GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002757-TA|BGIBMGA002757-PA|IPR013017|NHL, IPR000315|Zinc
finger, B-box, IPR007087|Zinc finger, C2H2-type, IPR001258|NHL repeat,
IPR011041|Soluble quinoprotein glucose dehydrogenase
         (721 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    26   0.79 
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    25   1.8  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    25   2.4  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    25   2.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    25   2.4  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    23   5.5  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    23   7.3  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 26.2 bits (55), Expect = 0.79
 Identities = 14/49 (28%), Positives = 22/49 (44%)

Query: 346 QVDYFSCMFKNMYITEERIMFIPPNYDLVDQLKRQCDVQSVPVNSMHSL 394
           +++ FS    N  +      F P NY LV  + +Q  +Q    N  HS+
Sbjct: 328 EIEMFSLQIANEQVEFNAAGFFPINYTLVFSVLKQYVMQQQVKNFRHSV 376


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 25.0 bits (52), Expect = 1.8
 Identities = 24/75 (32%), Positives = 31/75 (41%), Gaps = 10/75 (13%)

Query: 649 VCFTTSGNIIVSDFENHRLLMVDPTL-TKVLHC-VGREGSGIGELNRPSGIVTDDDGRIV 706
           VC+ TS  I   D      L VDPTL T +L+  VG    G+        +   DD  I 
Sbjct: 24  VCYFTSWTIYRPDNGKFTALDVDPTLCTHLLYAFVGLRDDGV--------VSVLDDWEIT 75

Query: 707 VADSKNHRVLVSHLN 721
             D  NH + +   N
Sbjct: 76  GLDEMNHLMSLREKN 90


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 24.6 bits (51), Expect = 2.4
 Identities = 8/13 (61%), Positives = 10/13 (76%)

Query: 195 FYCEACIIFICQE 207
           F+C A +IF CQE
Sbjct: 67  FFCTALVIFYCQE 79


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 24.6 bits (51), Expect = 2.4
 Identities = 8/13 (61%), Positives = 10/13 (76%)

Query: 195 FYCEACIIFICQE 207
           F+C A +IF CQE
Sbjct: 300 FFCTALVIFYCQE 312


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 24.6 bits (51), Expect = 2.4
 Identities = 8/13 (61%), Positives = 10/13 (76%)

Query: 195 FYCEACIIFICQE 207
           F+C A +IF CQE
Sbjct: 300 FFCTALVIFYCQE 312


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 1/47 (2%)

Query: 140 DLFCHECCHKVTSDCQLREHTLLPIHQISPIGARPNSVNNEKEVIYC 186
           D F + C  ++ + C++   TL  + +I   G R N   + K  I C
Sbjct: 186 DAFFYTCLIQIETQCEIVSDTLRNLDKIVTNGFR-NVAESRKIFIEC 231


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 13/40 (32%), Positives = 20/40 (50%)

Query: 556 YGRIIVIDKDNHRVQIFTSSGNFILKFGSFGKECGQFQYP 595
           YGR   +D+D+    +   S +  L+ G + KE G   YP
Sbjct: 292 YGRAWKMDEDSSISGVPPLSIDGALEAGPYSKEEGLLSYP 331


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.321    0.136    0.417 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,522
Number of Sequences: 317
Number of extensions: 6085
Number of successful extensions: 24
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 19
Number of HSP's gapped (non-prelim): 7
length of query: 721
length of database: 114,650
effective HSP length: 62
effective length of query: 659
effective length of database: 94,996
effective search space: 62602364
effective search space used: 62602364
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 46 (22.6 bits)