Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002758-TA|BGIBMGA002758-PA|IPR002048|Calcium-binding
EF-hand
(146 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81053-2|CAB02878.2| 202|Caenorhabditis elegans Hypothetical pr... 38 0.002
U40423-5|AAA81454.2| 156|Caenorhabditis elegans Unidentified vi... 33 0.082
AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin pr... 33 0.082
AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin pr... 33 0.082
Z70034-1|CAA93852.2| 171|Caenorhabditis elegans Hypothetical pr... 31 0.25
AJ512489-1|CAD54672.1| 171|Caenorhabditis elegans calmodulin-li... 31 0.25
AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical ... 31 0.44
U28731-1|AAA68298.1| 145|Caenorhabditis elegans Hypothetical pr... 30 0.58
Z48585-7|CAA88482.1| 160|Caenorhabditis elegans Hypothetical pr... 29 1.8
AC006651-7|AAX22287.1| 786|Caenorhabditis elegans Hypothetical ... 29 1.8
AC006651-6|AAF39868.1| 833|Caenorhabditis elegans Hypothetical ... 29 1.8
AB079299-1|BAB84566.1| 160|Caenorhabditis elegans troponin C pr... 29 1.8
Z81487-1|CAB03995.2| 288|Caenorhabditis elegans Hypothetical pr... 28 3.1
U28740-5|AAA68320.1| 229|Caenorhabditis elegans Hypothetical pr... 28 3.1
U41030-2|AAA82363.2| 191|Caenorhabditis elegans Neuronal calciu... 27 4.1
L33680-1|AAA85631.1| 191|Caenorhabditis elegans neuronal calciu... 27 4.1
Z81593-1|CAB04738.1| 608|Caenorhabditis elegans Hypothetical pr... 27 5.4
U41625-2|AAA83326.1| 264|Caenorhabditis elegans Hypothetical pr... 27 5.4
AC024858-1|AAF60872.2| 196|Caenorhabditis elegans Hypothetical ... 27 5.4
U70851-8|AAB09131.1| 164|Caenorhabditis elegans Calmodulin rela... 27 7.1
U50193-1|AAA91247.2| 532|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z77653-1|CAB01124.1| 218|Caenorhabditis elegans Hypothetical pr... 26 9.4
Z77134-4|CAE17934.1| 148|Caenorhabditis elegans Hypothetical pr... 26 9.4
Z73906-16|CAA98123.1| 722|Caenorhabditis elegans Hypothetical p... 26 9.4
Z72516-4|CAA96690.1| 722|Caenorhabditis elegans Hypothetical pr... 26 9.4
Z54282-1|CAA91056.1| 1203|Caenorhabditis elegans Hypothetical pr... 26 9.4
X58520-1|CAA41410.1| 1203|Caenorhabditis elegans zinc-finger pro... 26 9.4
X04259-1|CAA27814.1| 161|Caenorhabditis elegans cal-1 protein. 26 9.4
U46673-7|AAC48154.1| 811|Caenorhabditis elegans Beta-catenin/ar... 26 9.4
AL132865-13|CAB60609.1| 496|Caenorhabditis elegans Hypothetical... 26 9.4
AF098504-1|AAC67412.1| 364|Caenorhabditis elegans Btb and math ... 26 9.4
AF063646-1|AAC17424.1| 811|Caenorhabditis elegans beta-catenin/... 26 9.4
AC132211-3|AAN01436.1| 330|Caenorhabditis elegans Hypothetical ... 26 9.4
>Z81053-2|CAB02878.2| 202|Caenorhabditis elegans Hypothetical
protein E02A10.3 protein.
Length = 202
Score = 38.3 bits (85), Expect = 0.002
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 67 VLESLGDESTTEVRKEKFHAADTDMDGFITYDEFLSLVYNF 107
+L LGD + ++ E F+ AD D +G I YDEF +V N+
Sbjct: 155 ILRELGDITDNQIIDEIFNEADVDGNGVIDYDEFTYMVKNY 195
>U40423-5|AAA81454.2| 156|Caenorhabditis elegans Unidentified
vitellogenin-linkedtranscript protein 2 protein.
Length = 156
Score = 33.1 bits (72), Expect = 0.082
Identities = 15/36 (41%), Positives = 20/36 (55%)
Query: 66 AVLESLGDESTTEVRKEKFHAADTDMDGFITYDEFL 101
AV++ +G T + F AAD D DG I + EFL
Sbjct: 45 AVMQKMGQSPTEDELDAMFQAADKDCDGNIDFQEFL 80
>AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin
protein.
Length = 149
Score = 33.1 bits (72), Expect = 0.082
Identities = 14/38 (36%), Positives = 24/38 (63%)
Query: 67 VLESLGDESTTEVRKEKFHAADTDMDGFITYDEFLSLV 104
V+ +LG++ T E E AD D DG + Y+EF++++
Sbjct: 109 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMM 146
Score = 27.5 bits (58), Expect = 4.1
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 67 VLESLGDESTTEVRKEKFHAADTDMDGFITYDEFLSLV 104
V+ SLG T ++ + D D +G I + EFL+++
Sbjct: 36 VMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 73
>AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin
protein 1 protein.
Length = 149
Score = 33.1 bits (72), Expect = 0.082
Identities = 14/38 (36%), Positives = 24/38 (63%)
Query: 67 VLESLGDESTTEVRKEKFHAADTDMDGFITYDEFLSLV 104
V+ +LG++ T E E AD D DG + Y+EF++++
Sbjct: 109 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMM 146
Score = 27.5 bits (58), Expect = 4.1
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 67 VLESLGDESTTEVRKEKFHAADTDMDGFITYDEFLSLV 104
V+ SLG T ++ + D D +G I + EFL+++
Sbjct: 36 VMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 73
>Z70034-1|CAA93852.2| 171|Caenorhabditis elegans Hypothetical
protein C18E9.1 protein.
Length = 171
Score = 31.5 bits (68), Expect = 0.25
Identities = 13/34 (38%), Positives = 22/34 (64%)
Query: 67 VLESLGDESTTEVRKEKFHAADTDMDGFITYDEF 100
+++ + E+ +E+ +E F D D +GFIT DEF
Sbjct: 96 MMKRMNKENDSEMIREAFRVFDRDGNGFITADEF 129
>AJ512489-1|CAD54672.1| 171|Caenorhabditis elegans calmodulin-like
protein protein.
Length = 171
Score = 31.5 bits (68), Expect = 0.25
Identities = 13/34 (38%), Positives = 22/34 (64%)
Query: 67 VLESLGDESTTEVRKEKFHAADTDMDGFITYDEF 100
+++ + E+ +E+ +E F D D +GFIT DEF
Sbjct: 96 MMKRMNKENDSEMIREAFRVFDRDGNGFITADEF 129
>AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical
protein Y48B6A.6a protein.
Length = 687
Score = 30.7 bits (66), Expect = 0.44
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Query: 53 DYDKLVDMFYKSSAVLESLGDESTTEVRKEKFHAADTDMDGFITYDEF 100
D D +D F + ++E LG+ T KE D D DG I+ EF
Sbjct: 556 DQDSYID-FNELKRMMEKLGEAQTHIALKELIKKVDEDQDGKISQREF 602
>U28731-1|AAA68298.1| 145|Caenorhabditis elegans Hypothetical
protein F12A10.5 protein.
Length = 145
Score = 30.3 bits (65), Expect = 0.58
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 67 VLESLGDESTTEVRKEKFHAADTDMDGFITYDEFLSLV 104
V+ LG++ T KE D D DG I + EF++++
Sbjct: 105 VMCQLGEKLTETEAKEMIKQGDLDHDGMIDFQEFVNII 142
Score = 28.7 bits (61), Expect = 1.8
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 68 LESLGDESTTEVRKEKFHAADTDMDGFITYDEFLSLVYN--FDPKRDEQL 115
L LG++++ + AD D +G I DEFL+++ DPK + +L
Sbjct: 33 LLQLGEKASNSKIETMIEQADLDGNGCIDIDEFLNVLRRQICDPKEEREL 82
>Z48585-7|CAA88482.1| 160|Caenorhabditis elegans Hypothetical
protein ZK673.7 protein.
Length = 160
Score = 28.7 bits (61), Expect = 1.8
Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Query: 32 DFTATGEPIKKVAEEQKAPLTDYDKLVDMFYKSSA---VLESLGDESTTEVRKEKFHAAD 88
+F E + + EE + YDK + + S +L +L D + E E D
Sbjct: 82 NFVVNNENDEGLEEELREAFRLYDKEGNGYINVSDLRDILRALDDNVSEEELDEMIAEID 141
Query: 89 TDMDGFITYDEFLSLV 104
D G + +DEF+ ++
Sbjct: 142 ADGSGTVDFDEFMEMM 157
>AC006651-7|AAX22287.1| 786|Caenorhabditis elegans Hypothetical
protein H06I04.3c protein.
Length = 786
Score = 28.7 bits (61), Expect = 1.8
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Query: 15 FFEYPVKRKPICFYRQEDFTATGEPIKKVAEEQKAPLTDYD-KLVDMFYKSSAVLESLGD 73
F + PV ++ + YR+ P KKVAE + KL K+ +LE+
Sbjct: 678 FKQTPVTKEQVALYRERMREFNARPSKKVAEAKARKQKKMQRKLESAKKKAEGILENDQM 737
Query: 74 ESTTEVRKEK 83
E + +VR+ K
Sbjct: 738 EHSEKVREMK 747
>AC006651-6|AAF39868.1| 833|Caenorhabditis elegans Hypothetical
protein H06I04.3a protein.
Length = 833
Score = 28.7 bits (61), Expect = 1.8
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Query: 15 FFEYPVKRKPICFYRQEDFTATGEPIKKVAEEQKAPLTDYD-KLVDMFYKSSAVLESLGD 73
F + PV ++ + YR+ P KKVAE + KL K+ +LE+
Sbjct: 678 FKQTPVTKEQVALYRERMREFNARPSKKVAEAKARKQKKMQRKLESAKKKAEGILENDQM 737
Query: 74 ESTTEVRKEK 83
E + +VR+ K
Sbjct: 738 EHSEKVREMK 747
>AB079299-1|BAB84566.1| 160|Caenorhabditis elegans troponin C
protein.
Length = 160
Score = 28.7 bits (61), Expect = 1.8
Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Query: 32 DFTATGEPIKKVAEEQKAPLTDYDKLVDMFYKSSA---VLESLGDESTTEVRKEKFHAAD 88
+F E + + EE + YDK + + S +L +L D + E E D
Sbjct: 82 NFVVNNENDEGLEEELREAFRLYDKEGNGYINVSDLRDILRALDDNVSEEELDEMIAEID 141
Query: 89 TDMDGFITYDEFLSLV 104
D G + +DEF+ ++
Sbjct: 142 ADGSGTVDFDEFMEMM 157
>Z81487-1|CAB03995.2| 288|Caenorhabditis elegans Hypothetical
protein C54E10.2 protein.
Length = 288
Score = 27.9 bits (59), Expect = 3.1
Identities = 13/49 (26%), Positives = 23/49 (46%)
Query: 53 DYDKLVDMFYKSSAVLESLGDESTTEVRKEKFHAADTDMDGFITYDEFL 101
D+ + V + + E + ES + + F D D DG +TYD+ +
Sbjct: 210 DFTQSVFQLNEGKSGGEEINKESVQQRATKIFAELDCDRDGLVTYDDMI 258
>U28740-5|AAA68320.1| 229|Caenorhabditis elegans Hypothetical
protein B0563.7 protein.
Length = 229
Score = 27.9 bits (59), Expect = 3.1
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
Query: 40 IKKVAEEQKAPLTDYDKLVDMFYKSSAVLESLGDESTTEVRKEKFHAADTDMDGFITYDE 99
IK+V + + D+++ KS +++S +E + +E F D D +G IT +E
Sbjct: 93 IKEVDADGNGEI-DFEEFCACMKKSQNIVKSTNEE----LIRECFEIFDQDRNGIITENE 147
Query: 100 FLSLVYNFDPKRDE 113
F + F DE
Sbjct: 148 FKYIAKEFGDFDDE 161
>U41030-2|AAA82363.2| 191|Caenorhabditis elegans Neuronal calcium
sensor familyprotein 1 protein.
Length = 191
Score = 27.5 bits (58), Expect = 4.1
Identities = 12/21 (57%), Positives = 14/21 (66%)
Query: 84 FHAADTDMDGFITYDEFLSLV 104
F D D DGFIT +E LS+V
Sbjct: 105 FKLYDLDQDGFITRNEMLSIV 125
>L33680-1|AAA85631.1| 191|Caenorhabditis elegans neuronal calcium
binding protein protein.
Length = 191
Score = 27.5 bits (58), Expect = 4.1
Identities = 12/21 (57%), Positives = 14/21 (66%)
Query: 84 FHAADTDMDGFITYDEFLSLV 104
F D D DGFIT +E LS+V
Sbjct: 105 FKLYDLDQDGFITRNEMLSIV 125
>Z81593-1|CAB04738.1| 608|Caenorhabditis elegans Hypothetical
protein T20B3.1 protein.
Length = 608
Score = 27.1 bits (57), Expect = 5.4
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 67 VLESLGDESTTEVRKEKFHAADTDMDGFITYDEFLSLVYNFDPKR 111
VL +GD + VRK+ +H A T D + E L +N +P R
Sbjct: 318 VLLQVGDYVASRVRKQLWHPAKTGSDLHFEFPERLIFEFN-EPLR 361
>U41625-2|AAA83326.1| 264|Caenorhabditis elegans Hypothetical
protein K03A1.4a protein.
Length = 264
Score = 27.1 bits (57), Expect = 5.4
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Query: 68 LESLGDESTT-EVRKEKFHAADTDMDGFITYDEFLSLV 104
++ G + T E+R +H D D +G IT+DEF L+
Sbjct: 154 MQKCGQKPTKLELRLIMYHG-DNDQNGVITFDEFAHLM 190
Score = 27.1 bits (57), Expect = 5.4
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 73 DESTTEVRKEKFHAADTDMDGFITYDEFLSLV 104
++ T + +E+F D D DGFI E LS+V
Sbjct: 197 NQYTYDQLREQFDMFDKDKDGFIEKMEMLSIV 228
>AC024858-1|AAF60872.2| 196|Caenorhabditis elegans Hypothetical
protein Y71H2AL.1 protein.
Length = 196
Score = 27.1 bits (57), Expect = 5.4
Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Query: 59 DMFYKSSAVLESLG--DESTTEVRKEKFHAADTDMDGFITYDEFLSLVYNFD 108
D F A++ +G + + AD D DGFIT+ EF + + D
Sbjct: 134 DEFQDILAMMIGVGVPKDQVNSIADRTMREADRDGDGFITFQEFCNAMEKTD 185
>U70851-8|AAB09131.1| 164|Caenorhabditis elegans Calmodulin related
genes protein 3 protein.
Length = 164
Score = 26.6 bits (56), Expect = 7.1
Identities = 15/53 (28%), Positives = 27/53 (50%)
Query: 61 FYKSSAVLESLGDESTTEVRKEKFHAADTDMDGFITYDEFLSLVYNFDPKRDE 113
F + +++ + E+ +E+ +E F D D +G IT +EF + N DE
Sbjct: 84 FPEFCVMMKRIMKETDSEMIREAFKIFDRDGNGVITANEFKLFMINMGMCFDE 136
>U50193-1|AAA91247.2| 532|Caenorhabditis elegans Hypothetical
protein ZK328.4 protein.
Length = 532
Score = 26.6 bits (56), Expect = 7.1
Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 34 TATGEPIKKVAEEQKAPLTDYDKLVDMFYKSSAVLESLGDESTTEVRKEKFHAADTDMDG 93
T +P + E+K P+ D +VD Y S E +E +V E++ + +++
Sbjct: 186 TLREKPTEPAKPERKIPVKK-DFVVDDDYISEESSEEESEEEEEDVDDEEYRESSPEVEA 244
Query: 94 FITYDE 99
I+Y +
Sbjct: 245 KISYSD 250
>Z77653-1|CAB01124.1| 218|Caenorhabditis elegans Hypothetical
protein C13C12.1 protein.
Length = 218
Score = 26.2 bits (55), Expect = 9.4
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 71 LGDESTTEVRKEKFHAADTDMDGFITYDEFLSLVYN 106
+G + + E E D D DG I Y+EF+ ++ N
Sbjct: 182 MGMQFSEEEVDEMIKEVDVDGDGEIDYEEFVKMMSN 217
>Z77134-4|CAE17934.1| 148|Caenorhabditis elegans Hypothetical
protein R09H10.6 protein.
Length = 148
Score = 26.2 bits (55), Expect = 9.4
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 71 LGDESTTEVRKEKFHAADTDMDGFITYDEF 100
L D E + +FH DT+ DG +T E+
Sbjct: 58 LSDHPFLEHQSRRFHGFDTNGDGTVTKKEY 87
>Z73906-16|CAA98123.1| 722|Caenorhabditis elegans Hypothetical
protein T25G3.4 protein.
Length = 722
Score = 26.2 bits (55), Expect = 9.4
Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 8/98 (8%)
Query: 37 GEPIKKVAEEQKAPLTDYDKLVDMFY----KSSAVLESLGDESTTEVR--KEKFHAADTD 90
G+ + + EQ+A L +DM K +AV + + E++ KE+F D D
Sbjct: 580 GQELGWSSAEQRAQLEKARTFIDMEMGQNAKQTAVSNVALNLTKEEMQRAKERFQQLDKD 639
Query: 91 MDGFITYDEFLSLVYNFDPKRDEQLSGLALLCNEVAEN 128
G IT ++ + K DE++ L L NEV N
Sbjct: 640 RKGHITVNDLRKHFREHNQKIDERV--LHELLNEVDLN 675
>Z72516-4|CAA96690.1| 722|Caenorhabditis elegans Hypothetical
protein T25G3.4 protein.
Length = 722
Score = 26.2 bits (55), Expect = 9.4
Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 8/98 (8%)
Query: 37 GEPIKKVAEEQKAPLTDYDKLVDMFY----KSSAVLESLGDESTTEVR--KEKFHAADTD 90
G+ + + EQ+A L +DM K +AV + + E++ KE+F D D
Sbjct: 580 GQELGWSSAEQRAQLEKARTFIDMEMGQNAKQTAVSNVALNLTKEEMQRAKERFQQLDKD 639
Query: 91 MDGFITYDEFLSLVYNFDPKRDEQLSGLALLCNEVAEN 128
G IT ++ + K DE++ L L NEV N
Sbjct: 640 RKGHITVNDLRKHFREHNQKIDERV--LHELLNEVDLN 675
>Z54282-1|CAA91056.1| 1203|Caenorhabditis elegans Hypothetical protein
F52E10.1 protein.
Length = 1203
Score = 26.2 bits (55), Expect = 9.4
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 37 GEPIKKVAEEQKAPLTDYDKLV 58
G PI+K+ E QK DYD L+
Sbjct: 1032 GIPIRKMTEAQKGVALDYDTLM 1053
>X58520-1|CAA41410.1| 1203|Caenorhabditis elegans zinc-finger protein
protein.
Length = 1203
Score = 26.2 bits (55), Expect = 9.4
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 37 GEPIKKVAEEQKAPLTDYDKLV 58
G PI+K+ E QK DYD L+
Sbjct: 1032 GIPIRKMTEAQKGVALDYDTLM 1053
>X04259-1|CAA27814.1| 161|Caenorhabditis elegans cal-1 protein.
Length = 161
Score = 26.2 bits (55), Expect = 9.4
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 71 LGDESTTEVRKEKFHAADTDMDGFITYDEFLSLVYN 106
+G + + E E D D DG I Y+EF+ ++ N
Sbjct: 125 MGMQFSEEEVDEMIKEVDVDGDGEIDYEEFVKMMSN 160
>U46673-7|AAC48154.1| 811|Caenorhabditis elegans
Beta-catenin/armadillo relatedprotein 1 protein.
Length = 811
Score = 26.2 bits (55), Expect = 9.4
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 29 RQEDFTATGEPIKKVAEEQKAPLTDYDKLVDMFYKSS 65
R E ++GE + E+ PLTD D ++D + SS
Sbjct: 693 RSEALNSSGEVCEGAGEQWSTPLTD-DTMMDSYCNSS 728
>AL132865-13|CAB60609.1| 496|Caenorhabditis elegans Hypothetical
protein Y62E10A.16 protein.
Length = 496
Score = 26.2 bits (55), Expect = 9.4
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Query: 29 RQEDFTATGEPIKKVAEEQKAPLTDYDKLVDMFYKSSAVLESLGDESTTEVRKEKF 84
R E F E IK V + PL+ D++ + S++LE+ T E+ ++F
Sbjct: 290 RIEQFLTCSETIKTVKSDALIPLSIVDEMTSALW--SSLLENEESPKTLEMDDDEF 343
>AF098504-1|AAC67412.1| 364|Caenorhabditis elegans Btb and math
domain containingprotein 25 protein.
Length = 364
Score = 26.2 bits (55), Expect = 9.4
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Query: 40 IKKVAEEQKAPLTDYDKLVDMFYKSS---AVLESLGDESTTEVRKEKFHAADTDMDGFIT 96
+ K EE + D DK D F + AV+ +L T E + +AD DG +
Sbjct: 274 LTKTEEEIRKVFQDLDKDGDGFISVAELQAVMTNLQAWLTEEEIDDGIRSADISGDGLVD 333
Query: 97 YDEFLSL 103
+EF+ +
Sbjct: 334 LEEFIDV 340
>AF063646-1|AAC17424.1| 811|Caenorhabditis elegans
beta-catenin/armadillo homologBAR-1 protein.
Length = 811
Score = 26.2 bits (55), Expect = 9.4
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 29 RQEDFTATGEPIKKVAEEQKAPLTDYDKLVDMFYKSS 65
R E ++GE + E+ PLTD D ++D + SS
Sbjct: 693 RSEALNSSGEVCEGAGEQWSTPLTD-DTMMDSYCNSS 728
>AC132211-3|AAN01436.1| 330|Caenorhabditis elegans Hypothetical
protein Y108F1.5 protein.
Length = 330
Score = 26.2 bits (55), Expect = 9.4
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Query: 65 SAVLESLGDESTTEVRKEKFHAADTDMDGFITYDEFLSLVYNFDPKRDEQLSGLALLCN 123
S ESL E + + D D+D F +FL ++Y F D + G+ LL +
Sbjct: 195 STFFESLSLGGFYEAKLAEVPLYDIDVDDF---QKFLEVLYGFPVINDNTVEGILLLAD 250
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.318 0.137 0.391
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,623,416
Number of Sequences: 27539
Number of extensions: 148182
Number of successful extensions: 531
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 487
Number of HSP's gapped (non-prelim): 56
length of query: 146
length of database: 12,573,161
effective HSP length: 75
effective length of query: 71
effective length of database: 10,507,736
effective search space: 746049256
effective search space used: 746049256
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 55 (26.2 bits)
- SilkBase 1999-2023 -