDMPLNTKQHHDAIDFYSILLDKCDNVLKKLELP----- 1876
Query: 221 RASVIEQYFGGTLDVELVCSEADEPPTHSEESFLQLSCFISQDVKYLQSGLRSKMAEHIT 280
+ + F G E +C +E F +S +S D L+ L + +A H+
Sbjct: 1877 --PLFQNRFFGKYSYEKICYGCWHRYKSPDEEFNCISLALSGD--NLEEALENFLAAHVM 1932
Query: 281 KMSQTLGRDAVYTKTSKISR-----LPAYLTVQFVRFYYKEKESINAKILKD---VKFPL 332
+ + K + ++R LP+ +T+Q RF Y + +N I KD +FP
Sbjct: 1933 EGENAYHCEKCDEKKTTLNRTSFLELPSTMTIQLKRFTY---DLVNNMIRKDNQLFRFPF 1989
Query: 333 DLDV 336
++D+
Sbjct: 1990 EIDM 1993
>U50193-6|AAL32262.1| 1175|Caenorhabditis elegans Cytokinesis defect
protein 3, isoforma protein.
Length = 1175
Score = 37.1 bits (82), Expect = 0.022
Identities = 16/32 (50%), Positives = 19/32 (59%)
Query: 107 GLINLGNTCYMNATVQCLKTVPELRNALLNYD 138
GL+N GN CY NA +QCL V L L+ D
Sbjct: 568 GLVNYGNFCYRNAGIQCLARVSPLTQYFLDED 599
>AF469173-1|AAL79016.1| 1175|Caenorhabditis elegans ubiquitin
c-terminal hydrolase protein.
Length = 1175
Score = 37.1 bits (82), Expect = 0.022
Identities = 16/32 (50%), Positives = 19/32 (59%)
Query: 107 GLINLGNTCYMNATVQCLKTVPELRNALLNYD 138
GL+N GN CY NA +QCL V L L+ D
Sbjct: 568 GLVNYGNFCYRNAGIQCLARVSPLTQYFLDED 599
>AC091125-6|AAK27886.3| 474|Caenorhabditis elegans Hypothetical
protein Y67D2.2 protein.
Length = 474
Score = 36.3 bits (80), Expect = 0.039
Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 89 FVEDMNEAELATAMDMPEGLINLGNTCYMNATVQCLKTVP 128
F+ N E +++ +P GL N GNTCYMNA +Q L + P
Sbjct: 29 FLTSRNGEEASSSRLVP-GLANQGNTCYMNALLQGLASCP 67
>Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical
protein F07A11.4 protein.
Length = 1095
Score = 34.7 bits (76), Expect = 0.12
Identities = 16/29 (55%), Positives = 19/29 (65%)
Query: 107 GLINLGNTCYMNATVQCLKTVPELRNALL 135
GL N+GNTC+MNA +Q L ELR L
Sbjct: 424 GLRNIGNTCFMNAVLQMLVNNIELREYFL 452
>AF003386-4|AAO38631.1| 452|Caenorhabditis elegans Hypothetical
protein F59E12.6b protein.
Length = 452
Score = 34.7 bits (76), Expect = 0.12
Identities = 16/53 (30%), Positives = 28/53 (52%)
Query: 95 EAELATAMDMPEGLINLGNTCYMNATVQCLKTVPELRNALLNYDKSGELTAAL 147
E++ + G+ N ++C+++ VQ L VP+L + LLN+ L AL
Sbjct: 22 ESDTLAQSESSVGIFNSSSSCWLSCIVQLLIRVPQLESVLLNFTSMEYLNYAL 74
>AF003386-3|AAO38630.1| 499|Caenorhabditis elegans Hypothetical
protein F59E12.6a protein.
Length = 499
Score = 34.7 bits (76), Expect = 0.12
Identities = 16/53 (30%), Positives = 28/53 (52%)
Query: 95 EAELATAMDMPEGLINLGNTCYMNATVQCLKTVPELRNALLNYDKSGELTAAL 147
E++ + G+ N ++C+++ VQ L VP+L + LLN+ L AL
Sbjct: 69 ESDTLAQSESSVGIFNSSSSCWLSCIVQLLIRVPQLESVLLNFTSMEYLNYAL 121
>Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical
protein T28C6.9 protein.
Length = 1861
Score = 34.3 bits (75), Expect = 0.16
Identities = 35/155 (22%), Positives = 70/155 (45%), Gaps = 6/155 (3%)
Query: 233 LDVELVCSEADEPPTHSEESFLQLSCFISQDVKYLQSGLRSKMAEHITKMSQTLGRDAVY 292
L + + ++ + P S+++ Q+ +++K L+ K A+ KM + L +A
Sbjct: 351 LPAQYLVQQSQQAPQSSQQNEDQVLREAHENLKRQVDELKKKNADFSEKMMR-LEMEAKL 409
Query: 293 TKTSKISRLPAYLTVQ-FVRFYYKEKESINAKILKDVKFPLDLDVYELCTPELQERLTPM 351
+ + A L ++ KE+E++ A D +L+++ L E+ E++ M
Sbjct: 410 SGELNVELGRAMLELEEHNELLQKEQEAVTAD---DTATSRELELHVLMVQEMTEQIASM 466
Query: 352 RNKFKELEDAKVQSSLSSGN-KSHGDSSKAKKKRV 385
K E+E KV+ KS +SK + +RV
Sbjct: 467 HEKNDEMEKLKVEQMKELEKWKSEAFTSKQEAQRV 501
>Z47811-2|CAA87786.1| 1302|Caenorhabditis elegans Hypothetical
protein K02C4.3 protein.
Length = 1302
Score = 33.5 bits (73), Expect = 0.28
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 107 GLINLGNTCYMNATVQCLKTVPELRNAL 134
GL N GNTC++N Q L ++P+ R+ L
Sbjct: 200 GLYNSGNTCWLNCLSQVLYSIPKFRSIL 227
>U88180-7|AAB42297.2| 789|Caenorhabditis elegans Hypothetical
protein T27A3.2 protein.
Length = 789
Score = 32.7 bits (71), Expect = 0.48
Identities = 12/21 (57%), Positives = 17/21 (80%)
Query: 107 GLINLGNTCYMNATVQCLKTV 127
GL+N G++CYMN+ +Q L TV
Sbjct: 320 GLVNTGSSCYMNSVLQALVTV 340
>Z79601-1|CAB01885.2| 716|Caenorhabditis elegans Hypothetical
protein K09A9.4 protein.
Length = 716
Score = 32.3 bits (70), Expect = 0.64
Identities = 12/18 (66%), Positives = 14/18 (77%)
Query: 107 GLINLGNTCYMNATVQCL 124
G +N GNTCYMNA +Q L
Sbjct: 183 GYLNFGNTCYMNAVLQLL 200
>AL032631-12|CAB63341.1| 975|Caenorhabditis elegans Hypothetical
protein Y106G6H.12 protein.
Length = 975
Score = 32.3 bits (70), Expect = 0.64
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 108 LINLGNTCYMNATVQCLKTVPEL 130
L N GN+CY N+T+Q L + P L
Sbjct: 284 LYNTGNSCYFNSTMQALSSCPSL 306
>U41007-15|AAQ01538.1| 564|Caenorhabditis elegans Kinesin-like
protein protein 10,isoform b protein.
Length = 564
Score = 31.5 bits (68), Expect = 1.1
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 325 LKDVKFPLDLDVYELCTPELQERLTPMRNKFKELEDAKVQSSLSSGNKSHGDSSKAKKK 383
LK+ L++D E ELQ+ + +RN+++E DA + S K SS+ K++
Sbjct: 373 LKNQTLQLEIDASEKRYQELQKETSALRNRYQENLDATILMQTPSA-KERRSSSRPKRR 430
>U41007-14|AAA82277.1| 690|Caenorhabditis elegans Kinesin-like
protein protein 10,isoform a protein.
Length = 690
Score = 31.5 bits (68), Expect = 1.1
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 325 LKDVKFPLDLDVYELCTPELQERLTPMRNKFKELEDAKVQSSLSSGNKSHGDSSKAKKK 383
LK+ L++D E ELQ+ + +RN+++E DA + S K SS+ K++
Sbjct: 373 LKNQTLQLEIDASEKRYQELQKETSALRNRYQENLDATILMQTPSA-KERRSSSRPKRR 430
>AB023577-1|BAB82459.1| 690|Caenorhabditis elegans Kinesin like
protein protein.
Length = 690
Score = 31.5 bits (68), Expect = 1.1
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 325 LKDVKFPLDLDVYELCTPELQERLTPMRNKFKELEDAKVQSSLSSGNKSHGDSSKAKKK 383
LK+ L++D E ELQ+ + +RN+++E DA + S K SS+ K++
Sbjct: 373 LKNQTLQLEIDASEKRYQELQKETSALRNRYQENLDATILMQTPSA-KERRSSSRPKRR 430
>Z92835-4|CAE54910.1| 1135|Caenorhabditis elegans Hypothetical
protein H19N07.2c protein.
Length = 1135
Score = 30.7 bits (66), Expect = 2.0
Identities = 15/36 (41%), Positives = 18/36 (50%)
Query: 107 GLINLGNTCYMNATVQCLKTVPELRNALLNYDKSGE 142
GL N G TCYMN+ +Q R A+ N D E
Sbjct: 194 GLRNQGATCYMNSILQSFYFTTGFRRAVYNMDVGTE 229
>Z92835-3|CAB07397.1| 1130|Caenorhabditis elegans Hypothetical
protein H19N07.2b protein.
Length = 1130
Score = 30.7 bits (66), Expect = 2.0
Identities = 15/36 (41%), Positives = 18/36 (50%)
Query: 107 GLINLGNTCYMNATVQCLKTVPELRNALLNYDKSGE 142
GL N G TCYMN+ +Q R A+ N D E
Sbjct: 194 GLRNQGATCYMNSILQSFYFTTGFRRAVYNMDVGTE 229
>Z92835-2|CAB07396.1| 1133|Caenorhabditis elegans Hypothetical
protein H19N07.2a protein.
Length = 1133
Score = 30.7 bits (66), Expect = 2.0
Identities = 15/36 (41%), Positives = 18/36 (50%)
Query: 107 GLINLGNTCYMNATVQCLKTVPELRNALLNYDKSGE 142
GL N G TCYMN+ +Q R A+ N D E
Sbjct: 194 GLRNQGATCYMNSILQSFYFTTGFRRAVYNMDVGTE 229
>U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like
protein protein 18 protein.
Length = 932
Score = 29.9 bits (64), Expect = 3.4
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 325 LKDVKFPLDLDVYELCTPELQERLTPMRNKFKELEDAKVQSSLSSGNKSHGDSSKAKKK 383
LK+ L+++ E ELQ+ + +RN+++E DA + S K SS+ K++
Sbjct: 443 LKNQTLQLEIEASEKRYQELQKETSALRNRYQENLDATILMQTPSA-KERRSSSRPKRR 500
>AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like
protein-18 protein.
Length = 932
Score = 29.9 bits (64), Expect = 3.4
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 325 LKDVKFPLDLDVYELCTPELQERLTPMRNKFKELEDAKVQSSLSSGNKSHGDSSKAKKK 383
LK+ L+++ E ELQ+ + +RN+++E DA + S K SS+ K++
Sbjct: 443 LKNQTLQLEIEASEKRYQELQKETSALRNRYQENLDATILMQTPSA-KERRSSSRPKRR 500
>AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like
protein KLP-18 protein.
Length = 930
Score = 29.9 bits (64), Expect = 3.4
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 325 LKDVKFPLDLDVYELCTPELQERLTPMRNKFKELEDAKVQSSLSSGNKSHGDSSKAKKK 383
LK+ L+++ E ELQ+ + +RN+++E DA + S K SS+ K++
Sbjct: 441 LKNQTLQLEIEASEKRYQELQKETSALRNRYQENLDATILMQTPSA-KERRSSSRPKRR 498
>U97012-5|AAK39149.1| 515|Caenorhabditis elegans Hypothetical
protein C04E6.5 protein.
Length = 515
Score = 29.1 bits (62), Expect = 6.0
Identities = 9/19 (47%), Positives = 16/19 (84%)
Query: 108 LINLGNTCYMNATVQCLKT 126
L+N GN+C++N+T+Q L +
Sbjct: 147 LVNTGNSCFLNSTMQALSS 165
>AL032657-15|CAA21734.1| 788|Caenorhabditis elegans Hypothetical
protein Y47H9C.5a protein.
Length = 788
Score = 29.1 bits (62), Expect = 6.0
Identities = 15/46 (32%), Positives = 21/46 (45%)
Query: 286 LGRDAVYTKTSKISRLPAYLTVQFVRFYYKEKESINAKILKDVKFP 331
L DA T+ RLPA +T Q +F + I ++L K P
Sbjct: 359 LANDAQSTERKDFRRLPALVTTQIFKFDCSKSSEICDELLDKTKLP 404
>AF067616-2|AAC19188.2| 551|Caenorhabditis elegans Deubiquitylating
with usp/ubp andotu domains protein 2 protein.
Length = 551
Score = 29.1 bits (62), Expect = 6.0
Identities = 9/24 (37%), Positives = 18/24 (75%)
Query: 103 DMPEGLINLGNTCYMNATVQCLKT 126
++ + L+N GN+CY N+T+Q + +
Sbjct: 31 ELRKRLVNTGNSCYYNSTLQAMSS 54
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.315 0.130 0.374
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,964,888
Number of Sequences: 27539
Number of extensions: 356577
Number of successful extensions: 1156
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1101
Number of HSP's gapped (non-prelim): 56
length of query: 408
length of database: 12,573,161
effective HSP length: 83
effective length of query: 325
effective length of database: 10,287,424
effective search space: 3343412800
effective search space used: 3343412800
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 61 (28.7 bits)
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