Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002758-TA|BGIBMGA002758-PA|IPR002048|Calcium-binding
EF-hand
(146 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|ch... 34 0.010
SPAC1687.11 |spb1||rRNA methyltransferase Spb1 |Schizosaccharomy... 27 0.87
SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyc... 27 1.2
SPAC17H9.06c |||conserved fungal protein|Schizosaccharomyces pom... 27 1.2
SPAC22F8.11 |plc1||phosphoinositide phospholipase C Plc1|Schizos... 27 1.5
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 27 1.5
SPAC328.08c |||tubulin specific chaperone cofactor C |Schizosacc... 25 4.6
SPBP4H10.20 |nhm1|DcpS|m7G|Schizosaccharomyces pombe|chr 2|||Manual 25 4.6
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 25 6.1
SPAC18B11.04 |ncs1||related to neuronal calcium sensor Ncs1|Schi... 25 6.1
SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharo... 25 6.1
SPBC6B1.03c |||Pal1 family protein|Schizosaccharomyces pombe|chr... 25 6.1
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 25 6.1
SPCC1183.08c |rpl101|rpl1-1, rpl10a-1|60S ribosomal protein L10a... 24 8.1
SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Sch... 24 8.1
SPBC30D10.18c |rpl102|rpl1-2, rpl10a-2|60S ribosomal protein L10... 24 8.1
>SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 150
Score = 33.9 bits (74), Expect = 0.010
Identities = 16/38 (42%), Positives = 22/38 (57%)
Query: 67 VLESLGDESTTEVRKEKFHAADTDMDGFITYDEFLSLV 104
VL SLG+ + E + ADTD DG I Y+EF ++
Sbjct: 110 VLTSLGERLSQEEVADMIREADTDGDGVINYEEFSRVI 147
Score = 27.9 bits (59), Expect = 0.66
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 67 VLESLGDESTTEVRKEKFHAADTDMDGFITYDEFLSLV 104
V+ SLG T ++ + D D +G I + EFL+++
Sbjct: 37 VMRSLGQSPTAAELQDMINEVDADGNGTIDFTEFLTMM 74
Score = 24.2 bits (50), Expect = 8.1
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 70 SLGDESTTEVRKEKFHAADTDMDGFITYDE 99
+L DE E R E F D D DG IT +E
Sbjct: 5 NLTDEQIAEFR-EAFSLFDRDQDGNITSNE 33
>SPAC1687.11 |spb1||rRNA methyltransferase Spb1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 802
Score = 27.5 bits (58), Expect = 0.87
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 19 PVKRKPICFYRQEDFTATGEPIKKVAEEQ-KAPLTDYDKLVDMFYKSSAVLESLGDESTT 77
P+ ++ + R++ PIKKV E Q + + +L + K+ + ES GD + +
Sbjct: 676 PITKEAVLALREKMKALNARPIKKVLEAQGRKKMRTIKRLQRVAKKAEGISES-GDMTES 734
Query: 78 EVRKE 82
E KE
Sbjct: 735 EKAKE 739
>SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 630
Score = 27.1 bits (57), Expect = 1.2
Identities = 15/50 (30%), Positives = 23/50 (46%)
Query: 78 EVRKEKFHAADTDMDGFITYDEFLSLVYNFDPKRDEQLSGLALLCNEVAE 127
E + E+F A + +M E LS+ DPK E+ + + N V E
Sbjct: 74 EAKMEEFKAVEREMKIKAFSKEGLSIASKLDPKEKEKQDTIQWISNAVEE 123
>SPAC17H9.06c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 601
Score = 27.1 bits (57), Expect = 1.2
Identities = 16/53 (30%), Positives = 28/53 (52%)
Query: 54 YDKLVDMFYKSSAVLESLGDESTTEVRKEKFHAADTDMDGFITYDEFLSLVYN 106
Y+KL + +S + LESL E + + + A +++ D FI DE ++ N
Sbjct: 327 YEKLHSLRNRSYSKLESLTSEKSDTLITKSELANESEEDDFIVDDEDTEVMMN 379
>SPAC22F8.11 |plc1||phosphoinositide phospholipase C
Plc1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 899
Score = 26.6 bits (56), Expect = 1.5
Identities = 22/95 (23%), Positives = 44/95 (46%), Gaps = 14/95 (14%)
Query: 14 RFFEYPVKRKPICFYRQE--DFTATGEPIKKVAEEQKAPLT--DYDKLVDMFYKSSAVLE 69
R E+ + +C ++ D++ P +K+ +EQ A L D ++ M + ++++
Sbjct: 275 RLNEFIIGLNLVCHQGEKMIDYSENLNPWEKLEKEQSAQLDLGDVHRMCQMLHLNASM-- 332
Query: 70 SLGDESTTEVRKEKFHAADTDMDGFITYDEFLSLV 104
E +E F AD D G ++++EF V
Sbjct: 333 --------EFLEETFQKADADHSGKLSFEEFQHFV 359
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 26.6 bits (56), Expect = 1.5
Identities = 19/88 (21%), Positives = 31/88 (35%)
Query: 31 EDFTATGEPIKKVAEEQKAPLTDYDKLVDMFYKSSAVLESLGDESTTEVRKEKFHAADTD 90
+D T +A P T SSA+ + +TEV E F TD
Sbjct: 293 QDSTTIDSTPSTIATSTLQPTTSSPITTSAPSLSSALPTTYPSSLSTEVEVEYFTKTITD 352
Query: 91 MDGFITYDEFLSLVYNFDPKRDEQLSGL 118
+TY + +Y + ++S +
Sbjct: 353 TSSIVTYSTGVETLYETETITSSEISSI 380
>SPAC328.08c |||tubulin specific chaperone cofactor C
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 259
Score = 25.0 bits (52), Expect = 4.6
Identities = 16/70 (22%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 4 QLSNLLSGLGRFFEYPVKRKPICFYRQEDFTATGEPIKKVAEEQKAPLTDYDKLVDMFYK 63
QL +L L + + R+P F R ++ +P+K + +AP ++ D Y
Sbjct: 66 QLVDLTRRLQQIRHDILPRQPFRFQRALHVKSSQKPVKNITVNAEAPEVYFEN--DTLYL 123
Query: 64 SSAVLESLGD 73
++ +++GD
Sbjct: 124 ANLKNQNIGD 133
>SPBP4H10.20 |nhm1|DcpS|m7G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 304
Score = 25.0 bits (52), Expect = 4.6
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 52 TDYDKLVDMFYKSSAVLESLGDESTTEVRKEKFHAADTDMDGFITY 97
TD + D+ YK +LE++ ++ TEV K+ F + F+ Y
Sbjct: 192 TDIASIRDLKYKHIPLLENIRNKVLTEVPKQ-FSVDKNQLKMFVHY 236
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 24.6 bits (51), Expect = 6.1
Identities = 9/19 (47%), Positives = 14/19 (73%)
Query: 121 LCNEVAENIQFVSNLTVGE 139
LC + +QF+++LTVGE
Sbjct: 3273 LCESASIIVQFITDLTVGE 3291
>SPAC18B11.04 |ncs1||related to neuronal calcium sensor
Ncs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 190
Score = 24.6 bits (51), Expect = 6.1
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 84 FHAADTDMDGFITYDEFLSLV 104
F D D +G I+YDE L +V
Sbjct: 105 FQLYDLDNNGLISYDEMLRIV 125
>SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2244
Score = 24.6 bits (51), Expect = 6.1
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 42 KVAEEQKAPLTDYDKLVDMFYKSSAVLES 70
+V +E+ A + +Y+KL D F ++VL S
Sbjct: 2160 RVQKERFASVDEYEKLKDSFIVDNSVLAS 2188
>SPBC6B1.03c |||Pal1 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 272
Score = 24.6 bits (51), Expect = 6.1
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 88 DTDMDGFITYDEFLSLVYNFDPKRDEQLSGLALLCNEVAENIQF 131
D+ +D + S +Y PKR + + CNE+AEN F
Sbjct: 74 DSGVDLLKLHSRSNSRIYEAKPKRVIKPKIAIIECNEMAENPPF 117
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 24.6 bits (51), Expect = 6.1
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 33 FTATGEPIKKVAEEQKAPLTDYDKLV 58
F AT +P+ KV ++ K P D +V
Sbjct: 312 FKATIDPVAKVLKDSKVPKADVHDIV 337
>SPCC1183.08c |rpl101|rpl1-1, rpl10a-1|60S ribosomal protein
L10a|Schizosaccharomyces pombe|chr 3|||Manual
Length = 216
Score = 24.2 bits (50), Expect = 8.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 106 NFDPKRDEQLSGLALLCNEVAENI 129
N+DP+RD++ SG L N N+
Sbjct: 39 NYDPQRDKRFSGTIKLPNVPRPNM 62
>SPAC688.11 |end4|sla2|Huntingtin-interacting protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1092
Score = 24.2 bits (50), Expect = 8.1
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 81 KEKFHAADTDMDGFITYDEFLSLVYNFDP 109
K FHA + +G Y E++SL DP
Sbjct: 118 KLSFHAQHPEFNGTFEYKEYISLRQVDDP 146
>SPBC30D10.18c |rpl102|rpl1-2, rpl10a-2|60S ribosomal protein
L10a|Schizosaccharomyces pombe|chr 2|||Manual
Length = 216
Score = 24.2 bits (50), Expect = 8.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 106 NFDPKRDEQLSGLALLCNEVAENI 129
N+DP+RD++ SG L N N+
Sbjct: 39 NYDPQRDKRFSGTIKLPNVPRPNM 62
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.137 0.391
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 677,541
Number of Sequences: 5004
Number of extensions: 26956
Number of successful extensions: 97
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 78
Number of HSP's gapped (non-prelim): 21
length of query: 146
length of database: 2,362,478
effective HSP length: 67
effective length of query: 79
effective length of database: 2,027,210
effective search space: 160149590
effective search space used: 160149590
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 50 (24.2 bits)
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