Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002756-TA|BGIBMGA002756-PA|IPR000073|Alpha/beta
hydrolase fold-1, IPR003089|Alpha/beta hydrolase
         (333 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                23   4.9  
AF213011-1|AAG43567.1|   62|Apis mellifera esterase A2 protein.        22   6.5  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    22   8.6  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   8.6  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    22   8.6  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   8.6  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 10/35 (28%), Positives = 14/35 (40%)

Query: 147 RTRPDISRKYNGYVNDADNVIPEYIYQCNSQTPSG 181
           R  P +S  Y+ YVN       ++   C    P G
Sbjct: 367 RQPPTLSESYSSYVNSMYASGAQFATPCTPSPPRG 401


>AF213011-1|AAG43567.1|   62|Apis mellifera esterase A2 protein.
          Length = 62

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 12/42 (28%), Positives = 17/42 (40%)

Query: 159 YVNDADNVIPEYIYQCNSQTPSGESAFHSLMTGFGWAKNPMV 200
           Y N  D   P   Y       SG S+FH +   +   K+ +V
Sbjct: 10  YTNSLDQSKPVMFYVHEGAFISGTSSFHEMRPDYLLPKDVVV 51


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 9/19 (47%), Positives = 12/19 (63%)

Query: 198 PMVKRIDKLSPALPITVLY 216
           PMVK+ID ++   P T  Y
Sbjct: 343 PMVKQIDTVAAEWPATTNY 361


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 14/69 (20%), Positives = 29/69 (42%), Gaps = 2/69 (2%)

Query: 105 RPAGAEKQQLPLWVRAIGTALQPLNPLWAVRAA--GPAGRWLVSRTRPDISRKYNGYVND 162
           R  G  K +  +W   I +       +  ++ A  G +  +  +RTR  ++     +V  
Sbjct: 390 RVQGVTKPRYMVWRETISSTATLGFRVEGIKLAHGGSSKDFKTTRTREQVTEALRRFVEG 449

Query: 163 ADNVIPEYI 171
             + +P+YI
Sbjct: 450 YPHAVPKYI 458


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 14/69 (20%), Positives = 29/69 (42%), Gaps = 2/69 (2%)

Query: 105 RPAGAEKQQLPLWVRAIGTALQPLNPLWAVRAA--GPAGRWLVSRTRPDISRKYNGYVND 162
           R  G  K +  +W   I +       +  ++ A  G +  +  +RTR  ++     +V  
Sbjct: 305 RVQGVTKPRYMVWRETISSTATLGFRVEGIKLAHGGSSKDFKTTRTREQVTEALRRFVEG 364

Query: 163 ADNVIPEYI 171
             + +P+YI
Sbjct: 365 YPHAVPKYI 373


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 14/69 (20%), Positives = 29/69 (42%), Gaps = 2/69 (2%)

Query: 105 RPAGAEKQQLPLWVRAIGTALQPLNPLWAVRAA--GPAGRWLVSRTRPDISRKYNGYVND 162
           R  G  K +  +W   I +       +  ++ A  G +  +  +RTR  ++     +V  
Sbjct: 624 RVQGVTKPRYMVWRETISSTATLGFRVEGIKLAHGGSSKDFKTTRTREQVTEALRRFVEG 683

Query: 163 ADNVIPEYI 171
             + +P+YI
Sbjct: 684 YPHAVPKYI 692


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.320    0.135    0.426 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,945
Number of Sequences: 429
Number of extensions: 4611
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 8
Number of HSP's gapped (non-prelim): 6
length of query: 333
length of database: 140,377
effective HSP length: 58
effective length of query: 275
effective length of database: 115,495
effective search space: 31761125
effective search space used: 31761125
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 44 (21.8 bits)